UBERON:0007806
From FANTOM5_SSTAR
Name: | connecting stalk | ||
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Namespace: | FANTOM | ||
Definition: | "A bridge of mesoderm connecting the caudal end of the young embryo with the trophoblastic tissues; the precursor of the umbilical cord." [Medical_Dictionary:http://medical-dictionary.thefreedictionary.com/] | ||
Xrefs: |
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Comments: | todo - this is currently defined as a bridge of mesoderm, but in EHDAA2 is extraembryonic structure split into mesoderm and blood vessels |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000478(extraembryonic structure),UBERON:0004120(mesoderm-derived structure) |
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develops_from: | UBERON:0005728(extraembryonic mesoderm) |
Children
develops from: | UBERON:0002331 (umbilical cord) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007806 (connecting stalk), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
5.79e-79 | FFCP PHASE1:Hg19::chr10:120921270..120921282,-#_14bb33615039afdf9052037a7d91f708 | p@chr10:120921270..120921282, - |
5.79e-79 | FFCP PHASE2:Hg19::chr7:135931480..135931486,+#_14bb33615039afdf9052037a7d91f708 | p@chr7:135931480..135931486, + |
5.79e-79 | FFCP PHASE1:Hg19::chr7:135931480..135931486,+#_14bb33615039afdf9052037a7d91f708 | p@chr7:135931480..135931486, + |
5.79e-79 | FFCP PHASE2:Hg19::chr10:120921270..120921282,-#_14bb33615039afdf9052037a7d91f708 | p@chr10:120921270..120921282, - |
2.16e-63 | FFCP PHASE1:Hg19::chr1:205744117..205744127,-#_f6db00c50a1cf20f61c2f87d1ff10a42 | p8@RAB7L1 |
2.16e-63 | FFCP PHASE2:Hg19::chr1:205744117..205744127,-#_f6db00c50a1cf20f61c2f87d1ff10a42 | p8@RAB7L1 |
1.1e-59 | FFCP PHASE1:Hg19::chr9:75001932..75001956,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:75001932..75001956, - |
1.1e-59 | FFCP PHASE2:Hg19::chr6:135486487..135486491,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:135486487..135486491, + |
1.1e-59 | FFCP PHASE2:Hg19::chr22:20105576..20105585,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p11@RANBP1 |
1.1e-59 | FFCP PHASE1:Hg19::chr1:146746588..146746604,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p5@CHD1L |
1.1e-59 | FFCP PHASE1:Hg19::chr2:228216642..228216661,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p11@MFF |
1.1e-59 | FFCP PHASE2:Hg19::chr6:87324188..87324195,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:87324188..87324195, + |
1.1e-59 | FFCP PHASE1:Hg19::chr7:45954667..45954675,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p42@IGFBP3 |
1.1e-59 | FFCP PHASE1:Hg19::chr19:42682291..42682301,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:42682291..42682301, - |
1.1e-59 | FFCP PHASE2:Hg19::chr4:167957459..167957470,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167957459..167957470, - |
1.1e-59 | FFCP PHASE1:Hg19::chr7:106397647..106397655,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:106397647..106397655, + |
1.1e-59 | FFCP PHASE2:Hg19::chr21:18180062..18180079,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18180062..18180079, - |
1.1e-59 | FFCP PHASE1:Hg19::chr17:1985278..1985290,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr17:1985278..1985290, - |
1.1e-59 | FFCP PHASE1:Hg19::chr2:148284480..148284484,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148284480..148284484, + |
1.1e-59 | FFCP PHASE1:Hg19::chr6:138023154..138023161,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:138023154..138023161, - |
1.1e-59 | FFCP PHASE1:Hg19::chr6:484679..484683,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:484679..484683, + |
1.1e-59 | FFCP PHASE2:Hg19::chr13:101999642..101999655,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr13:101999642..101999655, - |
1.1e-59 | FFCP PHASE2:Hg19::chr9:74997054..74997058,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74997054..74997058, - |
1.1e-59 | FFCP PHASE2:Hg19::chr1:207617923..207617929,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:207617923..207617929, - |
1.1e-59 | FFCP PHASE1:Hg19::chr8:42248931..42248936,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p6@VDAC3 |
1.1e-59 | FFCP PHASE2:Hg19::chr4:167791926..167791930,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167791926..167791930, - |
1.1e-59 | FFCP PHASE2:Hg19::chr11:129247710..129247730,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr11:129247710..129247730, + |
1.1e-59 | FFCP PHASE1:Hg19::chr8:59970765..59970787,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr8:59970765..59970787, - |
1.1e-59 | FFCP PHASE1:Hg19::chr11:129247710..129247730,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr11:129247710..129247730, + |
