DOID:5409: Difference between revisions
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{{DOID | {{DOID | ||
| | |alt_id= | ||
|comment=OMIM mapping confirmed by DO. [SN]. | |comment=OMIM mapping confirmed by DO. [SN]. | ||
|created_by= | |created_by= | ||
| | |def= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=DOID:5409 | |||
|is_a=DOID:3905 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=lung small cell carcinoma | |||
|namespace=disease_ontology | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | |property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo | ||
| | |subset= | ||
| | |synonym="Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006];;"SCLC" EXACT [CSP2005:2017-6589];;"small cell carcinoma of lung" RELATED [];;"small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001];;"small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
|union_of= | |||
|xref=MSH:D055752;;NCI:C4917;;OMIM:182280;;SNOMEDCT_2010_1_31:254632001;;SNOMEDCT_2010_1_31:254633006;;UMLS_CUI:C0149925 | |||
}} | }} | ||
Revision as of 10:36, 12 September 2014
| Name: | lung small cell carcinoma | ||
|---|---|---|---|
| Namespace: | disease_ontology | ||
| Xrefs: |
| ||
| Synonyms: |
"Oat cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254633006] "SCLC" EXACT [CSP2005:2017-6589] "small cell carcinoma of lung" RELATED [] "small cell carcinoma of lung (disorder)" EXACT [SNOMEDCT_2005_07_31:254632001] "small cell neuroendocrine carcinoma of lung" EXACT [NCI2004_11_17:C4917] | ||
| Comments: | OMIM mapping confirmed by DO. [SN]. |
Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | DOID:3905(lung carcinoma) |
|---|
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
Human (Homo sapiens)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
... further results Mouse (Mus musculus)
- 10462-106H3
- 10468-106H9
- 10502-107C7
- 10503-107C8
- 10504-107C9
- 10505-107D1
- 10506-107D2
- 10524-107F2
- 10525-107F3
- 10526-107F4
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:5409 (lung small cell carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_5a0cadd9f97072f65b901942816bde31 | p@chr6:125378873..125378876, + |
| 2.4e-66 | FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 2.4e-66 | FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_40c90676995a138ba0819dfe8db6fb93 | p@chr8:40525350..40525354, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:28572013..28572023,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:28572013..28572023, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr17:63528638..63528642,+#_5be4114e7d0131f457d60e83d77a108d | p@chr17:63528638..63528642, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:57526601..57526612,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:57526601..57526612, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:998897..998898,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:998897..998898, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:226208..226216,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:226208..226216, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:998859..998863,-#_5be4114e7d0131f457d60e83d77a108d | p@chr6:998859..998863, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:103235329..103235342,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235329..103235342, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:77129779..77129782,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:77129779..77129782, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr14:59132994..59133018,+#_5be4114e7d0131f457d60e83d77a108d | p@chr14:59132994..59133018, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:103235132..103235142,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:103235132..103235142, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:97961449..97961460,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97961449..97961460, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:68113370..68113379,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:68113370..68113379, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr12:76206813..76206837,-#_5be4114e7d0131f457d60e83d77a108d | p@chr12:76206813..76206837, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:129704201..129704232,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704201..129704232, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:39301903..39301910,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:39301903..39301910, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:138721040..138721056,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:138721040..138721056, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr4:37653629..37653673,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:37653629..37653673, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:125306070..125306106,+#_5be4114e7d0131f457d60e83d77a108d | p@chr9:125306070..125306106, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:140771120..140771128,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:140771120..140771128, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:1643561..1643566,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:1643561..1643566, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:26482694..26482710,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26482694..26482710, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:72275738..72275747,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:72275738..72275747, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:192805413..192805418,+#_5be4114e7d0131f457d60e83d77a108d | p@chr2:192805413..192805418, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:98528704..98528712,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:98528704..98528712, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr20:45418126..45418131,-#_5be4114e7d0131f457d60e83d77a108d | p@chr20:45418126..45418131, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:76563913..76563916,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76563913..76563916, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:121863383..121863387,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:121863383..121863387, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr9:97856010..97856019,+#_5be4114e7d0131f457d60e83d77a108d | p@chr9:97856010..97856019, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:31681859..31681865,-#_5be4114e7d0131f457d60e83d77a108d | p3@LY6G6E |
| 3.1e-50 | FFCP PHASE2:Hg19::chr9:9763035..9763040,-#_5be4114e7d0131f457d60e83d77a108d | p@chr9:9763035..9763040, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:222127471..222127478,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:222127471..222127478, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:73967160..73967162,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:73967160..73967162, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:95401649..95401655,-#_5be4114e7d0131f457d60e83d77a108d | p3@ENST00000463799 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98108435..98108438,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98108435..98108438, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:1991867..1991875,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:1991867..1991875, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr21:38295313..38295326,-#_5be4114e7d0131f457d60e83d77a108d | p@chr21:38295313..38295326, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr6:125547084..125547089,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:125547084..125547089, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:10085799..10085809,+#_5be4114e7d0131f457d60e83d77a108d | p@chr18:10085799..10085809, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:146890999..146891017,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:146890999..146891017, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:194808375..194808396,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:194808375..194808396, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:29213480..29213487,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:29213480..29213487, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:81460545..81460547,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:81460545..81460547, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:100549773..100549807,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:100549773..100549807, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:241625475..241625482,+#_5be4114e7d0131f457d60e83d77a108d | p8@ENST00000407635 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:168756303..168756308,+#_5be4114e7d0131f457d60e83d77a108d | p1@MGC4473 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:129703430..129703445,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129703430..129703445, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr1:168756079..168756087,+#_5be4114e7d0131f457d60e83d77a108d | p3@ENST00000420691 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr16:50553120..50553126,-#_5be4114e7d0131f457d60e83d77a108d | p@chr16:50553120..50553126, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr18:37331745..37331763,-#_5be4114e7d0131f457d60e83d77a108d | p@chr18:37331745..37331763, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr15:62007373..62007374,-#_5be4114e7d0131f457d60e83d77a108d | p2@ENST00000559590 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr19:46531131..46531136,+#_5be4114e7d0131f457d60e83d77a108d | p@chr19:46531131..46531136, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:65821760..65821780,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:65821760..65821780, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:97443927..97443947,+#_5be4114e7d0131f457d60e83d77a108d | p@chrX:97443927..97443947, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:79097476..79097484,+#_5be4114e7d0131f457d60e83d77a108d | p@chr5:79097476..79097484, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:199134722..199134729,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:199134722..199134729, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr13:76694533..76694542,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:76694533..76694542, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:29212181..29212188,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:29212181..29212188, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:26155734..26155742,+#_5be4114e7d0131f457d60e83d77a108d | p@chr13:26155734..26155742, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:111234799..111234807,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:111234799..111234807, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:185426203..185426209,-#_5be4114e7d0131f457d60e83d77a108d | p@chr4:185426203..185426209, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr3:86703174..86703181,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86703174..86703181, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:220594730..220594748,+#_5be4114e7d0131f457d60e83d77a108d | p2@ENST00000442416 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:97961177..97961185,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97961177..97961185, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr1:100110851..100110860,+#_5be4114e7d0131f457d60e83d77a108d | p@chr1:100110851..100110860, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:86703134..86703137,-#_5be4114e7d0131f457d60e83d77a108d | p@chr3:86703134..86703137, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:220594700..220594702,+#_5be4114e7d0131f457d60e83d77a108d | p6@ENST00000442416 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:60194070..60194083,-#_5be4114e7d0131f457d60e83d77a108d | p25@RTN1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:98070371..98070384,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98070371..98070384, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:98065877..98065881,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:98065877..98065881, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:79840323..79840338,+#_5be4114e7d0131f457d60e83d77a108d | p@chr7:79840323..79840338, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:186548894..186548902,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:186548894..186548902, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr17:39140424..39140431,-#_5be4114e7d0131f457d60e83d77a108d | p4@KRT40 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr2:8803669..8803680,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:8803669..8803680, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr21:26151976..26151979,+#_5be4114e7d0131f457d60e83d77a108d | p@chr21:26151976..26151979, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr13:95133382..95133389,-#_5be4114e7d0131f457d60e83d77a108d | p@chr13:95133382..95133389, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr4:6324309..6324314,-#_5be4114e7d0131f457d60e83d77a108d | p43@PPP2R2C |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:97626580..97626585,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:97626580..97626585, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr15:36739964..36739979,-#_5be4114e7d0131f457d60e83d77a108d | p@chr15:36739964..36739979, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr6:154858693..154858698,+#_5be4114e7d0131f457d60e83d77a108d | p@chr6:154858693..154858698, + |
| 3.1e-50 | FFCP PHASE2:Hg19::chr8:57526601..57526612,+#_5be4114e7d0131f457d60e83d77a108d | p@chr8:57526601..57526612, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr19:46763326..46763349,+#_5be4114e7d0131f457d60e83d77a108d | p@chr19:46763326..46763349, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:69542573..69542578,+#_5be4114e7d0131f457d60e83d77a108d | p@chrX:69542573..69542578, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr7:26590563..26590574,-#_5be4114e7d0131f457d60e83d77a108d | p@chr7:26590563..26590574, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr5:33650078..33650111,-#_5be4114e7d0131f457d60e83d77a108d | p@chr5:33650078..33650111, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:208001650..208001675,-#_5be4114e7d0131f457d60e83d77a108d | p@chr2:208001650..208001675, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr2:130564567..130564572,-#_5be4114e7d0131f457d60e83d77a108d | p2@LOC100131048 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr3:78360522..78360543,+#_5be4114e7d0131f457d60e83d77a108d | p@chr3:78360522..78360543, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr11:67402354..67402359,-#_5be4114e7d0131f457d60e83d77a108d | p@chr11:67402354..67402359, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr14:58439259..58439262,-#_5be4114e7d0131f457d60e83d77a108d | p@chr14:58439259..58439262, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr11:98528704..98528712,+#_5be4114e7d0131f457d60e83d77a108d | p@chr11:98528704..98528712, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chr8:97972117..97972120,-#_5be4114e7d0131f457d60e83d77a108d | p@chr8:97972117..97972120, - |
| 3.1e-50 | FFCP PHASE1:Hg19::chr5:134915254..134915270,-#_5be4114e7d0131f457d60e83d77a108d | p3@CXCL14 |
| 3.1e-50 | FFCP PHASE2:Hg19::chr7:79765099..79765103,+#_5be4114e7d0131f457d60e83d77a108d | p29@GNAI1 |
| 3.1e-50 | FFCP PHASE1:Hg19::chr10:65730100..65730104,-#_5be4114e7d0131f457d60e83d77a108d | p@chr10:65730100..65730104, - |
| 3.1e-50 | FFCP PHASE2:Hg19::chr10:129704562..129704569,+#_5be4114e7d0131f457d60e83d77a108d | p@chr10:129704562..129704569, + |
| 3.1e-50 | FFCP PHASE1:Hg19::chrX:135761853..135761876,-#_5be4114e7d0131f457d60e83d77a108d | p@chrX:135761853..135761876, - |
