Personal tools

UBERON:0008784

From FANTOM5_SSTAR

Jump to: navigation, search

Name:lower limb segment
Namespace:FANTOM
Xrefs:
links:
FMA:24877
Synonyms: "free lower limb segment" EXACT [FMA:24877]
"free lower limb subdivision" EXACT [FMA:24877]
"segment of free lower limb" EXACT [FMA:24877]
"subdivision of free lower limb" EXACT [FMA:24877]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002529(limb segment)
part_of:UBERON:0002103(hindlimb)



Children

is a:UBERON:0000376 (hindlimb stylopod),UBERON:0000978 (leg),UBERON:0001465 (knee),UBERON:0002387 (foot),UBERON:0003823 (hindlimb zeugopod)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0008784 (lower limb segment), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_b115205ae7fbb8a585eeb36038257280p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_b115205ae7fbb8a585eeb36038257280p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_b115205ae7fbb8a585eeb36038257280p@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_b115205ae7fbb8a585eeb36038257280p@chr10:79759687..79759690, +
5.42e-195FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_b115205ae7fbb8a585eeb36038257280p@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_b115205ae7fbb8a585eeb36038257280p@chr2:179396370..179396375, -
5.42e-195FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_b115205ae7fbb8a585eeb36038257280p@chr22:25535147..25535150, +
5.42e-195FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_b115205ae7fbb8a585eeb36038257280p@chr4:85166508..85166512, +
5.42e-195FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_b115205ae7fbb8a585eeb36038257280p@chr4:186423235..186423240, -
5.42e-195FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_b115205ae7fbb8a585eeb36038257280p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_b115205ae7fbb8a585eeb36038257280p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_b115205ae7fbb8a585eeb36038257280p@chr2:179396370..179396375, -
5.42e-195FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_b115205ae7fbb8a585eeb36038257280p@chr2:76859417..76859418, +
5.42e-195FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_b115205ae7fbb8a585eeb36038257280p@chr22:25535147..25535150, +
5.42e-195FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_b115205ae7fbb8a585eeb36038257280p@chr10:97176812..97176813, +
5.42e-195FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_b115205ae7fbb8a585eeb36038257280p@chr7:128483294..128483304, +
5.42e-195FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_b115205ae7fbb8a585eeb36038257280p@chr11:3691037..3691040, +
5.42e-195FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_b115205ae7fbb8a585eeb36038257280p@chr4:186423235..186423240, -
9.37e-99FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_c86abd49ca76aa64247856950d4b91f9p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_c86abd49ca76aa64247856950d4b91f9p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_c86abd49ca76aa64247856950d4b91f9p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_c86abd49ca76aa64247856950d4b91f9p54@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_c86abd49ca76aa64247856950d4b91f9p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_c86abd49ca76aa64247856950d4b91f9p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_c86abd49ca76aa64247856950d4b91f9p@chr15:51060095..51060101, +
9.37e-99FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_c86abd49ca76aa64247856950d4b91f9p104@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_c86abd49ca76aa64247856950d4b91f9p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_c86abd49ca76aa64247856950d4b91f9p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_c86abd49ca76aa64247856950d4b91f9p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_c86abd49ca76aa64247856950d4b91f9p108@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_c86abd49ca76aa64247856950d4b91f9p93@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_c86abd49ca76aa64247856950d4b91f9p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_c86abd49ca76aa64247856950d4b91f9p77@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_c86abd49ca76aa64247856950d4b91f9p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_c86abd49ca76aa64247856950d4b91f9p@chr13:51335579..51335582, +
9.37e-99FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_c86abd49ca76aa64247856950d4b91f9p46@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_c86abd49ca76aa64247856950d4b91f9p@chr6:33716557..33716600, -
9.37e-99FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_c86abd49ca76aa64247856950d4b91f9p@chr5:172318159..172318160, +
9.37e-99FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_c86abd49ca76aa64247856950d4b91f9p1@ENST00000430244, p1@uc003tvu.2
9.37e-99FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_c86abd49ca76aa64247856950d4b91f9p@chr22:36000901..36000903, -
9.37e-99FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_c86abd49ca76aa64247856950d4b91f9p7@FLJ36848
9.37e-99FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_c86abd49ca76aa64247856950d4b91f9p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_c86abd49ca76aa64247856950d4b91f9p54@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152525581..152525588, -
9.37e-99FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_c86abd49ca76aa64247856950d4b91f9p@chr1:145478051..145478060, -
