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UBERON:0005498

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Name:primitive heart tube
Namespace:FANTOM
Definition:"Multi-tissue structure that arises from the heart rudiment and will become the heart tube." [ZFA:0000149]
Xrefs:
links:

EHDAA2:0001512
EHDAA:436
EMAPA:16215
SCTID:361522004
TAO:0000149

ZFA:0000149
Subset: vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0000481(multi-tissue structure),UBERON:0002050(embryonic structure),UBERON:0004120(mesoderm-derived structure)
develops_from:UBERON:0004291(heart rudiment)
part_of:UBERON:0000922(embryo)



Children

develops from:UBERON:0004141 (heart tube)
part of:UBERON:0002061 (truncus arteriosus),UBERON:0006283 (future cardiac ventricle),UBERON:0007280 (presumptive endocardium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005498 (primitive heart tube), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
1.09e-81FFCP PHASE1:Mm9::chr4:147375434..147375447,+#_f412ca5050337f7f8749c4bdf6acc6a4p@chr4:147375434..147375447, +
1.09e-81FFCP PHASE2:Mm9::chr9:24549775..24549776,-#_f412ca5050337f7f8749c4bdf6acc6a4p@chr9:24549775..24549776, -
1.09e-81FFCP PHASE2:Mm9::chr1:137747392..137747402,-#_f412ca5050337f7f8749c4bdf6acc6a4p@chr1:137747392..137747402, -
1.09e-81FFCP PHASE1:Mm9::chr1:137747392..137747402,-#_f412ca5050337f7f8749c4bdf6acc6a4p@chr1:137747392..137747402, -
1.09e-81FFCP PHASE2:Mm9::chr4:147375434..147375447,+#_f412ca5050337f7f8749c4bdf6acc6a4p@chr4:147375434..147375447, +
1.09e-81FFCP PHASE1:Mm9::chr9:24549775..24549776,-#_f412ca5050337f7f8749c4bdf6acc6a4p@chr9:24549775..24549776, -
1.88e-78FFCP PHASE1:Mm9::chr4:140980456..140980463,+#_87e5b145081bd067eb79b485e492b63ep@chr4:140980456..140980463, +
1.88e-78FFCP PHASE2:Mm9::chr4:140980456..140980463,+#_87e5b145081bd067eb79b485e492b63ep@chr4:140980456..140980463, +
1.92e-77FFCP PHASE2:Mm9::chr1:137737483..137737497,-#_df95c9c581a8eb1dfaea770be3c20511p@chr1:137737483..137737497, -
1.92e-77FFCP PHASE1:Mm9::chr1:137737483..137737497,-#_df95c9c581a8eb1dfaea770be3c20511p@chr1:137737483..137737497, -
1.92e-77FFCP PHASE1:Mm9::chr12:113728951..113728965,+#_df95c9c581a8eb1dfaea770be3c20511p@chr12:113728951..113728965, +
1.92e-77FFCP PHASE2:Mm9::chr12:113728951..113728965,+#_df95c9c581a8eb1dfaea770be3c20511p@chr12:113728951..113728965, +
2.14e-77FFCP PHASE2:Mm9::chr4:147375200..147375220,+#_7e95142989f30759f6269004c64df071p@chr4:147375200..147375220, +
2.14e-77FFCP PHASE2:Mm9::chr19:36187511..36187515,-#_7e95142989f30759f6269004c64df071p@chr19:36187511..36187515, -
2.14e-77FFCP PHASE1:Mm9::chr4:147375200..147375220,+#_7e95142989f30759f6269004c64df071p@chr4:147375200..147375220, +
2.14e-77FFCP PHASE1:Mm9::chr19:36187511..36187515,-#_7e95142989f30759f6269004c64df071p@chr19:36187511..36187515, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744668..137744681,-#_6b7c5e618663531f19325d6e488d2768p@chr1:137744668..137744681, -
8.14e-77FFCP PHASE2:Mm9::chr1:137747382..137747385,-#_6b7c5e618663531f19325d6e488d2768p@chr1:137747382..137747385, -
8.14e-77FFCP PHASE2:Mm9::chr14:55568737..55568746,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55568737..55568746, -
