FFCP PHASE1:Hg19::chr1:207112651..207112664,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;1.33e-23;1!UBERON:0001045;3.67e-23;1!UBERON:0008801;3.67e-23;1!UBERON:0006242;3.67e-23;1!UBERON:0006595;7.76e-09;86 | |ontology_enrichment_development_v019=UBERON:0006298;1.33e-23;1!UBERON:0001045;3.67e-23;1!UBERON:0008801;3.67e-23;1!UBERON:0006242;3.67e-23;1!UBERON:0006595;7.76e-09;86 | ||
|ontology_enrichment_disease=DOID:178!7.85e-09!1;DOID:326!7.85e-09!1;DOID:3978!7.85e-09!1;DOID:3394!7.85e-09!1;DOID:5844!7.85e-09!1 | |ontology_enrichment_disease=DOID:178!7.85e-09!1;DOID:326!7.85e-09!1;DOID:3978!7.85e-09!1;DOID:3394!7.85e-09!1;DOID:5844!7.85e-09!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.87e-18!115;UBERON:0001829!5.32e-17!2;UBERON:0004921!5.58e-16!129;UBERON:0004185!5.58e-16!129;UBERON:0001007!1.72e-14!155;UBERON:0001555!1.72e-14!155;UBERON:0007026!1.72e-14!155;UBERON:0001155!2.37e-14!9;UBERON:0004119!5.21e-13!169;UBERON:0000925!5.21e-13!169;UBERON:0006595!5.21e-13!169;UBERON:0003408!1.14e-12!10;UBERON:0001044!1.70e-12!6;UBERON:0003293!1.70e-12!6;UBERON:0003294!1.70e-12!6;UBERON:0010047!1.70e-12!6;UBERON:0000167!1.70e-12!6;UBERON:0000059!8.98e-12!11;UBERON:0006562!4.04e-11!11;UBERON:0001723!5.16e-11!3;UBERON:0001033!5.16e-11!3;UBERON:0010056!5.16e-11!3;UBERON:0000078!1.17e-10!18;UBERON:0000160!1.02e-09!27;UBERON:0001736!1.74e-09!1;UBERON:0006298!1.74e-09!1;UBERON:0001154!2.82e-09!1;UBERON:0001153!2.82e-09!1;UBERON:0001831!3.05e-09!1;UBERON:0001567!3.05e-09!1;UBERON:0008801!3.05e-09!1;UBERON:0000166!4.16e-09!21;UBERON:0001301!8.49e-09!1;UBERON:0000481!8.43e-08!347;UBERON:0000077!1.13e-07!130;UBERON:0000161!1.89e-07!35;UBERON:0005409!1.94e-07!35;UBERON:0001004!2.70e-07!72;UBERON:0001042!2.86e-07!10;UBERON:0009145!2.86e-07!10;UBERON:0000165!8.89e-07!28;UBERON:0000930!8.89e-07!28 | |ontology_enrichment_uberon=UBERON:0007023!1.87e-18!115;UBERON:0001829!5.32e-17!2;UBERON:0004921!5.58e-16!129;UBERON:0004185!5.58e-16!129;UBERON:0001007!1.72e-14!155;UBERON:0001555!1.72e-14!155;UBERON:0007026!1.72e-14!155;UBERON:0001155!2.37e-14!9;UBERON:0004119!5.21e-13!169;UBERON:0000925!5.21e-13!169;UBERON:0006595!5.21e-13!169;UBERON:0003408!1.14e-12!10;UBERON:0001044!1.70e-12!6;UBERON:0003293!1.70e-12!6;UBERON:0003294!1.70e-12!6;UBERON:0010047!1.70e-12!6;UBERON:0000167!1.70e-12!6;UBERON:0000059!8.98e-12!11;UBERON:0006562!4.04e-11!11;UBERON:0001723!5.16e-11!3;UBERON:0001033!5.16e-11!3;UBERON:0010056!5.16e-11!3;UBERON:0000078!1.17e-10!18;UBERON:0000160!1.02e-09!27;UBERON:0001736!1.74e-09!1;UBERON:0006298!1.74e-09!1;UBERON:0001154!2.82e-09!1;UBERON:0001153!2.82e-09!1;UBERON:0001831!3.05e-09!1;UBERON:0001567!3.05e-09!1;UBERON:0008801!3.05e-09!1;UBERON:0000166!4.16e-09!21;UBERON:0001301!8.49e-09!1;UBERON:0000481!8.43e-08!347;UBERON:0000077!1.13e-07!130;UBERON:0000161!1.89e-07!35;UBERON:0005409!1.94e-07!35;UBERON:0001004!2.70e-07!72;UBERON:0001042!2.86e-07!10;UBERON:0009145!2.86e-07!10;UBERON:0000165!8.89e-07!28;UBERON:0000930!8.89e-07!28 | ||
|ontology_enrichment_uberon_v019=UBERON:0001829;6.99e-45;2!UBERON:0001736;1.33e-23;1!UBERON:0001154;3.67e-23;1!UBERON:0001831;3.67e-23;1!UBERON:0001153;3.67e-23;1!UBERON:0009854;3.67e-23;1!UBERON:0001567;3.67e-23;1!UBERON:0001155;1.26e-22;9!UBERON:0004921;4.27e-21;33!UBERON:0000160;4.97e-20;17!UBERON:0000059;1.17e-18;11!UBERON:0005409;8.77e-16;22!UBERON:0001044;1.01e-15;6!UBERON:0003293;1.01e-15;6!UBERON:0003294;1.01e-15;6!UBERON:0010047;1.01e-15;6!UBERON:0003408;1.01e-15;6!UBERON:0000167;1.01e-15;6!UBERON:0003127;2.74e-12;2!UBERON:0004089;2.74e-12;2!UBERON:0001555;2.13e-10;54!UBERON:0001007;7.90e-09;81!UBERON:0002110;1.26e-08;3!UBERON:0001041;2.81e-07;14!UBERON:0009856;8.85e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0001829;6.99e-45;2!UBERON:0001736;1.33e-23;1!UBERON:0001154;3.67e-23;1!UBERON:0001831;3.67e-23;1!UBERON:0001153;3.67