9.37e-99FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_c86abd49ca76aa64247856950d4b91f9p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152534468..152534476, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_c86abd49ca76aa64247856950d4b91f9p104@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_c86abd49ca76aa64247856950d4b91f9p@chr1:119487319..119487331, -
9.37e-99FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_c86abd49ca76aa64247856950d4b91f9p108@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_c86abd49ca76aa64247856950d4b91f9p93@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:179399371..179399376, -
9.37e-99FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_c86abd49ca76aa64247856950d4b91f9p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152499727..152499734, -
9.37e-99FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_c86abd49ca76aa64247856950d4b91f9p77@XIRP2
9.37e-99FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152553958..152553964, -
9.37e-99FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_c86abd49ca76aa64247856950d4b91f9p@chr5:117747577..117747580, +
9.37e-99FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:152520248..152520253, -
9.37e-99FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_c86abd49ca76aa64247856950d4b91f9p@chr2:179514306..179514308, -
9.37e-99FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_c86abd49ca76aa64247856950d4b91f9p46@XIRP2
9.37e-99FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_c86abd49ca76aa64247856950d4b91f9p@chr3:188070178..188070183, +
9.37e-99FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_c86abd49ca76aa64247856950d4b91f9p@chr13:114067922..114067931, -
9.37e-99FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_c86abd49ca76aa64247856950d4b91f9p7@FLJ36848
9.37e-99FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_c86abd49ca76aa64247856950d4b91f9p@chr5:137206180..137206187, +
9.37e-99FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_c86abd49ca76aa64247856950d4b91f9p@chr5:175125123..175125125, +
9.37e-99FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_c86abd49ca76aa64247856950d4b91f9p@chr8:144542829..144542857, -
9.37e-99FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_c86abd49ca76aa64247856950d4b91f9p@chr15:51060095..51060101, +
2.55e-98FFCP PHASE2:Hg19::chr3:46924232..46924241,+#_15032570c97508b08ba78fe1ebedb8fep@chr3:46924232..46924241, +
2.55e-98FFCP PHASE2:Hg19::chr5:95180155..95180172,+#_15032570c97508b08ba78fe1ebedb8fep@chr5:95180155..95180172, +
2.55e-98FFCP PHASE2:Hg19::chr2:168102459..168102468,+#_15032570c97508b08ba78fe1ebedb8fep73@XIRP2
2.55e-98FFCP PHASE1:Hg19::chr21:47769234..47769239,+#_15032570c97508b08ba78fe1ebedb8fep@chr21:47769234..47769239, +
2.55e-98FFCP PHASE1:Hg19::chr18:8608021..8608050,+#_15032570c97508b08ba78fe1ebedb8fep@chr18:8608021..8608050, +
2.55e-98FFCP PHASE2:Hg19::chr18:8608021..8608050,+#_15032570c97508b08ba78fe1ebedb8fep@chr18:8608021..8608050, +
2.55e-98FFCP PHASE2:Hg19::chr12:122884464..122884467,-#_15032570c97508b08ba78fe1ebedb8fep38@CLIP1
2.55e-98FFCP PHASE2:Hg19::chr2:152566311..152566321,-#_15032570c97508b08ba78fe1ebedb8fep@chr2:152566311..152566321, -
2.55e-98FFCP PHASE1:Hg19::chr10:97037060..97037066,-#_15032570c97508b08ba78fe1ebedb8fep@chr10:97037060..97037066, -
2.55e-98FFCP PHASE2:Hg19::chr10:97037060..97037066,-#_15032570c97508b08ba78fe1ebedb8fep@chr10:97037060..97037066, -
2.55e-98FFCP PHASE2:Hg19::chr12:102079632..102079647,-#_15032570c97508b08ba78fe1ebedb8fep@chr12:102079632..102079647, -
2.55e-98FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_15032570c97508b08ba78fe1ebedb8fep@chr3:69168368..69168389, -
2.55e-98FFCP PHASE2:Hg19::chr2:152590465..152590472,-#_15032570c97508b08ba78fe1ebedb8fep@chr2:152590465..152590472, -
2.55e-98FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_15032570c97508b08ba78fe1ebedb8fep@chr12:69653866..69653876, +
2.55e-98FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_15032570c97508b08ba78fe1ebedb8fep38@CLIP1
2.55e-98FFCP PHASE1:Hg19::chr6:125535391..125535409,+#_15032570c97508b08ba78fe1ebedb8fep@chr6:125535391..125535409, +
2.55e-98FFCP PHASE2:Hg19::chr22:26299595..26299605,+#_15032570c97508b08ba78fe1ebedb8fep@chr22:26299595..26299605, +
2.55e-98FFCP PHASE1:Hg19::chr10:29918007..29918031,-#_15032570c97508b08ba78fe1ebedb8fep@chr10:29918007..29918031, -
2.55e-98FFCP PHASE2:Hg19::chr10:29918007..29918031,-#_15032570c97508b08ba78fe1ebedb8fep@chr10:29918007..29918031, -
2.55e-98FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_15032570c97508b08ba78fe1ebedb8fep@chr3:35732964..35732965, +
2.55e-98FFCP PHASE2:Hg19::chr21:47769234..47769239,+#_15032570c97508b08ba78fe1ebedb8fep@chr21:47769234..47769239, +
2.55e-98FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_15032570c97508b08ba78fe1ebedb8fep@chr2:179656442..179656451, -
2.55e-98FFCP PHASE1:Hg19::chr12:102079632..102079647,-#_15032570c97508b08ba78fe1ebedb8fep@chr12:102079632..102079647, -
2.55e-98FFCP PHASE1:Hg19::chr2:168102459..168102468,+#_15032570c97508b08ba78fe1ebedb8fep73@XIRP2
2.55e-98FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_15032570c97508b08ba78fe1ebedb8fep27@CLIP4
2.55e-98FFCP PHASE1:Hg19::chr3:46924232..46924241,+#_15032570c97508b08ba78fe1ebedb8fep@chr3:46924232..46924241, +