Personal tools

UBERON:0004819: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 18: Line 18:
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=
|part_of=UBERON:0002113
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 13:37, 27 June 2012

Name:kidney epithelium
Definition:"An epithelium that is part of a kidney [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0000059

MA:0002846
Synonyms: "epithelial tissue of kidney" EXACT [OBOL:automatic]
"epithelium of kidney" EXACT [OBOL:automatic]
"kidney epithelial tissue" EXACT [OBOL:automatic]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000483(epithelium),UBERON:0006554(urinary system structure)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0004211 (nephron epithelium),UBERON:0005103 (mesonephric epithelium),UBERON:0007684 (uriniferous tubule),UBERON:0009201 (nephric duct),UBERON:0010532 (primitive nephron)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004819 (kidney epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
7.12e-98FFCP PHASE2:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71p@chr2:693380..693398, +
7.12e-98FFCP PHASE1:Hg19::chr2:693380..693398,+#_1868c186a95c8eef7c0db8b66793fc71p@chr2:693380..693398, +
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9p4@Spink12
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e3acb649e6ba95cc98f907151a7b6ec9p4@Spink12
2.81e-78FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2cp4@MEGF11
2.81e-78FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_5243cedb1a63bb86c20184431a943b2cp4@MEGF11
1.04e-71FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4p4@PAX2
1.04e-71FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_f0420a0e0d7713309c4c9115ae9af7f4p4@PAX2
1.28e-69FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136p7@HOXA10
1.28e-69FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_d728005e93f2ad3af682d70bd4afa136p7@HOXA10
4.01e-67FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186p3@PAX2
4.01e-67FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_53dd074c72172b8e49af0f67c43b3186p3@PAX2
1.1e-61FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0cp@chr1:1100457..1100470, +
1.1e-61FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_6595967e0c006e11c541b9e823d56e0cp@chr1:1100457..1100470, +
3.28e-58FFCP PHASE2:Mm9::chr2:25349414..25349424,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp5@Lcn12
3.28e-58FFCP PHASE2:Mm9::chr2:164439019..164439029,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp1@Wfdc6b
3.28e-58FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:26704579..26704582, -
3.28e-58FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr6:118298429..118298448, +
3.28e-58FFCP PHASE1:Mm9::chr1:90155951..90155962,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:90155951..90155962, +
3.28e-58FFCP PHASE2:Mm9::chr17:14306714..14306740,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr17:14306714..14306740, +
3.28e-58FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:23045782..23045791, +
3.28e-58FFCP PHASE2:Mm9::chr2:148676859..148676866,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp5@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr1:155697874..155697885,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:155697874..155697885, -
3.28e-58FFCP PHASE2:Mm9::chr3:103650758..103650778,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr3:103650758..103650778, +
3.28e-58FFCP PHASE2:Mm9::chr10:127470322..127470326,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr10:127470322..127470326, +
3.28e-58FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Gm3428
3.28e-58FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:43230846..43230884, +
3.28e-58FFCP PHASE2:Mm9::chr4:40010825..40010844,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr4:40010825..40010844, -
3.28e-58FFCP PHASE2:Mm9::chr10:56515486..56515496,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr10:56515486..56515496, +
3.28e-58FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:113585714..113585722, -
3.28e-58FFCP PHASE2:Mm9::chr8:113585714..113585722,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:113585714..113585722, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379306..21379315,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21379306..21379315, -
3.28e-58FFCP PHASE2:Mm9::chr9:35651788..35651804,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp1@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chr2:172632171..172632178,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr2:172632171..172632178, -
3.28e-58FFCP PHASE2:Mm9::chr2:167480413..167480463,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr2:167480413..167480463, -
3.28e-58FFCP PHASE1:Mm9::chr3:107731917..107731926,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr3:107731917..107731926, -
3.28e-58FFCP PHASE2:Mm9::chr1:89597725..89597743,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:89597725..89597743, +
3.28e-58FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:130496372..130496393, -
3.28e-58FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:23683348..23683398, +
3.28e-58FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr12:114385720..114385732, -
3.28e-58FFCP PHASE2:Mm9::chr16:25752228..25752237,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:25752228..25752237, +
3.28e-58FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:65941913..65941923, -
3.28e-58FFCP PHASE2:Mm9::chr9:34813361..34813403,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:34813361..34813403, -
3.28e-58FFCP PHASE1:Mm9::chrX:20219008..20219045,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:20219008..20219045, +
3.28e-58FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr2:160573065..160573077, +
