FFCP PHASE1:Hg19::chr3:32995025..32995046,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000080!5.05e-20!6;CL:0000084!8.19e-20!25;CL:0000827!8.19e-20!25;CL:0000791!5.97e-17!18;CL:0000789!5.97e-17!18;CL:0002420!5.97e-17!18;CL:0002419!5.97e-17!18;CL:0000790!5.97e-17!18;CL:0000842!2.02e-10!3;CL:0000625!3.10e-10!11;CL:0000624!9.37e-10!6;CL:0000838!2.41e-09!52;CL:0000542!4.14e-09!53;CL:0000051!4.14e-09!53;CL:0000224!6.40e-08!4;CL:0000738!9.17e-07!140 | |ontology_enrichment_celltype=CL:0000080!5.05e-20!6;CL:0000084!8.19e-20!25;CL:0000827!8.19e-20!25;CL:0000791!5.97e-17!18;CL:0000789!5.97e-17!18;CL:0002420!5.97e-17!18;CL:0002419!5.97e-17!18;CL:0000790!5.97e-17!18;CL:0000842!2.02e-10!3;CL:0000625!3.10e-10!11;CL:0000624!9.37e-10!6;CL:0000838!2.41e-09!52;CL:0000542!4.14e-09!53;CL:0000051!4.14e-09!53;CL:0000224!6.40e-08!4;CL:0000738!9.17e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000624;2.08e-15;6!CL:0000898;3.06e-14;3!CL:0000895;4.44e-11;1 | |ontology_enrichment_celltype_v019=CL:0000624;2.08e-15;6!CL:0000898;3.06e-14;3!CL:0000895;4.44e-11;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.93e-15,6;CL:0000898,3.39e-14,3;CL:0000810,5.43e-11,1;CL:0000895,5.43e-11,1;CL:0002436,5.43e-11,1;CL:0002427,5.43e-11,1;CL:0002428,5.43e-11,1;CL:0002429,5.43e-11,1;CL:0002433,5.43e-11,1;CL:0002431,5.43e-11,1;CL:0002432,5.43e-11,1 | |||
|ontology_enrichment_development_v019=CL:0002427;4.44e-11;1 | |ontology_enrichment_development_v019=CL:0002427;4.44e-11;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;2.54e-11;1!DOID:0060061;2.54e-11;1!DOID:8691;2.54e-11;1 | |ontology_enrichment_disease_v019=DOID:0060060;2.54e-11;1!DOID:0060061;2.54e-11;1!DOID:8691;2.54e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,2.96e-11,1;DOID:0060061,2.96e-11,1;DOID:8691,2.96e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.64e-13!15;UBERON:0000179!2.64e-13!15;UBERON:0000463!2.64e-13!15;UBERON:0002370!1.44e-08!4;UBERON:0005058!1.44e-08!4;UBERON:0009113!1.44e-08!4;UBERON:0003295!1.44e-08!4;UBERON:0005562!1.44e-08!4;UBERON:0004177!3.68e-08!7 | |ontology_enrichment_uberon=UBERON:0000178!2.64e-13!15;UBERON:0000179!2.64e-13!15;UBERON:0000463!2.64e-13!15;UBERON:0002370!1.44e-08!4;UBERON:0005058!1.44e-08!4;UBERON:0009113!1.44e-08!4;UBERON:0003295!1.44e-08!4;UBERON:0005562!1.44e-08!4;UBERON:0004177!3.68e-08!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;4.44e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0000029;4.44e-11;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,4.44e-11,1;UBERON:0002370,8.96e-11,4;UBERON:0005058,8.96e-11,4;UBERON:0009113,8.96e-11,4;UBERON:0003295,8.96e-11,4;UBERON:0005562,8.96e-11,4;UBERON:0003351,1.80e-07,6 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96505381374582,0.616804496998528,8.3593247695339,0,0,0,7.68732152507698,4.41908861212256,3.54454231333794,4.33286182024025,9.86303161887699,7.1532641157933,1.47994114143309,1.93445012450094,1.73881851441031,0,0,0,3.51258962362455,1.14966148080576,0.34362744548263,2.27717722817553,0.318565414324097,0,0,0.752875595388864,0.383959833463255,0,0.236777252044017,0,0,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.647142602455851,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0.593042257361244,5.93106906943214,1.14864144456001,0,0,0,0,0,0,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0.157204305099666,0.828478110694391,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0,0,0,0,2.19986135440423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0,0,0,2.38978966393223,0.620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p1@AB464482,p1@CU687156 | |short_description=p1@AB464482,p1@CU687156 | ||
}} | }} |
Revision as of 01:45, 17 November 2012
Short description: | p1@AB464482, p1@CU687156 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_AB464482_5end, CAGE_peak_1_at_CU687156_5end |
Coexpression cluster: | C144_CD4_tonsil_NK_appendix_CD8_splenic_mycosis |
Association with transcript: | 110bp_to_AB464482, CU687156_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.93e-15 | 6 |
naive T cell | 3.39e-14 | 3 |
CD4-positive, alpha-beta thymocyte | 5.43e-11 | 1 |
naive thymus-derived CD4-positive, alpha-beta T cell | 5.43e-11 | 1 |
mature CD4 single-positive thymocyte | 5.43e-11 | 1 |
resting double-positive thymocyte | 5.43e-11 | 1 |
double-positive blast | 5.43e-11 | 1 |
CD69-positive double-positive thymocyte | 5.43e-11 | 1 |
CD69-positive, CD4-positive single-positive thymocyte | 5.43e-11 | 1 |
CD4-positive, CD8-intermediate double-positive thymocyte | 5.43e-11 | 1 |
CD24-positive, CD4 single-positive thymocyte | 5.43e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
lymph node | 4.44e-11 | 1 |
thymus | 8.96e-11 | 4 |
hemolymphoid system gland | 8.96e-11 | 4 |
thymic region | 8.96e-11 | 4 |
pharyngeal gland | 8.96e-11 | 4 |
thymus primordium | 8.96e-11 | 4 |
pharyngeal epithelium | 1.80e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 2.96e-11 | 1 |
cutaneous T cell lymphoma | 2.96e-11 | 1 |
mycosis fungoides | 2.96e-11 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.