Personal tools

UBERON:0005388

From FANTOM5_SSTAR

Jump to: navigation, search

Name:photoreceptor array
Namespace:FANTOM
Definition:"An array of photoreceptors and any supporting cells found in an eye." [UBERON:cjm]
Xrefs:
links:
FBbt:00004200
Synonyms: "light-sensitive tissue" EXACT []

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0000479(tissue)
part_of:UBERON:0000970(eye)



Children

is a:UBERON:0000966 (retina)
part of:CL:0009004 (retinal cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005388 (photoreceptor array), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
1.07e-130FFCP PHASE1:Hg19::chr13:51913806..51913817,+#_8c2e955fbc2051acf8e4a8065ec68a80p2@SERPINE3
1.07e-130FFCP PHASE1:Hg19::chr13:99135322..99135327,-#_8c2e955fbc2051acf8e4a8065ec68a80p@chr13:99135322..99135327, -
1.07e-130FFCP PHASE2:Hg19::chr13:51913806..51913817,+#_8c2e955fbc2051acf8e4a8065ec68a80p2@SERPINE3
1.07e-130FFCP PHASE2:Hg19::chr13:99135322..99135327,-#_8c2e955fbc2051acf8e4a8065ec68a80p@chr13:99135322..99135327, -
5.17e-105FFCP PHASE2:Hg19::chr11:109990513..109990520,-#_0b705b087243fd5c3ef06df6e52596b8p@chr11:109990513..109990520, -
5.17e-105FFCP PHASE1:Hg19::chr11:109990513..109990520,-#_0b705b087243fd5c3ef06df6e52596b8p@chr11:109990513..109990520, -
1.51e-104FFCP PHASE2:Hg19::chr5:70308745..70308754,-#_998322b95d441682cae6dac23b52bef1p@chr5:70308745..70308754, -
1.51e-104FFCP PHASE1:Hg19::chr5:70308745..70308754,-#_998322b95d441682cae6dac23b52bef1p@chr5:70308745..70308754, -
4.11e-102FFCP PHASE2:Hg19::chr3:69928404..69928418,+#_7b1b2dc287c7ffd84f2dab4445dcc0d4p@chr3:69928404..69928418, +
4.11e-102FFCP PHASE1:Hg19::chr3:69928404..69928418,+#_7b1b2dc287c7ffd84f2dab4445dcc0d4p@chr3:69928404..69928418, +
1.83e-98FFCP PHASE1:Hg19::chr2:45166274..45166281,-#_3dda7500ac4420d5aefddb9405d34046p5@ENST00000437916
1.83e-98FFCP PHASE2:Hg19::chr11:61522820..61522823,+#_3dda7500ac4420d5aefddb9405d34046p9@C11orf9
1.83e-98FFCP PHASE1:Hg19::chr1:147150847..147150854,-#_3dda7500ac4420d5aefddb9405d34046p@chr1:147150847..147150854, -
1.83e-98FFCP PHASE2:Hg19::chr1:147150847..147150854,-#_3dda7500ac4420d5aefddb9405d34046p@chr1:147150847..147150854, -
1.83e-98FFCP PHASE2:Hg19::chr2:45166274..45166281,-#_3dda7500ac4420d5aefddb9405d34046p5@ENST00000437916
1.83e-98FFCP PHASE1:Hg19::chr11:61522820..61522823,+#_3dda7500ac4420d5aefddb9405d34046p9@C11orf9
7.0e-88FFCP PHASE1:Hg19::chr11:61522844..61522875,+#_b0ce7c373c138a8c3bcf9aa2aa48e115p2@C11orf9
7.0e-88FFCP PHASE2:Hg19::chr11:61522844..61522875,+#_b0ce7c373c138a8c3bcf9aa2aa48e115p2@C11orf9
1.37e-87FFCP PHASE2:Hg19::chr17:932340..932343,-#_010bb04ac2e04137df7d0b8181c2ef41p@chr17:932340..932343, -
1.37e-87FFCP PHASE1:Hg19::chr17:932340..932343,-#_010bb04ac2e04137df7d0b8181c2ef41p@chr17:932340..932343, -
1.22e-75FFCP PHASE1:Hg19::chr13:51913819..51913838,+#_14dd972335538ceb01939ca2cbd13122p1@SERPINE3
1.22e-75FFCP PHASE2:Hg19::chr13:51913819..51913838,+#_14dd972335538ceb01939ca2cbd13122p1@SERPINE3
