UBERON:0004904
From FANTOM5_SSTAR
Name: | nerve connecting eye with brain | ||
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Namespace: | FANTOM | ||
Definition: | "A nerve that connects the eye to the brain and carries the impulses formed by the retina to the visual cortex of the brain[BTO]." [BTO:0000966] | ||
Xrefs: |
| ||
Synonyms: |
"optic nerve" BROAD [BTO:0000966] "optic nerve (generic)" EXACT [] | ||
Comments: | for the vertebrate-specific structure, see UBERON:0000941 (cranial nerve II) | ||
Subset: | grouping_class |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0001021(nerve) |
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part_of: | UBERON:0002104(visual system) |
Children
is a: | UBERON:0000941 (cranial nerve II) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10277-104E7 (optic nerve, donor1)
- 10305-104H8
- 10333-105B9
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004904 (nerve connecting eye with brain), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
5.42e-195 | FFCP PHASE1:Hg19::chr12:57628762..57628773,-#_e7cfe1bc8f7c505cd20610af6a96eca7 | p@chr12:57628762..57628773, - |
5.42e-195 | FFCP PHASE2:Hg19::chr12:57628762..57628773,-#_e7cfe1bc8f7c505cd20610af6a96eca7 | p@chr12:57628762..57628773, - |
9.37e-99 | FFCP PHASE1:Hg19::chr4:127394496..127394500,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr4:127394496..127394500, - |
9.37e-99 | FFCP PHASE2:Hg19::chr4:127394496..127394500,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr4:127394496..127394500, - |
9.37e-99 | FFCP PHASE1:Hg19::chr2:188432107..188432111,+#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr2:188432107..188432111, + |
9.37e-99 | FFCP PHASE1:Hg19::chr5:151258901..151258902,+#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr5:151258901..151258902, + |
9.37e-99 | FFCP PHASE1:Hg19::chr18:74702556..74702558,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr18:74702556..74702558, - |
9.37e-99 | FFCP PHASE2:Hg19::chr5:151258901..151258902,+#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr5:151258901..151258902, + |
9.37e-99 | FFCP PHASE2:Hg19::chr18:74702556..74702558,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr18:74702556..74702558, - |
9.37e-99 | FFCP PHASE1:Hg19::chr5:149250331..149250335,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr5:149250331..149250335, - |
9.37e-99 | FFCP PHASE2:Hg19::chr1:62928606..62928608,+#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr1:62928606..62928608, + |
9.37e-99 | FFCP PHASE1:Hg19::chr14:105807545..105807554,+#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr14:105807545..105807554, + |
9.37e-99 | FFCP PHASE1:Hg19::chr18:25161980..25161984,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr18:25161980..25161984, - |
9.37e-99 | FFCP PHASE1:Hg19::chr2:60133192..60133194,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr2:60133192..60133194, - |
9.37e-99 | FFCP PHASE2:Hg19::chr5:149250331..149250335,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr5:149250331..149250335, - |
9.37e-99 | FFCP PHASE2:Hg19::chr2:188432107..188432111,+#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr2:188432107..188432111, + |
9.37e-99 | FFCP PHASE1:Hg19::chr7:15056365..15056368,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr7:15056365..15056368, - |
9.37e-99 | FFCP PHASE2:Hg19::chr7:15056365..15056368,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr7:15056365..15056368, - |
9.37e-99 | FFCP PHASE2:Hg19::chr14:105807545..105807554,+#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr14:105807545..105807554, + |
9.37e-99 | FFCP PHASE2:Hg19::chr2:60133192..60133194,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr2:60133192..60133194, - |
9.37e-99 | FFCP PHASE1:Hg19::chr1:62928606..62928608,+#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr1:62928606..62928608, + |
9.37e-99 | FFCP PHASE2:Hg19::chr18:25161980..25161984,-#_7e0d78cd1c75528ff3c6b23cf3b4439b | p@chr18:25161980..25161984, - |
2.55e-98 | FFCP PHASE2:Hg19::chr1:1361494..1361497,+#_284345d22cda2bdcf64430d9e57eebc0 | p7@TMEM88B |
2.55e-98 | FFCP PHASE2:Hg19::chr18:39859562..39859566,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr18:39859562..39859566, + |
2.55e-98 | FFCP PHASE1:Hg19::chr16:66170755..66170759,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr16:66170755..66170759, - |
2.55e-98 | FFCP PHASE1:Hg19::chr9:79519652..79519664,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr9:79519652..79519664, - |
2.55e-98 | FFCP PHASE1:Hg19::chr5:24554148..24554153,+#_284345d22cda2bdcf64430d9e57eebc0 | p1@ENST00000510391 |
2.55e-98 | FFCP PHASE1:Hg19::chr2:29484252..29484254,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr2:29484252..29484254, - |