8.14e-77FFCP PHASE1:Mm9::chr1:137745434..137745445,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137745434..137745445, +
8.14e-77FFCP PHASE2:Mm9::chr14:55572120..55572173,+#_6b7c5e618663531f19325d6e488d2768p@chr14:55572120..55572173, +
8.14e-77FFCP PHASE2:Mm9::chr4:147375901..147375913,+#_6b7c5e618663531f19325d6e488d2768p@chr4:147375901..147375913, +
8.14e-77FFCP PHASE1:Mm9::chr1:137744550..137744565,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137744550..137744565, +
8.14e-77FFCP PHASE1:Mm9::chr1:137747382..137747385,-#_6b7c5e618663531f19325d6e488d2768p@chr1:137747382..137747385, -
8.14e-77FFCP PHASE1:Mm9::chr14:55572120..55572173,+#_6b7c5e618663531f19325d6e488d2768p@chr14:55572120..55572173, +
8.14e-77FFCP PHASE2:Mm9::chr14:55584197..55584239,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55584197..55584239, -
8.14e-77FFCP PHASE2:Mm9::chr1:137747289..137747313,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137747289..137747313, +
8.14e-77FFCP PHASE1:Mm9::chr1:137744636..137744654,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137744636..137744654, +
8.14e-77FFCP PHASE1:Mm9::chr14:55571909..55571953,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55571909..55571953, -
8.14e-77FFCP PHASE1:Mm9::chr14:55565785..55565833,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55565785..55565833, -
8.14e-77FFCP PHASE1:Mm9::chr19:36193772..36193793,-#_6b7c5e618663531f19325d6e488d2768p@chr19:36193772..36193793, -
8.14e-77FFCP PHASE1:Mm9::chr5:120286706..120286736,+#_6b7c5e618663531f19325d6e488d2768p@chr5:120286706..120286736, +
8.14e-77FFCP PHASE1:Mm9::chr4:147375901..147375913,+#_6b7c5e618663531f19325d6e488d2768p@chr4:147375901..147375913, +
8.14e-77FFCP PHASE2:Mm9::chr14:55568937..55568988,-#_6b7c5e618663531f19325d6e488d2768-, p@chr14:55568937..55568988
8.14e-77FFCP PHASE2:Mm9::chr14:55586837..55586880,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55586837..55586880, -
8.14e-77FFCP PHASE1:Mm9::chr14:55584197..55584239,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55584197..55584239, -
8.14e-77FFCP PHASE1:Mm9::chr1:137744668..137744681,-#_6b7c5e618663531f19325d6e488d2768p@chr1:137744668..137744681, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744333..137744352,-#_6b7c5e618663531f19325d6e488d2768p@chr1:137744333..137744352, -
8.14e-77FFCP PHASE1:Mm9::chr14:55581579..55581620,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55581579..55581620, -
8.14e-77FFCP PHASE1:Mm9::chr1:137747289..137747313,+#_6b7c5e618663531f19325d6e488d2768+, p@chr1:137747289..137747313
8.14e-77FFCP PHASE2:Mm9::chr11:58815923..58815951,-#_6b7c5e618663531f19325d6e488d2768p@chr11:58815923..58815951, -
8.14e-77FFCP PHASE2:Mm9::chr14:55563577..55563611,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55563577..55563611, -
8.14e-77FFCP PHASE1:Mm9::chr14:55584663..55584731,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55584663..55584731, -
8.14e-77FFCP PHASE2:Mm9::chr5:120286706..120286736,+#_6b7c5e618663531f19325d6e488d2768p@chr5:120286706..120286736, +
8.14e-77FFCP PHASE2:Mm9::chr1:137744611..137744621,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137744611..137744621, +
