UBERON:0006553: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0006553
|name=renal duct
|namespace=
|def="A tube in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9]
|xref=ZFA:0005289
|is_a=UB...") |
No edit summary |
||
| Line 21: | Line 21: | ||
|part_of=UBERON:0002113 | |part_of=UBERON:0002113 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:24, 15 June 2012
| Name: | renal duct | ||
|---|---|---|---|
| Definition: | "A tube in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9] | ||
| Xrefs: |
| ||
| Comments: | in ZFA this is defined as part of mesonephros |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000058(duct),UBERON:0004120(mesoderm-derived structure),UBERON:0006554(urinary system structure) |
|---|---|
| part_of: | UBERON:0002113(kidney) |
Children
| is a: | UBERON:0009201 (nephric duct) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006553 (renal duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.58e-86 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268 | p4@Spink12 |
| 1.58e-86 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268 | p4@Spink12 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:126591032..126591039,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:126591032..126591039, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:167688595..167688624,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:167688595..167688624, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr17:35249011..35249020,-#_9b3409e528ac533dfd8475c41e23287d | p@chr17:35249011..35249020, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr12:103896072..103896081,-#_9b3409e528ac533dfd8475c41e23287d | p@chr12:103896072..103896081, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:148625223..148625234,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:148625223..148625234, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89597834..89597840,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:89597834..89597840, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:90155923..90155932, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_9b3409e528ac533dfd8475c41e23287d | p@chr7:151928014..151928021, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:49817766..49817772,-#_9b3409e528ac533dfd8475c41e23287d | p@chr6:49817766..49817772, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:25706249..25706254,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:25706249..25706254, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379098..21379104,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379098..21379104, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_9b3409e528ac533dfd8475c41e23287d | p@chr9:100350777..100350782, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87936238..87936249,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:87936238..87936249, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:75866210..75866235, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379065..21379072, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:70761931..70761971,+#_9b3409e528ac533dfd8475c41e23287d | p@chr9:70761931..70761971, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_9b3409e528ac533dfd8475c41e23287d | p3@Glb1l2 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:44261480..44261486,+#_9b3409e528ac533dfd8475c41e23287d | p@chr18:44261480..44261486, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:87922962..87922982, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_9b3409e528ac533dfd8475c41e23287d | p@chr8:19141471..19141518, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:110773718..110773729,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:110773718..110773729, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:116901496..116901514,-#_9b3409e528ac533dfd8475c41e23287d | p1@ENSMUST00000150628, p1@ENSMUST00000152401, p1@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:16664775..16664784,+#_9b3409e528ac533dfd8475c41e23287d | p@chr12:16664775..16664784, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:18338054..18338077,-#_9b3409e528ac533dfd8475c41e23287d | p@chr6:18338054..18338077, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:100634942..100634968,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:100634942..100634968, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:112721323..112721328,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:112721323..112721328, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:152302813..152302821,+#_9b3409e528ac533dfd8475c41e23287d | p3@Defb20 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:83487114..83487124,-#_9b3409e528ac533dfd8475c41e23287d | p@chr6:83487114..83487124, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:134893699..134893708,+#_9b3409e528ac533dfd8475c41e23287d | p@chr4:134893699..134893708, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_9b3409e528ac533dfd8475c41e23287d | p11@Prrx1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr18:62775330..62775347,-#_9b3409e528ac533dfd8475c41e23287d | p@chr18:62775330..62775347, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:50280181..50280192,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:50280181..50280192, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:12571679..12571688,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:12571679..12571688, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379972..31379981,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379972..31379981, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21385729..21385768,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21385729..21385768, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:54678902..54678911,-#_9b3409e528ac533dfd8475c41e23287d | p@chr15:54678902..54678911, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_9b3409e528ac533dfd8475c41e23287d | p5@9230104L09Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379437..31379448,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379437..31379448, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr15:75304900..75304907,+#_9b3409e528ac533dfd8475c41e23287d | p@chr15:75304900..75304907, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26785438..26785446,-#_9b3409e528ac533dfd8475c41e23287d | p3@Acad8 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:52608712..52608739,+#_9b3409e528ac533dfd8475c41e23287d | p11@Arhgef40 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:164464249..164464258,-#_9b3409e528ac533dfd8475c41e23287d | p@chr2:164464249..164464258, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379372..21379404, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:158083961..158083968,+#_9b3409e528ac533dfd8475c41e23287d | p4@Bpi |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:25677632..25677636,-#_9b3409e528ac533dfd8475c41e23287d | p@chr2:25677632..25677636, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:69116075..69116107,-#_9b3409e528ac533dfd8475c41e23287d | p@chr14:69116075..69116107, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:130496166..130496188,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:130496166..130496188, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:75798097..75798101, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26731771..26731780,-#_9b3409e528ac533dfd8475c41e23287d | p@chr9:26731771..26731780, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:22061771..22061777,-#_9b3409e528ac533dfd8475c41e23287d | p3@Gm6040, p3@LOC100503992 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:107731917..107731926,-#_9b3409e528ac533dfd8475c41e23287d | p@chr3:107731917..107731926, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:110773718..110773729,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:110773718..110773729, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_9b3409e528ac533dfd8475c41e23287d | p4@Bpi |
| 3.28e-58 | FFCP PHASE2:Mm9::chr3:103650817..103650825,+#_9b3409e528ac533dfd8475c41e23287d | p@chr3:103650817..103650825, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:101958844..101958851,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101958844..101958851, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:155738967..155738974,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:155738967..155738974, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_9b3409e528ac533dfd8475c41e23287d | p3@uc007mmw.1 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr7:65995799..65995810,-#_9b3409e528ac533dfd8475c41e23287d | p@chr7:65995799..65995810, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:85390145..85390153,+#_9b3409e528ac533dfd8475c41e23287d | p@chr10:85390145..85390153, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr5:31379377..31379384,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379377..31379384, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164479340..164479350,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:164479340..164479350, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr13:21379430..21379437,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379430..21379437, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:151927980..151927988,+#_9b3409e528ac533dfd8475c41e23287d | p@chr7:151927980..151927988, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr12:103896072..103896081,-#_9b3409e528ac533dfd8475c41e23287d | p@chr12:103896072..103896081, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chrX:75798132..75798152,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:75798132..75798152, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:156829476..156829504,+#_9b3409e528ac533dfd8475c41e23287d | p@chrX:156829476..156829504, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr18:62775330..62775347,-#_9b3409e528ac533dfd8475c41e23287d | p@chr18:62775330..62775347, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr8:19141482..19141496,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:19141482..19141496, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:152388977..152388983,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:152388977..152388983, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:90155923..90155932,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:90155923..90155932, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:91753336..91753348,-#_9b3409e528ac533dfd8475c41e23287d | p@chr10:91753336..91753348, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:90368977..90368987,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:90368977..90368987, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:25678985..25679033,+#_9b3409e528ac533dfd8475c41e23287d | p@chr2:25678985..25679033, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:35651807..35651818,-#_9b3409e528ac533dfd8475c41e23287d | p3@9230110F15Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:164439019..164439029,+#_9b3409e528ac533dfd8475c41e23287d | p1@Wfdc6b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:113585667..113585673,-#_9b3409e528ac533dfd8475c41e23287d | p@chr8:113585667..113585673, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr9:26719400..26719404,-#_9b3409e528ac533dfd8475c41e23287d | p@chr9:26719400..26719404, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51734060..51734066,+#_9b3409e528ac533dfd8475c41e23287d | p5@Eddm3b |
| 3.28e-58 | FFCP PHASE1:Mm9::chr13:21379159..21379162,-#_9b3409e528ac533dfd8475c41e23287d | p@chr13:21379159..21379162, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:52542831..52542836,-#_9b3409e528ac533dfd8475c41e23287d | p4@Rnase13 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_9b3409e528ac533dfd8475c41e23287d | p@chr15:83143938..83143953, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr14:63611214..63611229,+#_9b3409e528ac533dfd8475c41e23287d | p@chr14:63611214..63611229, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:31379845..31379855, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:101958844..101958851,-#_9b3409e528ac533dfd8475c41e23287d | p@chr11:101958844..101958851, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_9b3409e528ac533dfd8475c41e23287d | p@chr9:26611214..26611227, - |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:17224952..17224968,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:17224952..17224968, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:89596972..89596981, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr4:137325863..137325870,-#_9b3409e528ac533dfd8475c41e23287d | p15@Alpl |
| 3.28e-58 | FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:11079838..11079844, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr5:35930706..35930717,+#_9b3409e528ac533dfd8475c41e23287d | p@chr5:35930706..35930717, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr11:53955299..53955306,+#_9b3409e528ac533dfd8475c41e23287d | p@chr11:53955299..53955306, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_9b3409e528ac533dfd8475c41e23287d | p@chr8:96014490..96014496, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr4:137325863..137325870,-#_9b3409e528ac533dfd8475c41e23287d | p15@Alpl |
| 3.28e-58 | FFCP PHASE2:Mm9::chr1:87922778..87922788,+#_9b3409e528ac533dfd8475c41e23287d | p@chr1:87922778..87922788, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr7:65995799..65995810,-#_9b3409e528ac533dfd8475c41e23287d | p@chr7:65995799..65995810, - |
| 3.28e-58 | FFCP PHASE1:Mm9::chr14:51676936..51676963,-#_9b3409e528ac533dfd8475c41e23287d | p6@Rnase12 |
| 3.28e-58 | FFCP PHASE2:Mm9::chr11:98567868..98567884,-#_9b3409e528ac533dfd8475c41e23287d | p5@Med24 |
| 3.28e-58 | FFCP PHASE2:Mm9::chrX:130496166..130496188,-#_9b3409e528ac533dfd8475c41e23287d | p@chrX:130496166..130496188, - |