e-23;1!UBERON:0009854;3.67e-23;1!UBERON:0001567;3.67e-23;1!UBERON:0001155;1.26e-22;9!UBERON:0004921;4.27e-21;33!UBERON:0000160;4.97e-20;17!UBERON:0000059;1.17e-18;11!UBERON:0005409;8.77e-16;22!UBERON:0001044;1.01e-15;6!UBERON:0003293;1.01e-15;6!UBERON:0003294;1.01e-15;6!UBERON:0010047;1.01e-15;6!UBERON:0003408;1.01e-15;6!UBERON:0000167;1.01e-15;6!UBERON:0003127;2.74e-12;2!UBERON:0004089;2.74e-12;2!UBERON:0001555;2.13e-10;54!UBERON:0001007;7.90e-09;81!UBERON:0002110;1.26e-08;3!UBERON:0001041;2.81e-07;14!UBERON:0009856;8.85e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,1.22e-44,2;UBERON:0001736,1.34e-23,1;UBERON:0006298,1.34e-23,1;UBERON:0001154,5.13e-23,1;UBERON:0001153,5.13e-23,1;UBERON:0001045,5.13e-23,1;UBERON:0001831,6.40e-23,1;UBERON:0001567,6.40e-23,1;UBERON:0008801,6.40e-23,1;UBERON:0001155,1.26e-22,9;UBERON:0000160,4.97e-20,17;UBERON:0000059,1.17e-18,11;UBERON:0001044,1.22e-15,6;UBERON:0003293,1.22e-15,6;UBERON:0003294,1.22e-15,6;UBERON:0010047,1.22e-15,6;UBERON:0000167,1.22e-15,6;UBERON:0005409,5.15e-14,25;UBERON:0003127,2.59e-12,2;UBERON:0007023,3.46e-12,114;UBERON:0004089,3.62e-12,2;UBERON:0003408,8.84e-10,10;UBERON:0001007,1.85e-09,145;UBERON:0001555,1.85e-09,145;UBERON:0007026,1.85e-09,145;UBERON:0004921,5.99e-09,118;UBERON:0002110,1.04e-08,3;UBERON:0006242,1.04e-08,3;UBERON:0004119,1.50e-08,160;UBERON:0000925,1.50e-08,160;UBERON:0006595,1.50e-08,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.76915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17066859323229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66983426723633,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0,1.36272190246085,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10513566212459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.76915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,1.92107695265417,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472834243795189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533937062838473,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.17066859323229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.66983426723633,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0,0,0.217716747896961,0.342233301085281,0,1.36272190246085,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@PIGR | |short_description=p14@PIGR | ||
}} | }} |
Revision as of 07:39, 16 November 2012
Short description: | p14@PIGR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_14_at_PIGR_5end |
Coexpression cluster: | C435_submaxillary_salivary_parotid_small_colon_gall_trachea |
Association with transcript: | -13bp_to_M24559_5end |
EntrezGene: | PIGR |
HGNC: | 8968 |
UniProt: | P01833 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 1.22e-44 | 2 |
submandibular gland | 1.34e-23 | 1 |
submandibular gland primordium | 1.34e-23 | 1 |
vermiform appendix | 5.13e-23 | 1 |
caecum | 5.13e-23 | 1 |
midgut | 5.13e-23 | 1 |
parotid gland | 6.40e-23 | 1 |
cheek | 6.40e-23 | 1 |
parotid gland primordium | 6.40e-23 | 1 |
colon | 1.26e-22 | 9 |
intestine | 4.97e-20 | 17 |
large intestine | 1.17e-18 | 11 |
saliva-secreting gland | 1.22e-15 | 6 |
gland of oral region | 1.22e-15 | 6 |
gland of foregut | 1.22e-15 | 6 |
oral gland | 1.22e-15 | 6 |
oral cavity | 1.22e-15 | 6 |
gastrointestinal system | 5.15e-14 | 25 |
open tracheal system trachea | 2.59e-12 | 2 |
adult organism | 3.46e-12 | 114 |
midface | 3.62e-12 | 2 |
gland of gut | 8.84e-10 | 10 |
digestive system | 1.85e-09 | 145 |
digestive tract | 1.85e-09 | 145 |
primitive gut | 1.85e-09 | 145 |
subdivision of digestive tract | 5.99e-09 | 118 |
gallbladder | 1.04e-08 | 3 |
gall bladder primordium | 1.04e-08 | 3 |
endoderm-derived structure | 1.50e-08 | 160 |
endoderm | 1.50e-08 | 160 |
presumptive endoderm | 1.50e-08 | 160 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.