2.55e-98 | FFCP PHASE2:Hg19::chr1:66713214..66713221,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr1:66713214..66713221, + |
2.55e-98 | FFCP PHASE1:Hg19::chr10:22768515..22768517,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr10:22768515..22768517, + |
2.55e-98 | FFCP PHASE2:Hg19::chr5:58471631..58471634,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr5:58471631..58471634, + |
2.55e-98 | FFCP PHASE2:Hg19::chr14:68527802..68527806,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr14:68527802..68527806, + |
2.55e-98 | FFCP PHASE1:Hg19::chr4:139501766..139501798,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr4:139501766..139501798, - |
2.55e-98 | FFCP PHASE2:Hg19::chr4:139501766..139501798,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr4:139501766..139501798, - |
2.55e-98 | FFCP PHASE1:Hg19::chr3:39827273..39827281,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr3:39827273..39827281, + |
2.55e-98 | FFCP PHASE2:Hg19::chr9:79519652..79519664,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr9:79519652..79519664, - |
2.55e-98 | FFCP PHASE2:Hg19::chr5:24554148..24554153,+#_284345d22cda2bdcf64430d9e57eebc0 | p1@ENST00000510391 |
2.55e-98 | FFCP PHASE1:Hg19::chr12:59444098..59444102,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr12:59444098..59444102, + |
2.55e-98 | FFCP PHASE1:Hg19::chr14:76447439..76447452,-#_284345d22cda2bdcf64430d9e57eebc0 | p18@TGFB3 |
2.55e-98 | FFCP PHASE2:Hg19::chr12:127992016..127992052,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr12:127992016..127992052, + |
2.55e-98 | FFCP PHASE2:Hg19::chr19:20382476..20382481,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr19:20382476..20382481, - |
2.55e-98 | FFCP PHASE2:Hg19::chr3:39827273..39827281,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr3:39827273..39827281, + |
2.55e-98 | FFCP PHASE1:Hg19::chr19:48479835..48479841,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr19:48479835..48479841, - |
2.55e-98 | FFCP PHASE1:Hg19::chr19:35978717..35978722,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr19:35978717..35978722, - |
2.55e-98 | FFCP PHASE1:Hg19::chr18:45498690..45498695,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr18:45498690..45498695, - |
2.55e-98 | FFCP PHASE1:Hg19::chr12:127992016..127992052,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr12:127992016..127992052, + |
2.55e-98 | FFCP PHASE2:Hg19::chr10:118927879..118927891,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr10:118927879..118927891, + |
2.55e-98 | FFCP PHASE1:Hg19::chr7:88535666..88535671,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr7:88535666..88535671, + |
2.55e-98 | FFCP PHASE1:Hg19::chr1:7709325..7709329,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr1:7709325..7709329, + |
2.55e-98 | FFCP PHASE2:Hg19::chr8:130597061..130597068,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr8:130597061..130597068, + |
2.55e-98 | FFCP PHASE1:Hg19::chr12:68567714..68567717,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr12:68567714..68567717, + |
2.55e-98 | FFCP PHASE2:Hg19::chr17:12935401..12935405,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr17:12935401..12935405, - |
2.55e-98 | FFCP PHASE1:Hg19::chr16:89970522..89970530,+#_284345d22cda2bdcf64430d9e57eebc0 | p9@TCF25 |
2.55e-98 | FFCP PHASE2:Hg19::chr7:88535666..88535671,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr7:88535666..88535671, + |
2.55e-98 | FFCP PHASE1:Hg19::chr4:130221053..130221071,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr4:130221053..130221071, + |
2.55e-98 | FFCP PHASE2:Hg19::chr21:22483836..22483880,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr21:22483836..22483880, + |
2.55e-98 | FFCP PHASE1:Hg19::chr1:44991346..44991355,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr1:44991346..44991355, + |
2.55e-98 | FFCP PHASE2:Hg19::chr14:85119696..85119699,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr14:85119696..85119699, + |
2.55e-98 | FFCP PHASE1:Hg19::chr14:106176908..106176916,-#_284345d22cda2bdcf64430d9e57eebc0 | p3@BC098451 |
2.55e-98 | FFCP PHASE2:Hg19::chr4:130221053..130221071,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr4:130221053..130221071, + |
2.55e-98 | FFCP PHASE1:Hg19::chr16:19586229..19586233,+#_284345d22cda2bdcf64430d9e57eebc0 | p12@C16orf62 |
2.55e-98 | FFCP PHASE2:Hg19::chr16:51174920..51174928,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr16:51174920..51174928, - |
2.55e-98 | FFCP PHASE2:Hg19::chr1:154942133..154942148,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr1:154942133..154942148, - |
