FFCP PHASE1:Mm9::chr4:122959994..122960005,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr4:122959994..122960005,+ | |id=chr4:122959994..122960005,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!7.89e-08!33 | |ontology_enrichment_uberon=UBERON:0004872!7.89e-08!33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,5.54e-08,33;UBERON:0007100,1.78e-07,18;UBERON:0000948,1.78e-07,18;UBERON:0005498,1.78e-07,18;UBERON:0004140,1.78e-07,18;UBERON:0009881,1.78e-07,18;UBERON:0004141,1.78e-07,18;UBERON:0003084,1.78e-07,18;UBERON:0007005,1.78e-07,18;UBERON:0004139,1.78e-07,18;UBERON:0004291,1.78e-07,18;UBERON:0003914,3.77e-07,47 | |||
|phase1_expression=0.320297694209588,0,0,0.90739263392049,0,0.503637815735669,0.700837921786577,0,3.801295498095,5.61754863172784,2.73948749160808,3.90883579077148,0.171200729931206,0.174840804837995,2.99798785634096,10.7311891716608,13.2916756844348,1.26184866143295,0.959801035240171,2.97072756258621,0.425216450755349,1.48936426801328,1.04479915655574,0.319984845586813,0.91763712426868,0,0,0.430942465371778,0.380046838912748,0,0.665191531965914,1.27006134691926,0,15.8481681015439,1.44425809875637,0,0.612508068787107,0.837063261473815,0,0.523523743973798,0,0,0,0.503587271902309,0.608261587317087,0.550640256485045,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,0,2.01339127269284,0,1.00828139742739,1.54355661621568,0.573066879877513,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.540023753326763,0.630974884054146,0.285650984403804,0,0.122490799214954,0.287536413054709,0,0,0.383062014255563,0.307213066512487,1.05509030184155,0.274462930807229,1.04182674111352,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0.931997229126503,1.21161909333094,0.604572480854284,0.579728977403356,0,1.3599426674155,1.07940638327563,0.649776417447669,0.448026887097336,0.983110940922263,0.681721290312231,1.03914401841148,0.35333957451034,0.704217098883403,1.28326477414318,0,0,1.08245520505607,1.01343946190039,1.51657333504435,0.68510327831436,0.776813650941515,0.445326417194474,1.90833859442749,2.74018930480927,1.15307748628029,0.904335843315735,1.05829836422134,0.376999773989026,0.494389935468748,2.60278842455841,2.65383165584962,1.29413479957927,3.09178125844551,3.87900202508178,1.86391761218122,0,0.209446706813455,0,2.75574786363617,0.599902730993408,2.54140454146129,0.149790639404823,0,0.251308704225729,0.347648640384553,0,0,0.162241263067758,0.712875546952214,1.8661045591514,0.252722758433675,1.26265113531884,0.910843100738926,1.14951052216736,1.80062129805349,0.60281927134286,1.08858398642125,0.384341160854549,0.562210347358373,0.517406741478031,1.5089759505299,1.32374256117473,0.703804496655795,0.657587197282725,0.556094498451196,0.348252166522167,0.823128545631774,0.796137067273973,2.1066395619397,1.28673953557358,1.13665399758237,2.07125772535502,1.64168241986767,1.44049649168812,2.3674473558521,1.18058539048442,2.1597395804233,2.32533944750408,2.95100741539581,1.98501082024188,2.46839774870221,3.11918181750281,2.26992666728396,3.21639972335731,3.07370161407471,2.81833479396781,0.210289948564127,0.205809224758569,0,0.264450566663544,0.853153002140936,2.09013004674395,1.15980715189884,0.80673409849337,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0.398282546508734,1.13800740571849,1.25673363870702,4.50830942692322,0.203651327845314,0.775809948670503,0.420814919341911,0.569128834118316,0.442830443938806,0.627994911365499,0.863780147452604,0.592905254174298,4.83850806576673,7.66580080941492,6.52100125916076,7.50582449137461,6.99413763282009,5.85639459097266,3.74004978686054,2.7562988551756,0.823684239564244,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,1.07638448113147,0,0,0.757965647081939,0.651859905768103,1.35796068620151,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,2.20749397043786,0.160550589987792,0.468846746368813,2.29508923527346,4.54447668967871,1.26203287766503,0,0.861693590931196,0.716906393857656,0.222798674082394,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,0,0.425820255624806,1.06839362200353,1.62886959353576,0.659880491890142,1.32745138339963,2.91336763385978,1.209294227859,0.943025398779491,1.47650946440386,1.84461088766356,0.516856586336442,0.727067458955011,0.712994756769443,1.58018378967908,1.05418608574999,1.03135543248187,1.70219802876894,0.720244376125241,0.646793418913773,0.643011105094777,1.