8.14e-77FFCP PHASE1:Mm9::chr1:137743272..137743307,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137743272..137743307, +
8.14e-77FFCP PHASE2:Mm9::chr15:88850827..88850850,+#_6b7c5e618663531f19325d6e488d2768p2@Mov10l1
8.14e-77FFCP PHASE1:Mm9::chr14:55568790..55568803,-#_6b7c5e618663531f19325d6e488d2768-, p@chr14:55568790..55568803
8.14e-77FFCP PHASE2:Mm9::chr14:55584272..55584298,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55584272..55584298, -
8.14e-77FFCP PHASE1:Mm9::chr14:55563577..55563611,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55563577..55563611, -
8.14e-77FFCP PHASE2:Mm9::chr1:137747953..137747967,-#_6b7c5e618663531f19325d6e488d2768p@chr1:137747953..137747967, -
8.14e-77FFCP PHASE2:Mm9::chr14:55581579..55581620,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55581579..55581620, -
8.14e-77FFCP PHASE2:Mm9::chr14:55584663..55584731,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55584663..55584731, -
8.14e-77FFCP PHASE2:Mm9::chr14:55568790..55568803,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55568790..55568803, -
8.14e-77FFCP PHASE2:Mm9::chr14:55571909..55571953,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55571909..55571953, -
8.14e-77FFCP PHASE2:Mm9::chr19:36193772..36193793,-#_6b7c5e618663531f19325d6e488d2768p@chr19:36193772..36193793, -
8.14e-77FFCP PHASE1:Mm9::chr11:58815923..58815951,-#_6b7c5e618663531f19325d6e488d2768p@chr11:58815923..58815951, -
8.14e-77FFCP PHASE1:Mm9::chr1:137744611..137744621,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137744611..137744621, +
8.14e-77FFCP PHASE2:Mm9::chr1:137743272..137743307,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137743272..137743307, +
8.14e-77FFCP PHASE1:Mm9::chr1:137747953..137747967,-#_6b7c5e618663531f19325d6e488d2768p@chr1:137747953..137747967, -
8.14e-77FFCP PHASE2:Mm9::chr1:137745434..137745445,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137745434..137745445, +
8.14e-77FFCP PHASE1:Mm9::chr14:55584272..55584298,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55584272..55584298, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744550..137744565,+#_6b7c5e618663531f19325d6e488d2768p@chr1:137744550..137744565, +
8.14e-77FFCP PHASE1:Mm9::chr15:88850827..88850850,+#_6b7c5e618663531f19325d6e488d2768p2@Mov10l1
8.14e-77FFCP PHASE1:Mm9::chr1:137744333..137744352,-#_6b7c5e618663531f19325d6e488d2768p@chr1:137744333..137744352, -
8.14e-77FFCP PHASE1:Mm9::chr14:55568737..55568746,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55568737..55568746, -
8.14e-77FFCP PHASE2:Mm9::chr11:65461897..65461929,-#_6b7c5e618663531f19325d6e488d2768p@chr11:65461897..65461929, -
8.14e-77FFCP PHASE2:Mm9::chr14:55579265..55579297,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55579265..55579297, -
8.14e-77FFCP PHASE1:Mm9::chr14:55579265..55579297,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55579265..55579297, -
8.14e-77FFCP PHASE1:Mm9::chr11:65461897..65461929,-#_6b7c5e618663531f19325d6e488d2768p@chr11:65461897..65461929, -
8.14e-77FFCP PHASE2:Mm9::chr1:137744636..137744654,+#_6b7c5e618663531f19325d6e488d2768+, p@chr1:137744636..137744654