2.55e-98 | FFCP PHASE2:Hg19::chr14:88034381..88034386,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr14:88034381..88034386, - |
2.55e-98 | FFCP PHASE1:Hg19::chr3:181328346..181328351,+#_284345d22cda2bdcf64430d9e57eebc0 | p22@SOX2-OT |
2.55e-98 | FFCP PHASE1:Hg19::chr11:2435409..2435443,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr11:2435409..2435443, - |
2.55e-98 | FFCP PHASE1:Hg19::chr16:55740953..55740956,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr16:55740953..55740956, + |
2.55e-98 | FFCP PHASE1:Hg19::chr2:165170873..165170919,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr2:165170873..165170919, - |
2.55e-98 | FFCP PHASE1:Hg19::chr3:131712314..131712315,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr3:131712314..131712315, - |
2.55e-98 | FFCP PHASE1:Hg19::chr14:78718132..78718157,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr14:78718132..78718157, + |
2.55e-98 | FFCP PHASE2:Hg19::chr3:181328346..181328351,+#_284345d22cda2bdcf64430d9e57eebc0 | p22@SOX2-OT |
2.55e-98 | FFCP PHASE2:Hg19::chr14:68589926..68589929,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr14:68589926..68589929, + |
2.55e-98 | FFCP PHASE1:Hg19::chr4:139590958..139590961,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr4:139590958..139590961, - |
2.55e-98 | FFCP PHASE2:Hg19::chr4:139590958..139590961,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr4:139590958..139590961, - |
2.55e-98 | FFCP PHASE1:Hg19::chr10:37679189..37679193,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr10:37679189..37679193, + |
2.55e-98 | FFCP PHASE1:Hg19::chr9:74167667..74167687,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr9:74167667..74167687, - |
2.55e-98 | FFCP PHASE1:Hg19::chr8:133945378..133945386,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr8:133945378..133945386, + |
2.55e-98 | FFCP PHASE2:Hg19::chr11:2435409..2435443,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr11:2435409..2435443, - |
2.55e-98 | FFCP PHASE1:Hg19::chr1:86911063..86911068,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr1:86911063..86911068, + |
2.55e-98 | FFCP PHASE2:Hg19::chr15:69850503..69850506,+#_284345d22cda2bdcf64430d9e57eebc0 | p3@ENST00000558781 |
2.55e-98 | FFCP PHASE1:Hg19::chrX:131884370..131884375,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chrX:131884370..131884375, - |
2.55e-98 | FFCP PHASE1:Hg19::chr12:78359873..78359882,+#_284345d22cda2bdcf64430d9e57eebc0 | p41@NAV3 |
2.55e-98 | FFCP PHASE2:Hg19::chr11:79291300..79291301,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr11:79291300..79291301, + |
2.55e-98 | FFCP PHASE2:Hg19::chr9:74167667..74167687,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr9:74167667..74167687, - |
2.55e-98 | FFCP PHASE1:Hg19::chr6:121951983..121951986,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr6:121951983..121951986, + |
2.55e-98 | FFCP PHASE2:Hg19::chr8:133945378..133945386,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr8:133945378..133945386, + |
2.55e-98 | FFCP PHASE1:Hg19::chr8:90420477..90420478,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr8:90420477..90420478, - |
2.55e-98 | FFCP PHASE2:Hg19::chr15:36402459..36402465,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr15:36402459..36402465, - |
2.55e-98 | FFCP PHASE1:Hg19::chr9:19514976..19514978,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr9:19514976..19514978, - |
2.55e-98 | FFCP PHASE2:Hg19::chr2:30144229..30144240,-#_284345d22cda2bdcf64430d9e57eebc0 | p10@ALK |
2.55e-98 | FFCP PHASE1:Hg19::chr2:242808350..242808356,+#_284345d22cda2bdcf64430d9e57eebc0 | p2@LOC100131763 |
2.55e-98 | FFCP PHASE2:Hg19::chr1:1413227..1413230,+#_284345d22cda2bdcf64430d9e57eebc0 | p2@ATAD3B |
2.55e-98 | FFCP PHASE2:Hg19::chr2:134472430..134472432,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr2:134472430..134472432, + |
2.55e-98 | FFCP PHASE2:Hg19::chr6:121951983..121951986,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr6:121951983..121951986, + |
2.55e-98 | FFCP PHASE1:Hg19::chr11:79291300..79291301,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr11:79291300..79291301, + |
2.55e-98 | FFCP PHASE2:Hg19::chr8:90420477..90420478,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr8:90420477..90420478, - |
2.55e-98 | FFCP PHASE1:Hg19::chr11:20791058..20791067,+#_284345d22cda2bdcf64430d9e57eebc0 | p10@NELL1 |
2.55e-98 | FFCP PHASE1:Hg19::chr2:192696669..192696673,+#_284345d22cda2bdcf64430d9e57eebc0 | p@chr2:192696669..192696673, + |
2.55e-98 | FFCP PHASE2:Hg19::chr9:19514976..19514978,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr9:19514976..19514978, - |
2.55e-98 | FFCP PHASE1:Hg19::chr8:22000519..22000525,-#_284345d22cda2bdcf64430d9e57eebc0 | p@chr8:22000519..22000525, - |