24138163549592,0.891844088010353,0.329098041204242,0.304464949114599,0.938686832254841,0.63549621259146,0.661585194164886,0.65954501176592,0.807322133479528,0.422190474497091,0.238744688006273,0.492422699235184,0.291480836629851,0.370850604021019,5.29699730473343,1.65109494370578,3.70389054739423,8.2882121082064,10.1153728513559,8.00723606222829,0.679913719975421,1.95932033253121,1.93479963326193,0,1.89801596148681,1.01659733563424,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.661227645802687,0.26175594198403,0.259229946583586,0.621339313086926,0,1.64468200648377,0.992750942742586,0.777804753376191,0.645799117388655,1.01373675294467,0.821500670520278,0.13020438484395,1.57289016638566,0.483168241652012,0.864090018773596,0.632022241256357,0.405450430580328,1.23253148597793,0.77952493786677,0.537080087002444,0.198681354781265,0.240390899039938,0.443068581523732,0.605798699688886,0.457240839929999,1.20991422164209,0.194915761479505,0.577271049841977,0.467507608726276,2.94749498699775,3.32978930061097,3.49884040776955,1.00730769818447,0.386379188064381,0.375364950902364,0.73260649706906,0.428736758158132,1.00314420807073,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,0.45032120322422,0,0,1.86817225651518,2.39414924040619,0.682934423016537,2.91728060481953,1.88651846365184,1.65459157605013,0.666740183404846,0.618105171716683,2.24643446714271,2.52697211763797,1.77435509923168,0.754505365544305,2.24739617927718,1.85672941974121,1.26358031702349,1.42888107384922,0.927074607558844,1.35036454324594,1.64834360321323,2.50238164228475,2.05721551431249,1.24233064311536,1.66905332963125,1.88950341622027,1.88218760830661,2.11536519729191,1.09756783723664,0.789209134313529,1.22223702461276,0.561142271657738,0.593175090620871,0.886540341380071,1.63692417267876,1.70430525304563,1.15743966588685,0.249810577937946,1.63752125911786,1.28922632428979,1.3390183244819,1.76473135295612,1.62307484934295 | |phase1_expression=0.320297694209588,0,0,0.90739263392049,0,0.503637815735669,0.700837921786577,0,3.801295498095,5.61754863172784,2.73948749160808,3.90883579077148,0.171200729931206,0.174840804837995,2.99798785634096,10.7311891716608,13.2916756844348,1.26184866143295,0.959801035240171,2.97072756258621,0.425216450755349,1.48936426801328,1.04479915655574,0.319984845586813,0.91763712426868,0,0,0.430942465371778,0.380046838912748,0,0.665191531965914,1.27006134691926,0,15.8481681015439,1.44425809875637,0,0.612508068787107,0.837063261473815,0,0.523523743973798,0,0,0,0.503587271902309,0.608261587317087,0.550640256485045,0,0.218025156380447,0.219686182734472,0.194429899074283,0.419959264876088,0,2.01339127269284,0,1.00828139742739,1.54355661621568,0.573066879877513,0,0.809265843438391,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.622137673850866,0.540023753326763,0.630974884054146,0.285650984403804,0,0.122490799214954,0.287536413054709,0,0,0.383062014255563,0.307213066512487,1.05509030184155,0.274462930807229,1.04182674111352,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0.931997229126503,1.21161909333094,0.604572480854284,0.579728977403356,0,1.3599426674155,1.07940638327563,0.649776417447669,0.448026887097336,0.983110940922263,0.681721290312231,1.03914401841148,0.35333957451034,0.704217098883403,1.28326477414318,0,0,1.08245520505607,1.01343946190039,1.51657333504435,0.68510327831436,0.776813650941515,0.445326417194474,1.90833859442749,2.74018930480927,1.15307748628029,0.904335843315735,1.05829836422134,0.376999773989026,0.494389935468748,2.60278842455841,2.65383165584962,1.29413479957927,3.09178125844551,3.87900202508178,1.86391761218122,0,0.209446706813455,0,2.75574786363617,0.599902730993408,2.54140454146129,0.149790639404823,0,0.251308704225729,0.347648640384553,0,0,0.162241263067758,0.712875546952214,1.8661045591514,0.252722758433675,1.26265113531884,0.910843100738926,1.14951052216736,1.80062129805349,0.60281927134286,1.08858398642125,0.384341160854549,0.562210347358373,0.517406741478031,1.5089759505299,1.32374256117473,0.703804496655795,0.657587197282725,0.556094498451196,0.348252166522167,0.823128545631774,0.796137067273973,2.1066395619397,1.28673953557358,1.13665399758237,2.07125772535502,1.64168241986767,1.44049649168812,2.3674473558521,1.18058539048442,2.1597395804233,2.32533944750408,2.95100741539581,1.98501082024188,2.46839774870221,3.11918181750281,2.26992666728396,3.21