1.1e-59 | FFCP PHASE1:Hg19::chr21:18178842..18178867,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18178842..18178867, - |
1.1e-59 | FFCP PHASE1:Hg19::chr6:137816618..137816627,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:137816618..137816627, - |
1.1e-59 | FFCP PHASE2:Hg19::chr2:148296759..148296767,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148296759..148296767, + |
1.1e-59 | FFCP PHASE1:Hg19::chr3:111319059..111319101,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:111319059..111319101, - |
1.1e-59 | FFCP PHASE1:Hg19::chr22:20105576..20105585,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p11@RANBP1 |
1.1e-59 | FFCP PHASE2:Hg19::chr6:138023078..138023089,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:138023078..138023089, - |
1.1e-59 | FFCP PHASE2:Hg19::chr2:45063061..45063082,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:45063061..45063082, - |
1.1e-59 | FFCP PHASE1:Hg19::chr2:2930946..2930963,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:2930946..2930963, + |
1.1e-59 | FFCP PHASE1:Hg19::chr10:109197952..109197957,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:109197952..109197957, + |
1.1e-59 | FFCP PHASE2:Hg19::chr1:212870782..212870788,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:212870782..212870788, - |
1.1e-59 | FFCP PHASE1:Hg19::chr5:146717844..146717861,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr5:146717844..146717861, + |
1.1e-59 | FFCP PHASE1:Hg19::chr4:167944606..167944610,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:167944606..167944610, - |
1.1e-59 | FFCP PHASE2:Hg19::chr10:120921294..120921306,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:120921294..120921306, - |
1.1e-59 | FFCP PHASE1:Hg19::chr3:119279036..119279047,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:119279036..119279047, + |
1.1e-59 | FFCP PHASE1:Hg19::chr10:61574724..61574737,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:61574724..61574737, - |
1.1e-59 | FFCP PHASE2:Hg19::chr19:49488921..49488932,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:49488921..49488932, - |
1.1e-59 | FFCP PHASE2:Hg19::chr3:169775687..169775690,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:169775687..169775690, - |
1.1e-59 | FFCP PHASE1:Hg19::chr8:56618992..56618998,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr8:56618992..56618998, + |
1.1e-59 | FFCP PHASE2:Hg19::chr2:228216588..228216609,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p10@MFF |
1.1e-59 | FFCP PHASE2:Hg19::chr3:45926401..45926410,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:45926401..45926410, - |
1.1e-59 | FFCP PHASE2:Hg19::chr16:86326031..86326033,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr16:86326031..86326033, + |
1.1e-59 | FFCP PHASE1:Hg19::chr2:15633244..15633249,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:15633244..15633249, + |
1.1e-59 | FFCP PHASE2:Hg19::chr12:129054695..129054717,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr12:129054695..129054717, - |
1.1e-59 | FFCP PHASE2:Hg19::chr3:189266272..189266296,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:189266272..189266296, - |
1.1e-59 | FFCP PHASE1:Hg19::chr4:182684840..182684848,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:182684840..182684848, + |
1.1e-59 | FFCP PHASE1:Hg19::chr2:228216535..228216554,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p14@MFF |
1.1e-59 | FFCP PHASE1:Hg19::chr6:87324200..87324219,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:87324200..87324219, + |
1.1e-59 | FFCP PHASE1:Hg19::chr22:37484406..37484413,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr22:37484406..37484413, + |
1.1e-59 | FFCP PHASE2:Hg19::chr10:15035430..15035449,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:15035430..15035449, - |
1.1e-59 | FFCP PHASE1:Hg19::chr19:40074306..40074328,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:40074306..40074328, + |
1.1e-59 | FFCP PHASE1:Hg19::chr20:38442102..38442111,+#_1ac1f7fee605574c13bf5a8740d5fd0f | +, p@chr20:38442102..38442111 |
1.1e-59 | FFCP PHASE1:Hg19::chr4:85688154..85688161,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr4:85688154..85688161, - |
1.1e-59 | FFCP PHASE2:Hg19::chr22:37484379..37484392,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr22:37484379..37484392, + |
1.1e-59 | FFCP PHASE2:Hg19::chr4:167938808..167938815,-#_1ac1f7fee605574c13bf5a8740d5fd0f | -, p@chr4:167938808..167938815 |
1.1e-59 | FFCP PHASE2:Hg19::chr19:53511711..53511720,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:53511711..53511720, - |
