FFCP PHASE1:Mm9::chr2:102654028..102654039,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr2:102654028..102654039,- | |id=chr2:102654028..102654039,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.01e-10,7;CL:0000333,1.51e-09,10;CL:0000095,1.51e-09,10;CL:0000243,1.51e-09,10;CL:0000123,1.51e-09,10;CL:0000125,1.51e-09,10;CL:0000030,1.51e-09,10;CL:0000339,1.51e-09,10;CL:0000219,1.30e-08,54;CL:0000068,1.14e-07,3;CL:0002202,1.14e-07,3;CL:0000069,1.14e-07,3;CL:0002632,1.14e-07,3;CL:0002368,1.14e-07,3;CL:0000307,1.14e-07,3;CL:0000377,1.14e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,8.39e-08,3;DOID:4045,8.39e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!5.49e-09!32 | |ontology_enrichment_uberon=UBERON:0002204!5.49e-09!32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.14e-07,3;UBERON:0001005,1.14e-07,3;UBERON:0007196,1.14e-07,3;UBERON:0001558,1.14e-07,3;UBERON:0002204,3.00e-07,32;UBERON:0002371,3.14e-07,16 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.258246646883153,0.281577444303333,0,0.34243593645101,0.239316476986009,0,0.0874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,0,0.297872853602656,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0,0,0.665191531965914,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.204169356262369,12.5559489221072,1.5626706890476,6.28228492768558,9.99993529652724,7.5135003345429,5.82612423637384,0.881277725829041,0.405507724878058,1.46837401729345,0,1.30815093828268,1.5378032791413,2.52758868796568,1.1198913730029,0,0.838913030288682,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,1.77858959222228,0.449949858640699,2.96659908770092,4.9733608046227,2.39680088414724,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0,5.2251073399897,3.85414956544606,0,0,0,0,0,0,0.140444420131752,0.852151612890289,1.29893002301434,0.35333957451034,0.422530259330042,0,0,0,3.24736561516821,5.57391704045217,4.04419556011827,0,0,0,0.173485326766136,0,0.461230994512117,1.20578112442098,0.587943535678524,0.125666591329675,0.494389935468748,0.144599356919912,0,0.970601099684455,0,0.969750506270444,0,0,0,0.255457055208591,5.27186547826049,0,5.59108999121485,0,0,0,0,0.255715457330331,0,0,0.305518091550949,0.248813941220186,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.272145996605311,0,0.281105173679186,0.517406741478031,0,0.189106080167819,0,0.219195732427575,1.11218899690239,1.0447564995665,1.4404749548556,0,2.80885274925294,1.28673953557358,1.70498099637356,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0,0,0.492502392237286,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.500535317148282,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,7.18841032636773,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0.472905432318573,2.87904096543407,0.478364305972461,0.655453258862952,0.518054945597687,0.578596234326046,3.01582567878545,1.08781136763742,0.491764273019036,0.275936746304732,0,0.117211686592203,0.819674726883377,0.504941854408746,0,0,0,0.477937595905104,0,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0.534196811001766,0.325773918707152,0.164970122972535,0,0,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0.16488625294148,1.45317984026315,0.72375509913787,1.19372344003136,0.820704498725306,0.582961673259701,0.18542530201051,1.19609616558497,0,1.11116716421827,0.941842285023455,1.50363650493128,0.915112692826091,3.0596117398894,3.77868921273877,5.94259887359022,0.954670618015114,0,0,0.324016022465404,0.418176592028937,0.87345025498471,0.539457385539283,0.495920734352016,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0.389762468933385,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.288635524920988,0,0.453460767230423,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0.643105137237198,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0.789209134313529,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,0.467863216890817,0.644613162144895,0.956441660344217,0.661774257358546,0.463735671240843 | |phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0.258246646883153,0.281577444303333,0,0.34243593645101,0.239316476986009,0,0.0874204024189974,0.333109761815663,0.607425802169478,0.699561878128147,0.315462165358238,0.274228867211478,0.42438965179803,0,0.297872853602656,0.261199789138935,0.47997726838022,0.22940928106717,0,0,0,0,0,0.665191531965914,0,0.61506478758457,0,0.577703239502549,0.166234645358492,0.204169356262369,12.5559489221072,1.5626706890476,6.28228492768558,9.99993529652724,7.5135003345429,5.82612423637384,0.881277725829041,0.405507724878058,1.46837401729345,0,1.30815093828268,1.5378032791413,2.52758868796568,1.1198913730029,0,0.838913030288682,0.725362142011344,0.672187598284928,0.257259436035947,0.286533439938757,0.515672092277442,0.202316460859598,0,0,0,1.77858959222228,0.449949858640699,2.96659908770