2.63e-75FFCP PHASE1:Hg19::chr2:219610798..219610810,+#_96c69ce3e65c0ad54c5d1e01acffe195p17@TTLL4
2.63e-75FFCP PHASE2:Hg19::chr2:219610798..219610810,+#_96c69ce3e65c0ad54c5d1e01acffe195p17@TTLL4
2.83e-66FFCP PHASE1:Hg19::chr5:149250331..149250335,-#_b9a4b3cf563a878cd74429d66295c2d3p@chr5:149250331..149250335, -
2.83e-66FFCP PHASE2:Hg19::chr11:639444..639447,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr11:639444..639447, +
2.83e-66FFCP PHASE2:Hg19::chr18:39859562..39859566,+#_b9a4b3cf563a878cd74429d66295c2d3+, p@chr18:39859562..39859566
2.83e-66FFCP PHASE2:Hg19::chr5:149250331..149250335,-#_b9a4b3cf563a878cd74429d66295c2d3p@chr5:149250331..149250335, -
2.83e-66FFCP PHASE1:Hg19::chr2:165170873..165170919,-#_b9a4b3cf563a878cd74429d66295c2d3p@chr2:165170873..165170919, -
2.83e-66FFCP PHASE1:Hg19::chr12:208274..208283,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr12:208274..208283, +
2.83e-66FFCP PHASE2:Hg19::chr17:1420239..1420279,-#_b9a4b3cf563a878cd74429d66295c2d3p9@INPP5K
2.83e-66FFCP PHASE1:Hg19::chr13:51913893..51913901,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr13:51913893..51913901, +
2.83e-66FFCP PHASE1:Hg19::chr22:41734286..41734290,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr22:41734286..41734290, +
2.83e-66FFCP PHASE1:Hg19::chr18:39859562..39859566,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr18:39859562..39859566, +
2.83e-66FFCP PHASE2:Hg19::chr2:165170873..165170919,-#_b9a4b3cf563a878cd74429d66295c2d3p@chr2:165170873..165170919, -
2.83e-66FFCP PHASE1:Hg19::chr12:208292..208304,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr12:208292..208304, +
2.83e-66FFCP PHASE2:Hg19::chr3:39827273..39827281,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr3:39827273..39827281, +
2.83e-66FFCP PHASE1:Hg19::chr13:99135420..99135443,-#_b9a4b3cf563a878cd74429d66295c2d3p@chr13:99135420..99135443, -
2.83e-66FFCP PHASE2:Hg19::chr12:208274..208283,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr12:208274..208283, +
2.83e-66FFCP PHASE2:Hg19::chr22:41734286..41734290,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr22:41734286..41734290, +
2.83e-66FFCP PHASE2:Hg19::chr21:45724075..45724081,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr21:45724075..45724081, +
2.83e-66FFCP PHASE1:Hg19::chr21:45724075..45724081,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr21:45724075..45724081, +
2.83e-66FFCP PHASE1:Hg19::chr3:39827273..39827281,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr3:39827273..39827281, +
2.83e-66FFCP PHASE1:Hg19::chr15:69850503..69850506,+#_b9a4b3cf563a878cd74429d66295c2d3p3@ENST00000558781
2.83e-66FFCP PHASE1:Hg19::chr1:153476496..153476503,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr1:153476496..153476503, +
2.83e-66FFCP PHASE1:Hg19::chr11:639444..639447,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr11:639444..639447, +