639972335731,3.07370161407471,2.81833479396781,0.210289948564127,0.205809224758569,0,0.264450566663544,0.853153002140936,2.09013004674395,1.15980715189884,0.80673409849337,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.596869416123452,0,0,0,0.398282546508734,1.13800740571849,1.25673363870702,4.50830942692322,0.203651327845314,0.775809948670503,0.420814919341911,0.569128834118316,0.442830443938806,0.627994911365499,0.863780147452604,0.592905254174298,4.83850806576673,7.66580080941492,6.52100125916076,7.50582449137461,6.99413763282009,5.85639459097266,3.74004978686054,2.7562988551756,0.823684239564244,1.43768206527355,1.11642284300551,0.312037673114561,0.252578877947112,1.07638448113147,0,0,0.757965647081939,0.651859905768103,1.35796068620151,0.704070744865506,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,2.20749397043786,0.160550589987792,0.468846746368813,2.29508923527346,4.54447668967871,1.26203287766503,0,0.861693590931196,0.716906393857656,0.222798674082394,0.283076530788832,0.809621403349789,1.75353514746787,0.395287777946524,0,0.425820255624806,1.06839362200353,1.62886959353576,0.659880491890142,1.32745138339963,2.91336763385978,1.209294227859,0.943025398779491,1.47650946440386,1.84461088766356,0.516856586336442,0.727067458955011,0.712994756769443,1.58018378967908,1.05418608574999,1.03135543248187,1.70219802876894,0.720244376125241,0.646793418913773,0.643011105094777,1.24138163549592,0.891844088010353,0.329098041204242,0.304464949114599,0.938686832254841,0.63549621259146,0.661585194164886,0.65954501176592,0.807322133479528,0.422190474497091,0.238744688006273,0.492422699235184,0.291480836629851,0.370850604021019,5.29699730473343,1.65109494370578,3.70389054739423,8.2882121082064,10.1153728513559,8.00723606222829,0.679913719975421,1.95932033253121,1.93479963326193,0,1.89801596148681,1.01659733563424,0.324016022465404,0.418176592028937,0.218362563746178,0.404593039154462,0.661227645802687,0.26175594198403,0.259229946583586,0.621339313086926,0,1.64468200648377,0.992750942742586,0.777804753376191,0.645799117388655,1.01373675294467,0.821500670520278,0.13020438484395,1.57289016638566,0.483168241652012,0.864090018773596,0.632022241256357,0.405450430580328,1.23253148597793,0.77952493786677,0.537080087002444,0.198681354781265,0.240390899039938,0.443068581523732,0.605798699688886,0.457240839929999,1.20991422164209,0.194915761479505,0.577271049841977,0.467507608726276,2.94749498699775,3.32978930061097,3.49884040776955,1.00730769818447,0.386379188064381,0.375364950902364,0.73260649706906,0.428736758158132,1.00314420807073,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,0.45032120322422,0,0,1.86817225651518,2.39414924040619,0.682934423016537,2.91728060481953,1.88651846365184,1.65459157605013,0.666740183404846,0.618105171716683,2.24643446714271,2.52697211763797,1.77435509923168,0.754505365544305,2.24739617927718,1.85672941974121,1.26358031702349,1.42888107384922,0.927074607558844,1.35036454324594,1.64834360321323,2.50238164228475,2.05721551431249,1.24233064311536,1.66905332963125,1.88950341622027,1.88218760830661,2.11536519729191,1.09756783723664,0.789209134313529,1.22223702461276,0.561142271657738,0.593175090620871,0.886540341380071,1.63692417267876,1.70430525304563,1.15743966588685,0.249810577937946,1.63752125911786,1.28922632428979,1.3390183244819,1.76473135295612,1.62307484934295 | ||
|short_description=p3@LOC100503296,p3@Pabpc4 | |short_description=p3@LOC100503296,p3@Pabpc4 | ||
}} | }} |
Revision as of 14:32, 13 November 2012
Short description: | p3@LOC100503296, p3@Pabpc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_LOC100503296_5end, CAGE_peak_3_at_Pabpc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:644 |
Association with transcript: | -62bp_to_ENSMUST00000106243_5end |
EntrezGene: | 100503296,230721 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
splanchnic layer of lateral plate mesoderm | 5.54e-08 | 33 |
primary circulatory organ | 1.78e-07 | 18 |
heart | 1.78e-07 | 18 |
primitive heart tube | 1.78e-07 | 18 |
primary heart field | 1.78e-07 | 18 |
anterior lateral plate mesoderm | 1.78e-07 | 18 |
heart tube | 1.78e-07 | 18 |
heart primordium | 1.78e-07 | 18 |
cardiac mesoderm | 1.78e-07 | 18 |
cardiogenic plate | 1.78e-07 | 18 |
heart rudiment | 1.78e-07 | 18 |
epithelial tube | 3.77e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.