UBERON:0004339
From FANTOM5_SSTAR
Name: | calvarium | ||
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Definition: | "the upper domelike portion of the skull[MP]. the upper part of the cranium and surrounds the cranial cavity containing the brain. It is formed from frontal, parietal, temporal and occipital bones." [MP:0000076, Wikipedia:Calvaria_(skull)] | ||
Xrefs: |
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Synonyms: |
"calva" EXACT [FMA:52800] "calvaria" EXACT PLURAL [ZFA:0005606] "skullcap" RELATED [ZFA:0005606] "vault of skull" EXACT [EHDAA2:0002167] | ||
Comments: | calvaria part_of neurocranium in FMA, but no definition. MP class now merged. Gray's Anatomy's list includes the Ethmoid and Sphenoid bone in the Calvaria. Some books state that calvaria consists of just the frontal bone, parietal bone, temporal bone, and occipital bone. Note vault may not be precisely equivalent to calvaria |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0004765(skeletal element) |
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part_of: | UBERON:0003128(cranium) |
Children
part of: | UBERON:0001678 (temporal bone) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004339 (calvarium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr9:42206784..42206793, - |
1.87e-86 | FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p2@Tectb |
1.87e-86 | FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p2@Slc26a5 |
1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p2@Fscn2 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr3:35012425..35012439, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215319..89215330,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr15:89215319..89215330, + |
1.87e-86 | FFCP PHASE2:Mm9::chr11:102123554..102123566,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p4@BC030867 |
1.87e-86 | FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr5:28035962..28035983, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr1:172843796..172843799, - |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr12:13508046..13508055, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr3:81012915..81012923, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p4@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p1@Grxcr1 |
1.87e-86 | FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr18:66033526..66033539, - |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr16:93971357..93971363, - |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr17:13983179..13983190, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p5@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr13:37195838..37195870, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335903..31335921,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p2@Tmprss3 |
1.87e-86 | FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr11:11599532..11599539, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr3:154459184..154459195, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p4@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr13:78257518..78257522, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr1:16651649..16651655, + |
1.87e-86 | FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr14:102297728..102297742, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p7@Pkn3 |
1.87e-86 | FFCP PHASE1:Mm9::chr5:30710416..30710440,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p2@Otof |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr9:42206784..42206793, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p3@Gm1322 |
1.87e-86 | FFCP PHASE2:Mm9::chr1:93235228..93235249,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr1:93235228..93235249, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr15:12848147..12848162, + |
1.87e-86 | FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr4:154208086..154208123, + |
1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr14:102297728..102297742, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr9:50968647..50968668, - |
1.87e-86 | FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr11:8405038..8405048, - |
1.87e-86 | FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p4@Chrna10 |
1.87e-86 | FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p1@Tmc1 |
1.87e-86 | FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr14:47293496..47293510, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p2@9230102O04Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p11@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr8:13414266..13414279, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr13:78257454..78257465, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p1@Tomt |
1.87e-86 | FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p10@Otof |
1.87e-86 | FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr14:20649897..20649907, + |
1.87e-86 | FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr18:81327205..81327211, + |
1.87e-86 | FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p3@Tmprss3 |
1.87e-86 | FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr12:109905399..109905416, + |
1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr4:101908153..101908163, + |
1.87e-86 | FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr16:93971357..93971363, - |
1.87e-86 | FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr8:94180607..94180619, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p1@Kncn |
1.87e-86 | FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p7@A730017C20Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr8:13414289..13414295, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr9:66860888..66860899, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr2:53464178..53464186, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p11@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr2:73232344..73232356, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p2@Espnl |
1.87e-86 | FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p10@Sec11a |
1.87e-86 | FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr6:113251570..113251578, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr15:65641741..65641748, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p15@Mctp1 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p41@Cacnb2 |
1.87e-86 | FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p2@Slc26a5 |
1.87e-86 | FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p3@Epyc |
1.87e-86 | FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p3@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p11@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr11:114603036..114603048, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr3:154459184..154459195, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p3@Gm1322 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr11:4689837..4689845, - |
1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr2:73232344..73232356, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr1:172843885..172843890, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr7:139597684..139597691, + |
1.87e-86 | FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p1@Tmc1 |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr17:13983179..13983190, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr13:43699188..43699216, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr9:42207375..42207384, - |
1.87e-86 | FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr19:55256373..55256384, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p2@Strc |
1.87e-86 | FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr1:60561636..60561645, - |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr15:89215333..89215341, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr7:133957514..133957529, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr1:172843813..172843834, - |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr12:13572961..13572974, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p1@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr5:72652660..72652667, + |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr16:93971367..93971379, - |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr17:13983198..13983203, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p1@Otog |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p3@Tmprss3 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_a0c1b949a061bbcbc3b9b3e2beee00cc | p@chr3:154459231..154459240, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_a0c1b949a061bbcbc3b9b3e2beee00cc | p1@Otogl |