Personal tools

UBERON:0005754

From FANTOM5_SSTAR

Revision as of 17:54, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:rostral part of nephrogenic cord
Namespace:FANTOM
Definition:"The initial renal anlage that develops from the most rostral part of the nephrogenic cord is termed the pronephros." [1]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0000922(embryo),UBERON:0004875(nephrogenic cord)



Children

develops from:UBERON:0002120 (pronephros)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005754 (rostral part of nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_8387abd104907a3e793a7090c34f834ap4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_8387abd104907a3e793a7090c34f834ap@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_8387abd104907a3e793a7090c34f834ap4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_8387abd104907a3e793a7090c34f834ap4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_8387abd104907a3e793a7090c34f834ap4@Defb42
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_8387abd104907a3e793a7090c34f834ap@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_8387abd104907a3e793a7090c34f834ap@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_8387abd104907a3e793a7090c34f834ap@chr14:63585028..63585037, -
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_9b0a7b95236761723dd2f1f2bed0bf3dp@chr2:152388713..152388729, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_9b0a7b95236761723dd2f1f2bed0bf3dp@chr2:152388713..152388729, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_dbcd61420db770d09dd5c8dcc9eaacaep@chr2:120409486..120409492, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_dbcd61420db770d09dd5c8dcc9eaacaep@chr2:120409486..120409492, +
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_4ed5b7ac10c2c9b44311dd68843ebaadp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_4ed5b7ac10c2c9b44311dd68843ebaadp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_4ed5b7ac10c2c9b44311dd68843ebaadp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_4ed5b7ac10c2c9b44311dd68843ebaadp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_4ed5b7ac10c2c9b44311dd68843ebaadp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_4ed5b7ac10c2c9b44311dd68843ebaadp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_4ed5b7ac10c2c9b44311dd68843ebaadp4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_4ed5b7ac10c2c9b44311dd68843ebaadp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_4ed5b7ac10c2c9b44311dd68843ebaadp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_4ed5b7ac10c2c9b44311dd68843ebaadp4@Cyb561
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_a88798a7309ca7df32594a8ec633ff72p@chr14:63627556..63627564, -
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_a88798a7309ca7df32594a8ec633ff72p@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_a88798a7309ca7df32594a8ec633ff72p@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_a88798a7309ca7df32594a8ec633ff72p2@Eddm3b
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_a88798a7309ca7df32594a8ec633ff72p@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_a88798a7309ca7df32594a8ec633ff72p2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_a88798a7309ca7df32594a8ec633ff72p@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_a88798a7309ca7df32594a8ec633ff72p@chr9:26611246..26611253, -
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_af3efb78ec23da5e2381aba3aea98c4cp@chr2:69981027..69981032, +
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_af3efb78ec23da5e2381aba3aea98c4cp@chr2:69981027..69981032, +
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_22f0f370ba8aa7beb0f4db11afca61e0p@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_22f0f370ba8aa7beb0f4db11afca61e0p@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_22f0f370ba8aa7beb0f4db11afca61e0p10@PAX2
