FFCP PHASE1:Hg19::chr5:35047976..35047990,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000181!3.87e-09!12;CL:0000417!3.87e-09!12;CL:0000668!3.87e-09!12;CL:0000414!3.87e-09!12;CL:0000412!3.87e-09!12;CL:0000182!3.87e-09!12 | |ontology_enrichment_celltype=CL:0000181!3.87e-09!12;CL:0000417!3.87e-09!12;CL:0000668!3.87e-09!12;CL:0000414!3.87e-09!12;CL:0000412!3.87e-09!12;CL:0000182!3.87e-09!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.11e-15;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.11e-15;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.06e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0003104;6.27e-11;31!UBERON:0003918;6.04e-09;10!UBERON:0007687;6.04e-09;10!UBERON:0004161;4.18e-08;11!UBERON:0009497;5.42e-07;13 | |ontology_enrichment_development_v019=UBERON:0003104;6.27e-11;31!UBERON:0003918;6.04e-09;10!UBERON:0007687;6.04e-09;10!UBERON:0004161;4.18e-08;11!UBERON:0009497;5.42e-07;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p2@AGXT2 | |short_description=p2@AGXT2 | ||
}} | }} |
Revision as of 00:50, 17 November 2012
Short description: | p2@AGXT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AGXT2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 4bp_to_ENST00000505542_5end |
EntrezGene: | AGXT2 |
HGNC: | 14412 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.06e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.36e-26 | 19 |
digestive gland | 3.36e-26 | 19 |
liver bud | 3.36e-26 | 19 |
hepatic diverticulum | 1.15e-22 | 22 |
liver primordium | 1.15e-22 | 22 |
digestive tract diverticulum | 1.08e-21 | 23 |
epithelial sac | 5.61e-20 | 25 |
epithelium of foregut-midgut junction | 5.61e-20 | 25 |
anatomical boundary | 5.61e-20 | 25 |
hepatobiliary system | 5.61e-20 | 25 |
foregut-midgut junction | 5.61e-20 | 25 |
septum transversum | 5.61e-20 | 25 |
sac | 3.22e-19 | 26 |
abdomen element | 8.53e-18 | 54 |
abdominal segment element | 8.53e-18 | 54 |
exocrine gland | 3.74e-16 | 31 |
exocrine system | 3.74e-16 | 31 |
abdominal segment of trunk | 5.33e-16 | 60 |
abdomen | 5.33e-16 | 60 |
endocrine gland | 2.50e-14 | 35 |
endocrine system | 3.55e-11 | 45 |
trunk region element | 2.08e-09 | 101 |
gut epithelium | 2.49e-09 | 54 |
gland | 1.51e-08 | 59 |
subdivision of trunk | 1.87e-08 | 112 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.