2.83e-66FFCP PHASE2:Hg19::chr13:51913893..51913901,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr13:51913893..51913901, +
2.83e-66FFCP PHASE2:Hg19::chr13:99135420..99135443,-#_b9a4b3cf563a878cd74429d66295c2d3p@chr13:99135420..99135443, -
2.83e-66FFCP PHASE1:Hg19::chr17:1420239..1420279,-#_b9a4b3cf563a878cd74429d66295c2d3p9@INPP5K
2.83e-66FFCP PHASE2:Hg19::chr12:208292..208304,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr12:208292..208304, +
2.83e-66FFCP PHASE2:Hg19::chr1:153476496..153476503,+#_b9a4b3cf563a878cd74429d66295c2d3p@chr1:153476496..153476503, +
2.83e-66FFCP PHASE2:Hg19::chr15:69850503..69850506,+#_b9a4b3cf563a878cd74429d66295c2d3p3@ENST00000558781
4.34e-66FFCP PHASE2:Hg19::chr3:69928426..69928436,+#_6b5cea56dc406b963134ecffe320d8fbp@chr3:69928426..69928436, +
4.34e-66FFCP PHASE1:Hg19::chr3:69928426..69928436,+#_6b5cea56dc406b963134ecffe320d8fbp@chr3:69928426..69928436, +
5.13e-66FFCP PHASE2:Hg19::chr1:43533230..43533270,+#_858492f73c4eb5a8fef347bbc3bae3a9+, p@chr1:43533230..43533270
5.13e-66FFCP PHASE1:Hg19::chr1:43533230..43533270,+#_858492f73c4eb5a8fef347bbc3bae3a9p@chr1:43533230..43533270, +
1.01e-59FFCP PHASE2:Hg19::chr9:140088882..140088898,-#_f0fe936066b2f0efb9cfea3d88823354p@chr9:140088882..140088898, -
1.01e-59FFCP PHASE1:Hg19::chr9:140088882..140088898,-#_f0fe936066b2f0efb9cfea3d88823354p@chr9:140088882..140088898, -
1.82e-59FFCP PHASE1:Hg19::chr11:119217442..119217445,-#_eccad0293bd85546ffe226ba12178b60p5@MFRP, p6@C1QTNF5
1.82e-59FFCP PHASE2:Hg19::chr11:119217442..119217445,-#_eccad0293bd85546ffe226ba12178b60p5@MFRP, p6@C1QTNF5
1.82e-59FFCP PHASE2:Hg19::chr16:84228961..84228982,+#_eccad0293bd85546ffe226ba12178b60p@chr16:84228961..84228982, +
1.82e-59FFCP PHASE1:Hg19::chr16:84228961..84228982,+#_eccad0293bd85546ffe226ba12178b60p@chr16:84228961..84228982, +
6.44e-59FFCP PHASE2:Hg19::chr21:36041275..36041282,+#_6a5f66fd89d4b8b7c49155af67a39ac3p5@CLIC6
6.44e-59FFCP PHASE1:Hg19::chr21:36041275..36041282,+#_6a5f66fd89d4b8b7c49155af67a39ac3p5@CLIC6
1.58e-53FFCP PHASE1:Hg19::chr13:99135278..99135298,-#_0b9c7d153758df3b1e765ac0c099baf1p@chr13:99135278..99135298, -
1.58e-53FFCP PHASE2:Hg19::chr13:99135278..99135298,-#_0b9c7d153758df3b1e765ac0c099baf1p@chr13:99135278..99135298, -
9.03e-53FFCP PHASE2:Hg19::chr1:205226309..205226329,+#_1a61a6ceb60e2373cf1ea900e3bb373fp4@TMCC2
9.03e-53FFCP PHASE1:Hg19::chr1:205226309..205226329,+#_1a61a6ceb60e2373cf1ea900e3bb373fp4@TMCC2
3.84e-50FFCP PHASE2:Hg19::chr17:932596..932605,-#_d0611749900ddd55050e8429f5e75e97p@chr17:932596..932605, -
3.84e-50FFCP PHASE1:Hg19::chr17:932596..932605,-#_d0611749900ddd55050e8429f5e75e97p@chr17:932596..932605, -
5.37e-50FFCP PHASE2:Hg19::chr22:38480132..38480159,-#_3a0a569e1cd33d4c819d62de1b7d25e5p1@SLC16A8
5.37e-50FFCP PHASE1:Hg19::chr22:38480132..38480159,-#_3a0a569e1cd33d4c819d62de1b7d25e5p1@SLC16A8
8.88e-50FFCP PHASE2:Hg19::chr2:235591306..235591328,+#_3634247afc19523c9c2bb3af66e6aea9p@chr2:235591306..235591328, +