8.14e-77FFCP PHASE1:Mm9::chr14:55568937..55568988,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55568937..55568988, -
8.14e-77FFCP PHASE2:Mm9::chr14:55565785..55565833,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55565785..55565833, -
8.14e-77FFCP PHASE1:Mm9::chr14:55586837..55586880,-#_6b7c5e618663531f19325d6e488d2768p@chr14:55586837..55586880, -
1.2e-73FFCP PHASE1:Mm9::chr1:137742152..137742184,-#_301241cb8b70b8a1851796d604c71d8ap@chr1:137742152..137742184, -
1.2e-73FFCP PHASE2:Mm9::chr1:137742152..137742184,-#_301241cb8b70b8a1851796d604c71d8ap@chr1:137742152..137742184, -
1.46e-72FFCP PHASE1:Mm9::chr16:5431481..5431510,+#_f08521838182c36c801eb0af88b0a1c6p@chr16:5431481..5431510, +
1.46e-72FFCP PHASE1:Mm9::chr1:137742470..137742481,+#_f08521838182c36c801eb0af88b0a1c6p@chr1:137742470..137742481, +
1.46e-72FFCP PHASE2:Mm9::chr7:4473478..4473505,-#_f08521838182c36c801eb0af88b0a1c6p2@Tnni3
1.46e-72FFCP PHASE1:Mm9::chr7:4473478..4473505,-#_f08521838182c36c801eb0af88b0a1c6p2@Tnni3
1.46e-72FFCP PHASE2:Mm9::chr14:55577329..55577367,-#_f08521838182c36c801eb0af88b0a1c6p@chr14:55577329..55577367, -
1.46e-72FFCP PHASE1:Mm9::chr14:55577329..55577367,-#_f08521838182c36c801eb0af88b0a1c6p@chr14:55577329..55577367, -
1.46e-72FFCP PHASE2:Mm9::chr1:137742470..137742481,+#_f08521838182c36c801eb0af88b0a1c6p@chr1:137742470..137742481, +
1.46e-72FFCP PHASE2:Mm9::chr16:5431481..5431510,+#_f08521838182c36c801eb0af88b0a1c6p@chr16:5431481..5431510, +
1.63e-72FFCP PHASE1:Mm9::chr19:36193739..36193752,-#_3904e3be89e0a62ba3eee1756e816d69p@chr19:36193739..36193752, -
1.63e-72FFCP PHASE1:Mm9::chr10:53062244..53062249,+#_3904e3be89e0a62ba3eee1756e816d69p@chr10:53062244..53062249, +
1.63e-72FFCP PHASE2:Mm9::chr16:38713504..38713520,-#_3904e3be89e0a62ba3eee1756e816d69p11@Arhgap31
1.63e-72FFCP PHASE2:Mm9::chr10:53062244..53062249,+#_3904e3be89e0a62ba3eee1756e816d69p@chr10:53062244..53062249, +
1.63e-72FFCP PHASE2:Mm9::chr2:113880065..113880076,+#_3904e3be89e0a62ba3eee1756e816d69p1@ENSMUST00000154140
1.63e-72FFCP PHASE2:Mm9::chr19:36193739..36193752,-#_3904e3be89e0a62ba3eee1756e816d69p@chr19:36193739..36193752, -
1.63e-72FFCP PHASE1:Mm9::chr2:17382210..17382221,-#_3904e3be89e0a62ba3eee1756e816d69p5@Nebl
1.63e-72FFCP PHASE2:Mm9::chr2:17382210..17382221,-#_3904e3be89e0a62ba3eee1756e816d69p5@Nebl
1.63e-72FFCP PHASE1:Mm9::chr5:58108164..58108178,+#_3904e3be89e0a62ba3eee1756e816d69p@chr5:58108164..58108178, +
1.63e-72FFCP PHASE1:Mm9::chr2:113880065..113880076,+#_3904e3be89e0a62ba3eee1756e816d69p1@ENSMUST00000154140
1.63e-72FFCP PHASE1:Mm9::chr16:38713504..38713520,-#_3904e3be89e0a62ba3eee1756e816d69p11@Arhgap31
1.63e-72FFCP PHASE2:Mm9::chr5:58108164..58108178,+#_3904e3be89e0a62ba3eee1756e816d69p@chr5:58108164..58108178, +
1.82e-72FFCP PHASE2:Mm9::chr9:24529233..24529237,-#_4793c2bb7ccc46d1b0c4fb0c65a3dbbdp@chr9:24529233..24529237, -
1.82e-72FFCP PHASE1:Mm9::chr9:24529233..24529237,-#_4793c2bb7ccc46d1b0c4fb0c65a3dbbdp@chr9:24529233..24529237, -
2.03e-72FFCP PHASE2:Mm9::chr2:30851059..30851089,+#_0e767564f985027d5f5fdac7f8cdd0e8p6@Usp20
2.03e-72FFCP PHASE1:Mm9::chr2:30851059..30851089,+#_0e767564f985027d5f5fdac7f8cdd0e8p6@Usp20

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