092,4.9733608046227,2.39680088414724,0,0,0,0,0.285650984403804,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0.182975287204819,0,0,0,0.15279824777681,0,0.142371680799103,0,5.2251073399897,3.85414956544606,0,0,0,0,0,0,0.140444420131752,0.852151612890289,1.29893002301434,0.35333957451034,0.422530259330042,0,0,0,3.24736561516821,5.57391704045217,4.04419556011827,0,0,0,0.173485326766136,0,0.461230994512117,1.20578112442098,0.587943535678524,0.125666591329675,0.494389935468748,0.144599356919912,0,0.970601099684455,0,0.969750506270444,0,0,0,0.255457055208591,5.27186547826049,0,5.59108999121485,0,0,0,0,0.255715457330331,0,0,0.305518091550949,0.248813941220186,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.272145996605311,0,0.281105173679186,0.517406741478031,0,0.189106080167819,0,0.219195732427575,1.11218899690239,1.0447564995665,1.4404749548556,0,2.80885274925294,1.28673953557358,1.70498099637356,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0,0,0.268273401399619,0,0,0.492502392237286,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,0,0,0.330418782983798,0,0,0,0,0,0.444756087689741,0.190225626112559,0,0.164698954724011,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0.398282546508734,0,0,0,0,0,0.210407459670956,0.0632365371242573,0.147610147979602,0,0,0.296452627087149,0.500535317148282,0.196558995113203,0,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.486405680325106,0.274561413188081,7.18841032636773,0.372140947668503,0,0.252578877947112,0.179397413521912,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0,0.390267295715598,0.472905432318573,2.87904096543407,0.478364305972461,0.655453258862952,0.518054945597687,0.578596234326046,3.01582567878545,1.08781136763742,0.491764273019036,0.275936746304732,0,0.117211686592203,0.819674726883377,0.504941854408746,0,0,0,0.477937595905104,0,0,0.404810701674894,0.584511715822624,0.395287777946524,0,0,0.534196811001766,0.325773918707152,0.164970122972535,0,0,0,0.565815239267694,0,0.307435147943927,0.258428293168221,0,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0.21183207086382,0.220528398054962,0.16488625294148,1.45317984026315,0.72375509913787,1.19372344003136,0.820704498725306,0.582961673259701,0.18542530201051,1.19609616558497,0,1.11116716421827,0.941842285023455,1.50363650493128,0.915112692826091,3.0596117398894,3.77868921273877,5.94259887359022,0.954670618015114,0,0,0.324016022465404,0.418176592028937,0.87345025498471,0.539457385539283,0.495920734352016,0.26175594198403,0.259229946583586,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0.104859344425711,0,0,0,0.405450430580328,0.308132871494482,0.389762468933385,0,0,0.120195449519969,0,0.100966449948148,0,0.100826185136841,0.194915761479505,0.288635524920988,0,0.453460767230423,0,0,0.167884616364078,0.386379188064381,0.187682475451182,0.183151624267265,0.643105137237198,0,0,0,0.572895513439397,0,0,0.755393897389701,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.192075457214608,0.229741875822453,0.476293691283074,0.347652977834566,0.192909220463705,0.412085900803307,0.588795680537589,1.02860775715625,0.177475806159338,0.238436189947321,0.145346416632329,0.188218760830661,0.423073039458382,0.182927972872773,0.789209134313529,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.999242311751784,0.467863216890817,0.644613162144895,0.956441660344217,0.661774257358546,0.463735671240843 | ||
|short_description=p@chr2:102654028..102654039,- | |short_description=p@chr2:102654028..102654039,- | ||
}} | }} |
Revision as of 21:37, 14 November 2012
Short description: | p@chr2:102654028..102654039, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:102654028..102654039, - |
Coexpression cluster: | MCL_coexpression_mm9:1105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.01e-10 | 7 |
migratory neural crest cell | 1.51e-09 | 10 |
neuron associated cell | 1.51e-09 | 10 |
glial cell (sensu Vertebrata) | 1.51e-09 | 10 |
neuron associated cell (sensu Vertebrata) | 1.51e-09 | 10 |
glial cell | 1.51e-09 | 10 |
glioblast | 1.51e-09 | 10 |
glioblast (sensu Vertebrata) | 1.51e-09 | 10 |
motile cell | 1.30e-08 | 54 |
duct epithelial cell | 1.14e-07 | 3 |
epithelial cell of tracheobronchial tree | 1.14e-07 | 3 |
branched duct epithelial cell | 1.14e-07 | 3 |
epithelial cell of lower respiratory tract | 1.14e-07 | 3 |
respiratory epithelial cell | 1.14e-07 | 3 |
tracheal epithelial cell | 1.14e-07 | 3 |
tracheoblast | 1.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.14e-07 | 3 |
respiratory airway | 1.14e-07 | 3 |
tracheobronchial tree | 1.14e-07 | 3 |
lower respiratory tract | 1.14e-07 | 3 |
musculoskeletal system | 3.00e-07 | 32 |
bone marrow | 3.14e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 8.39e-08 | 3 |
muscle cancer | 8.39e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.