8.88e-50FFCP PHASE1:Hg19::chr2:235591306..235591328,+#_3634247afc19523c9c2bb3af66e6aea9p@chr2:235591306..235591328, +
1.05e-49FFCP PHASE1:Hg19::chr3:183733654..183733680,-#_ca3372d8174013a3335bb9543f07e462p@chr3:183733654..183733680, -
1.05e-49FFCP PHASE1:Hg19::chrX:96819517..96819540,-#_ca3372d8174013a3335bb9543f07e462p1@DIAPH2-AS1
1.05e-49FFCP PHASE2:Hg19::chrX:96819517..96819540,-#_ca3372d8174013a3335bb9543f07e462p1@DIAPH2-AS1
1.05e-49FFCP PHASE2:Hg19::chr3:183733654..183733680,-#_ca3372d8174013a3335bb9543f07e462p@chr3:183733654..183733680, -
1.24e-49FFCP PHASE1:Hg19::chr16:89441550..89441568,-#_de21c778f89256fc5d3b516522b7f413p@chr16:89441550..89441568, -
1.24e-49FFCP PHASE2:Hg19::chr16:89441550..89441568,-#_de21c778f89256fc5d3b516522b7f413p@chr16:89441550..89441568, -
1.73e-49FFCP PHASE1:Hg19::chr3:98672197..98672201,+#_388022b7072f042687cda778bfffbd40p@chr3:98672197..98672201, +
1.73e-49FFCP PHASE2:Hg19::chr3:98672197..98672201,+#_388022b7072f042687cda778bfffbd40p@chr3:98672197..98672201, +
5.28e-49FFCP PHASE2:Hg19::chr14:57277163..57277168,-#_4f278fc41d51ba07df14150d3451d990p4@OTX2
5.28e-49FFCP PHASE1:Hg19::chr14:57277163..57277168,-#_4f278fc41d51ba07df14150d3451d990p4@OTX2
9.58e-49FFCP PHASE1:Hg19::chr14:87636652..87636657,-#_82789d3301d807652da61b6e1bfa9518p@chr14:87636652..87636657, -
9.58e-49FFCP PHASE2:Hg19::chr14:87636652..87636657,-#_82789d3301d807652da61b6e1bfa9518p@chr14:87636652..87636657, -
1.38e-48FFCP PHASE2:Hg19::chr3:69928371..69928385,+#_1ef63fea311b3e92426369a25a8eac73p@chr3:69928371..69928385, +
1.38e-48FFCP PHASE1:Hg19::chr3:69928371..69928385,+#_1ef63fea311b3e92426369a25a8eac73p@chr3:69928371..69928385, +
2.88e-48FFCP PHASE1:Hg19::chr12:78359999..78360035,+#_3c5b0cebdb7b9526916eaaa91d75c1e3p13@NAV3
2.88e-48FFCP PHASE2:Hg19::chr12:78359999..78360035,+#_3c5b0cebdb7b9526916eaaa91d75c1e3p13@NAV3
3.25e-48FFCP PHASE2:Hg19::chr1:53608289..53608315,-#_38048b7165b02328347bee888216d8e0p1@SLC1A7
3.25e-48FFCP PHASE1:Hg19::chr1:53608289..53608315,-#_38048b7165b02328347bee888216d8e0p1@SLC1A7
6.65e-45FFCP PHASE1:Hg19::chr21:36041264..36041274,+#_dfd20e87b0fe79343c8a84eb86ccd383p3@CLIC6
6.65e-45FFCP PHASE2:Hg19::chr21:36041264..36041274,+#_dfd20e87b0fe79343c8a84eb86ccd383p3@CLIC6
9.76e-45FFCP PHASE2:Hg19::chr9:111764519..111764525,-#_d401d947660a3bb86445a1673b9ff222p@chr9:111764519..111764525, -
9.76e-45FFCP PHASE2:Hg19::chr5:82640256..82640260,+#_d401d947660a3bb86445a1673b9ff222p@chr5:82640256..82640260, +
9.76e-45FFCP PHASE2:Hg19::chr7:129028525..129028531,+#_d401d947660a3bb86445a1673b9ff222p32@AHCYL2
9.76e-45FFCP PHASE1:Hg19::chr9:111764519..111764525,-#_d401d947660a3bb86445a1673b9ff222p@chr9:111764519..111764525, -
9.76e-45FFCP PHASE2:Hg19::chr21:16031159..16031171,-#_d401d947660a3bb86445a1673b9ff222p3@LOC388813
9.76e-45FFCP PHASE1:Hg19::chr2:219610770..219610777,+#_d401d947660a3bb86445a1673b9ff222p19@TTLL4

Retrieved from "http://f5-webapp2.gsc.riken.jp/5/sstar/index.php?title=UBERON:0005388&oldid=3277767"