1.1e-59 | FFCP PHASE2:Hg19::chr21:18178842..18178867,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18178842..18178867, - |
1.1e-59 | FFCP PHASE1:Hg19::chr15:43323772..43323785,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr15:43323772..43323785, - |
1.1e-59 | FFCP PHASE1:Hg19::chr21:18180126..18180130,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr21:18180126..18180130, - |
1.1e-59 | FFCP PHASE1:Hg19::chr6:138023015..138023024,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:138023015..138023024, - |
1.1e-59 | FFCP PHASE2:Hg19::chr3:111319059..111319101,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:111319059..111319101, - |
1.1e-59 | FFCP PHASE1:Hg19::chr5:162742836..162742845,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr5:162742836..162742845, - |
1.1e-59 | FFCP PHASE1:Hg19::chr9:74995293..74995311,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74995293..74995311, - |
1.1e-59 | FFCP PHASE2:Hg19::chr9:74995216..74995247,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:74995216..74995247, - |
1.1e-59 | FFCP PHASE2:Hg19::chr3:119281371..119281382,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:119281371..119281382, - |
1.1e-59 | FFCP PHASE1:Hg19::chr3:45926316..45926329,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:45926316..45926329, - |
1.1e-59 | FFCP PHASE1:Hg19::chr1:234765062..234765067,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p6@LINC00184 |
1.1e-59 | FFCP PHASE1:Hg19::chr10:111805643..111805655,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:111805643..111805655, - |
1.1e-59 | FFCP PHASE2:Hg19::chr5:77713534..77713543,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr5:77713534..77713543, + |
1.1e-59 | FFCP PHASE1:Hg19::chr14:76957827..76957835,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76957827..76957835, + |
1.1e-59 | FFCP PHASE2:Hg19::chr2:148282641..148282654,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148282641..148282654, + |
1.1e-59 | FFCP PHASE1:Hg19::chr10:30336924..30336935,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p15@KIAA1462 |
1.1e-59 | FFCP PHASE2:Hg19::chr1:234765062..234765067,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p6@LINC00184 |
1.1e-59 | FFCP PHASE2:Hg19::chr19:18603318..18603327,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:18603318..18603327, - |
1.1e-59 | FFCP PHASE2:Hg19::chr4:36393818..36393829,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p2@ENST00000504344 |
1.1e-59 | FFCP PHASE1:Hg19::chr19:49488905..49488920,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:49488905..49488920, - |
1.1e-59 | FFCP PHASE1:Hg19::chr3:153038353..153038371,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr3:153038353..153038371, + |
1.1e-59 | FFCP PHASE2:Hg19::chr17:1985278..1985290,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr17:1985278..1985290, - |
1.1e-59 | FFCP PHASE1:Hg19::chr2:74682916..74682923,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:74682916..74682923, + |
1.1e-59 | FFCP PHASE2:Hg19::chr14:76957814..76957826,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr14:76957814..76957826, + |
1.1e-59 | FFCP PHASE1:Hg19::chr10:15035404..15035424,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr10:15035404..15035424, - |
1.1e-59 | FFCP PHASE2:Hg19::chr19:42682291..42682301,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr19:42682291..42682301, - |
1.1e-59 | FFCP PHASE1:Hg19::chr9:75002215..75002221,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr9:75002215..75002221, - |
1.1e-59 | FFCP PHASE1:Hg19::chr1:212870782..212870788,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr1:212870782..212870788, - |
1.1e-59 | FFCP PHASE2:Hg19::chr7:135735084..135735112,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr7:135735084..135735112, + |
1.1e-59 | FFCP PHASE2:Hg19::chr6:87324200..87324219,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr6:87324200..87324219, + |
1.1e-59 | FFCP PHASE1:Hg19::chr7:45954712..45954720,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p41@IGFBP3 |
1.1e-59 | FFCP PHASE2:Hg19::chr8:59790413..59790418,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr8:59790413..59790418, - |
1.1e-59 | FFCP PHASE1:Hg19::chr2:148293141..148293150,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr2:148293141..148293150, + |
1.1e-59 | FFCP PHASE2:Hg19::chrX:109653507..109653518,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chrX:109653507..109653518, + |
1.1e-59 | FFCP PHASE1:Hg19::chr12:24889813..24889821,-#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr12:24889813..24889821, - |
1.1e-59 | FFCP PHASE2:Hg19::chr20:38442102..38442111,+#_1ac1f7fee605574c13bf5a8740d5fd0f | p@chr20:38442102..38442111, + |