Personal tools

UBERON:0003067

From FANTOM5_SSTAR

Revision as of 17:03, 26 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:dorsolateral placode
Definition:"Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
Xrefs:
links:

TAO:0001310
VHOG:0000103
XAO:0000187

ZFA:0001310
Synonyms: "dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
Alt_id: UBERON:XAO_0000187-ZFA_0001310

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009955(neurogenic placode)



Children

is a:UBERON:0003069 (otic placode)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003067 (dorsolateral placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_6f69956b8073250c371333dfea6820cep@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_6f69956b8073250c371333dfea6820cep@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_6f69956b8073250c371333dfea6820cep3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_6f69956b8073250c371333dfea6820cep@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_6f69956b8073250c371333dfea6820cep@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_6f69956b8073250c371333dfea6820cep@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_6f69956b8073250c371333dfea6820cep@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_6f69956b8073250c371333dfea6820cep@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_6f69956b8073250c371333dfea6820cep@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_6f69956b8073250c371333dfea6820cep@chr18:42158627..42158630, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_6f69956b8073250c371333dfea6820cep@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_6f69956b8073250c371333dfea6820cep9@Otof
1.87e-86FFCP PHASE1:Mm9::chr14:31283072..31283081,-#_6f69956b8073250c371333dfea6820cep@chr14:31283072..31283081, -
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_6f69956b8073250c371333dfea6820cep@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_6f69956b8073250c371333dfea6820cep@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_6f69956b8073250c371333dfea6820cep@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_6f69956b8073250c371333dfea6820cep@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_6f69956b8073250c371333dfea6820cep@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_6f69956b8073250c371333dfea6820cep@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_6f69956b8073250c371333dfea6820cep@chr14:63099970..63099980, -
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_6f69956b8073250c371333dfea6820cep@chr11:114603036..114603048, +
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_6f69956b8073250c371333dfea6820cep@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_6f69956b8073250c371333dfea6820cep2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_6f69956b8073250c371333dfea6820cep@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_6f69956b8073250c371333dfea6820cep2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_6f69956b8073250c371333dfea6820cep@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_6f69956b8073250c371333dfea6820cep@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_6f69956b8073250c371333dfea6820cep@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_6f69956b8073250c371333dfea6820cep@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_6f69956b8073250c371333dfea6820cep@chr3:35012397..35012405, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_6f69956b8073250c371333dfea6820cep3@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_6f69956b8073250c371333dfea6820cep@chr17:13983102..13983126, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_6f69956b8073250c371333dfea6820cep2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_6f69956b8073250c371333dfea6820cep@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_6f69956b8073250c371333dfea6820cep@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_6f69956b8073250c371333dfea6820cep@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_6f69956b8073250c371333dfea6820cep@chr11:4689837..4689845, -
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_6f69956b8073250c371333dfea6820cep@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_6f69956b8073250c371333dfea6820cep3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_6f69956b8073250c371333dfea6820cep@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_6f69956b8073250c371333dfea6820cep@chr5:28035962..28035983, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_6f69956b8073250c371333dfea6820cep@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_6f69956b8073250c371333dfea6820cep@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_6f69956b8073250c371333dfea6820cep@chr11:11599532..11599539, -
1.87e-86FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_6f69956b8073250c371333dfea6820cep@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_6f69956b8073250c371333dfea6820cep@chr9:42206730..42206739, -
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_6f69956b8073250c371333dfea6820cep1@Dytn
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_6f69956b8073250c371333dfea6820cep2@Espnl
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_6f69956b8073250c371333dfea6820cep@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_6f69956b8073250c371333dfea6820cep@chr4:154208086..154208123, +
1.87e-86FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_6f69956b8073250c371333dfea6820cep@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_6f69956b8073250c371333dfea6820cep@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_6f69956b8073250c371333dfea6820cep@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_6f69956b8073250c371333dfea6820cep@chr13:48087761..48087775, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_6f69956b8073250c371333dfea6820cep1@Tomt
1.87e-86FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_6f69956b8073250c371333dfea6820cep@chr2:152453066..152453075, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_6f69956b8073250c371333dfea6820cep2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_6f69956b8073250c371333dfea6820cep7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_6f69956b8073250c371333dfea6820cep@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_6f69956b8073250c371333dfea6820cep1@Kcna10
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_6f69956b8073250c371333dfea6820cep@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_6f69956b8073250c371333dfea6820cep4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_6f69956b8073250c371333dfea6820cep1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_6f69956b8073250c371333dfea6820cep@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_6f69956b8073250c371333dfea6820cep1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_6f69956b8073250c371333dfea6820cep@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_6f69956b8073250c371333dfea6820cep@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_6f69956b8073250c371333dfea6820cep2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_6f69956b8073250c371333dfea6820cep@chr1:172843885..172843890, -
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_6f69956b8073250c371333dfea6820cep7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_6f69956b8073250c371333dfea6820cep@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_6f69956b8073250c371333dfea6820cep5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_6f69956b8073250c371333dfea6820cep1@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_6f69956b8073250c371333dfea6820cep5@BC030867
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_6f69956b8073250c371333dfea6820cep@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_6f69956b8073250c371333dfea6820cep4@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_6f69956b8073250c371333dfea6820cep@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_6f69956b8073250c371333dfea6820cep@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_6f69956b8073250c371333dfea6820cep1@Strc
1.87e-86FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_6f69956b8073250c371333dfea6820cep@chrX:154140800..154140810, +
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_6f69956b8073250c371333dfea6820cep10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_6f69956b8073250c371333dfea6820cep@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_6f69956b8073250c371333dfea6820cep4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_6f69956b8073250c371333dfea6820cep@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_6f69956b8073250c371333dfea6820cep1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_6f69956b8073250c371333dfea6820cep@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_6f69956b8073250c371333dfea6820cep@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_6f69956b8073250c371333dfea6820cep@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_6f69956b8073250c371333dfea6820cep@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_6f69956b8073250c371333dfea6820cep4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_6f69956b8073250c371333dfea6820cep9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_6f69956b8073250c371333dfea6820cep@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_6f69956b8073250c371333dfea6820cep@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_6f69956b8073250c371333dfea6820cep4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_6f69956b8073250c371333dfea6820cep21@Espn
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_6f69956b8073250c371333dfea6820cep2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_6f69956b8073250c371333dfea6820cep@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_6f69956b8073250c371333dfea6820cep@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_6f69956b8073250c371333dfea6820cep5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_6f69956b8073250c371333dfea6820cep@chr5:3909290..3909299, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0003067&oldid=1835819"