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_22f0f370ba8aa7beb0f4db11afca61e0p10@PAX2
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_22f0f370ba8aa7beb0f4db11afca61e0p@chr14:68644730..68644737, +
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_22f0f370ba8aa7beb0f4db11afca61e0p@chr1:172416185..172416189, -
4.54e-44FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_7c326baff5045da379d5709bce71ac83p@chrX:50280199..50280211, +
4.54e-44FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_7c326baff5045da379d5709bce71ac83p@chr8:91107095..91107103, +
4.54e-44FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_7c326baff5045da379d5709bce71ac83p@chr5:88272459..88272484, -
4.54e-44FFCP PHASE1:Mm9::chr2:164480465..164480471,-#_7c326baff5045da379d5709bce71ac83p2@Wfdc9
4.54e-44FFCP PHASE1:Mm9::chr14:66589365..66589371,+#_7c326baff5045da379d5709bce71ac83p19@Clu
4.54e-44FFCP PHASE1:Mm9::chr11:101958887..101958896,-#_7c326baff5045da379d5709bce71ac83p@chr11:101958887..101958896, -
4.54e-44FFCP PHASE2:Mm9::chr15:75347689..75347703,+#_7c326baff5045da379d5709bce71ac83p@chr15:75347689..75347703, +
4.54e-44FFCP PHASE2:Mm9::chr9:26704579..26704582,-#_7c326baff5045da379d5709bce71ac83p@chr9:26704579..26704582, -
4.54e-44FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_7c326baff5045da379d5709bce71ac83p@chr9:34813361..34813403, -
4.54e-44FFCP PHASE2:Mm9::chr7:151927980..151927988,+#_7c326baff5045da379d5709bce71ac83p@chr7:151927980..151927988, +
4.54e-44FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_7c326baff5045da379d5709bce71ac83p@chr7:148445639..148445665, +
4.54e-44FFCP PHASE2:Mm9::chr11:96150839..96150842,-#_7c326baff5045da379d5709bce71ac83p@chr11:96150839..96150842, -
4.54e-44FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_7c326baff5045da379d5709bce71ac83p@chr5:35930706..35930717, +
4.54e-44FFCP PHASE1:Mm9::chr17:73221034..73221051,+#_7c326baff5045da379d5709bce71ac83p@chr17:73221034..73221051, +
4.54e-44FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_7c326baff5045da379d5709bce71ac83p@chr1:90155923..90155932, +
4.54e-44FFCP PHASE2:Mm9::chr13:21378968..21378988,-#_7c326baff5045da379d5709bce71ac83p@chr13:21378968..21378988, -
4.54e-44FFCP PHASE2:Mm9::chr4:33600466..33600491,-#_7c326baff5045da379d5709bce71ac83p@chr4:33600466..33600491, -
4.54e-44FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_7c326baff5045da379d5709bce71ac83p@chr12:16664708..16664723, +
4.54e-44FFCP PHASE1:Mm9::chr8:19062951..19062955,+#_7c326baff5045da379d5709bce71ac83p@chr8:19062951..19062955, +
4.54e-44FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_7c326baff5045da379d5709bce71ac83p3@Lcn12
4.54e-44FFCP PHASE1:Mm9::chr2:148625223..148625234,+#_7c326baff5045da379d5709bce71ac83p@chr2:148625223..148625234, +
4.54e-44FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_7c326baff5045da379d5709bce71ac83p11@Wars
4.54e-44FFCP PHASE1:Mm9::chr5:31379486..31379501,+#_7c326baff5045da379d5709bce71ac83p@chr5:31379486..31379501, +
4.54e-44FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_7c326baff5045da379d5709bce71ac83p@chr13:21379372..21379404, +
4.54e-44FFCP PHASE1:Mm9::chr7:105313229..105313234,-#_7c326baff5045da379d5709bce71ac83p17@Capn5
4.54e-44FFCP PHASE1:Mm9::chr13:24270118..24270122,-#_7c326baff5045da379d5709bce71ac83p@chr13:24270118..24270122, -
4.54e-44FFCP PHASE1:Mm9::chr10:116399500..116399516,+#_7c326baff5045da379d5709bce71ac83p@chr10:116399500..116399516, +
4.54e-44FFCP PHASE1:Mm9::chr1:90156002..90156013,+#_7c326baff5045da379d5709bce71ac83p@chr1:90156002..90156013, +
4.54e-44FFCP PHASE1:Mm9::chr1:155698178..155698191,-#_7c326baff5045da379d5709bce71ac83p@chr1:155698178..155698191, -