3.28e-58FFCP PHASE1:Mm9::chr9:35585507..35585517,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp4@Gm17727
3.28e-58FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@Rnase10
3.28e-58FFCP PHASE1:Mm9::chr1:168436322..168436326,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:168436322..168436326, -
3.28e-58FFCP PHASE1:Mm9::chr14:51677141..51677148,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr13:21378927..21378932,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21378927..21378932, -
3.28e-58FFCP PHASE2:Mm9::chrX:103276578..103276585,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:103276578..103276585, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379118..21379120,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21379118..21379120, -
3.28e-58FFCP PHASE2:Mm9::chr9:35585507..35585517,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp4@Gm17727
3.28e-58FFCP PHASE1:Mm9::chr2:152302739..152302742,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp5@Defb20
3.28e-58FFCP PHASE1:Mm9::chr11:98567868..98567884,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp5@Med24
3.28e-58FFCP PHASE1:Mm9::chr11:101958855..101958871,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:101958855..101958871, -
3.28e-58FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr18:74784728..74784738, +
3.28e-58FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:26688157..26688159, -
3.28e-58FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chrX:130496286..130496293, -
3.28e-58FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103746280..103746298,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr14:103746280..103746298, +
3.28e-58FFCP PHASE1:Mm9::chr5:77645280..77645295,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:77645280..77645295, -
3.28e-58FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:89597660..89597668, +
3.28e-58FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:19141371..19141383, +
3.28e-58FFCP PHASE1:Mm9::chr17:73221062..73221084,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr17:73221062..73221084, +
3.28e-58FFCP PHASE1:Mm9::chr13:52712765..52712772,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:52712765..52712772, +
3.28e-58FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:192816674..192816714, +
3.28e-58FFCP PHASE2:Mm9::chr6:118298429..118298448,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr6:118298429..118298448, +
3.28e-58FFCP PHASE1:Mm9::chr2:160573108..160573123,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr2:160573108..160573123, +
3.28e-58FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:20817297..20817313, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@uc007mmw.1
3.28e-58FFCP PHASE1:Mm9::chr2:74440187..74440209,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr2:74440187..74440209, -
3.28e-58FFCP PHASE1:Mm9::chr1:156048695..156048707,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:156048695..156048707, +
3.28e-58FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21378871..21378901, -
3.28e-58FFCP PHASE1:Mm9::chr5:31379550..31379559,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:31379550..31379559, +
3.28e-58FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr10:91753336..91753348, -
3.28e-58FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:52712744..52712754, +
3.28e-58FFCP PHASE2:Mm9::chr2:74440187..74440209,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr2:74440187..74440209, -
3.28e-58FFCP PHASE2:Mm9::chr9:26611214..26611227,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:26611214..26611227, -
3.28e-58FFCP PHASE1:Mm9::chr2:152302813..152302821,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Defb20
3.28e-58FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr14:63611201..63611210, +
3.28e-58FFCP PHASE1:Mm9::chr13:21381777..21381789,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21381777..21381789, -
3.28e-58FFCP PHASE2:Mm9::chr5:31379477..31379481,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:31379477..31379481, +
3.28e-58FFCP PHASE2:Mm9::chr8:19141471..19141518,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr8:19141471..19141518, -
3.28e-58FFCP PHASE1:Mm9::chr9:26730625..26730636,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp3@Gm1110
3.28e-58FFCP PHASE1:Mm9::chr16:25752183..25752203,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr16:25752183..25752203, +
3.28e-58FFCP PHASE1:Mm9::chr14:66589365..66589371,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp19@Clu
3.28e-58FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp2@ENSMUST00000152401
3.28e-58FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:155722142..155722175, -
3.28e-58FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr11:101958876..101958883, +
3.28e-58FFCP PHASE1:Mm9::chr5:31377177..31377184,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr5:31377177..31377184, +
3.28e-58FFCP PHASE1:Mm9::chr15:54678983..54678995,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr15:54678983..54678995, -
3.28e-58FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr9:70761931..70761971, +
3.28e-58FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr4:150092027..150092070,-#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr4:150092027..150092070, -
3.28e-58FFCP PHASE1:Mm9::chr3:103650730..103650741,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr3:103650730..103650741, +
3.28e-58FFCP PHASE1:Mm9::chr1:36016859..36016897,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr1:36016859..36016897, +
3.28e-58FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr7:151928014..151928021, +
3.28e-58FFCP PHASE1:Mm9::chr13:21385729..21385768,+#_0eb222a7b0b4ea34ae56f51e3d641a5bp@chr13:21385729..21385768, +