4.54e-44FFCP PHASE1:Mm9::chr9:26727675..26727681,-#_7c326baff5045da379d5709bce71ac83p@chr9:26727675..26727681, -
4.54e-44FFCP PHASE1:Mm9::chr5:110773580..110773589,+#_7c326baff5045da379d5709bce71ac83p@chr5:110773580..110773589, +
4.54e-44FFCP PHASE2:Mm9::chr5:66513886..66513897,-#_7c326baff5045da379d5709bce71ac83p@chr5:66513886..66513897, -
4.54e-44FFCP PHASE2:Mm9::chr17:24670830..24670845,+#_7c326baff5045da379d5709bce71ac83p@chr17:24670830..24670845, +
4.54e-44FFCP PHASE2:Mm9::chr8:19141371..19141383,+#_7c326baff5045da379d5709bce71ac83p@chr8:19141371..19141383, +
4.54e-44FFCP PHASE2:Mm9::chr7:75293847..75293851,+#_7c326baff5045da379d5709bce71ac83p@chr7:75293847..75293851, +
4.54e-44FFCP PHASE2:Mm9::chr6:118298429..118298448,+#_7c326baff5045da379d5709bce71ac83p@chr6:118298429..118298448, +
4.54e-44FFCP PHASE2:Mm9::chr12:103896102..103896116,-#_7c326baff5045da379d5709bce71ac83p@chr12:103896102..103896116, -
4.54e-44FFCP PHASE1:Mm9::chr13:21379159..21379162,-#_7c326baff5045da379d5709bce71ac83p@chr13:21379159..21379162, -
4.54e-44FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_7c326baff5045da379d5709bce71ac83p@chr6:83487114..83487124, -
4.54e-44FFCP PHASE2:Mm9::chr7:56772735..56772741,+#_7c326baff5045da379d5709bce71ac83p@chr7:56772735..56772741, +
4.54e-44FFCP PHASE1:Mm9::chr4:40010825..40010844,-#_7c326baff5045da379d5709bce71ac83p@chr4:40010825..40010844, -
4.54e-44FFCP PHASE2:Mm9::chr14:51680551..51680555,-#_7c326baff5045da379d5709bce71ac83p@chr14:51680551..51680555, -
4.54e-44FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_7c326baff5045da379d5709bce71ac83p@chr13:21380670..21380678, -
4.54e-44FFCP PHASE2:Mm9::chr9:70761885..70761895,+#_7c326baff5045da379d5709bce71ac83p@chr9:70761885..70761895, +
4.54e-44FFCP PHASE1:Mm9::chr7:56772735..56772741,+#_7c326baff5045da379d5709bce71ac83p@chr7:56772735..56772741, +
4.54e-44FFCP PHASE2:Mm9::chr18:44264128..44264135,+#_7c326baff5045da379d5709bce71ac83p5@Spink12
4.54e-44FFCP PHASE2:Mm9::chr11:101958887..101958896,-#_7c326baff5045da379d5709bce71ac83p@chr11:101958887..101958896, -
4.54e-44FFCP PHASE1:Mm9::chr8:113585667..113585673,-#_7c326baff5045da379d5709bce71ac83p@chr8:113585667..113585673, -
4.54e-44FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_7c326baff5045da379d5709bce71ac83p@chr2:167688595..167688624, +
4.54e-44FFCP PHASE1:Mm9::chr11:96140694..96140720,+#_7c326baff5045da379d5709bce71ac83p@chr11:96140694..96140720, +
4.54e-44FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_7c326baff5045da379d5709bce71ac83p@chrX:130496166..130496188, -
4.54e-44FFCP PHASE2:Mm9::chr2:167480413..167480463,-#_7c326baff5045da379d5709bce71ac83p@chr2:167480413..167480463, -
4.54e-44FFCP PHASE2:Mm9::chr7:109379339..109379349,+#_7c326baff5045da379d5709bce71ac83p15@Pgap2
4.54e-44FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_7c326baff5045da379d5709bce71ac83p7@Rnase12
4.54e-44FFCP PHASE2:Mm9::chr16:25752183..25752203,+#_7c326baff5045da379d5709bce71ac83p@chr16:25752183..25752203, +
4.54e-44FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_7c326baff5045da379d5709bce71ac83p@chr5:31379972..31379981, +
4.54e-44FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_7c326baff5045da379d5709bce71ac83p2@Defb23
4.54e-44FFCP PHASE1:Mm9::chr15:75329148..75329155,+#_7c326baff5045da379d5709bce71ac83p@chr15:75329148..75329155, +
4.54e-44FFCP PHASE2:Mm9::chr1:87922962..87922982,+#_7c326baff5045da379d5709bce71ac83p@chr1:87922962..87922982, +
4.54e-44FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_7c326baff5045da379d5709bce71ac83p@chr8:23045782..23045791, +
4.54e-44FFCP PHASE2:Mm9::chr14:69116075..69116107,-#_7c326baff5045da379d5709bce71ac83p@chr14:69116075..69116107, -
4.54e-44FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_7c326baff5045da379d5709bce71ac83p3@9230104L09Rik