FFCP PHASE1:Hg19::chr1:206290391..206290402,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000738!5.67e-21!140;CL:0000945!5.75e-20!24;CL:0000826!5.75e-20!24;CL:0002031!5.61e-18!124;CL:0002032!4.26e-17!165;CL:0000837!4.26e-17!165;CL:0002087!6.74e-17!119;CL:0000988!1.25e-16!182;CL:0000037!3.26e-16!172;CL:0000566!3.26e-16!172;CL:0000838!1.25e-12!52;CL:0000542!2.36e-12!53;CL:0000051!2.36e-12!53;CL:0000453!9.49e-12!5;CL:0000236!1.47e-11!14;CL:0002057!9.76e-11!42;CL:0000860!6.34e-10!45;CL:0000623!4.01e-09!3;CL:0000825!4.01e-09!3;CL:0000946!7.26e-08!1;CL:0000786!7.26e-08!1;CL:0000980!7.26e-08!1;CL:0002009!7.42e-08!65;CL:0000557!4.63e-07!71;CL:0000763!7.06e-07!112;CL:0000049!7.06e-07!112;CL:0000990!9.84e-07!8 | |ontology_enrichment_celltype=CL:0000738!5.67e-21!140;CL:0000945!5.75e-20!24;CL:0000826!5.75e-20!24;CL:0002031!5.61e-18!124;CL:0002032!4.26e-17!165;CL:0000837!4.26e-17!165;CL:0002087!6.74e-17!119;CL:0000988!1.25e-16!182;CL:0000037!3.26e-16!172;CL:0000566!3.26e-16!172;CL:0000838!1.25e-12!52;CL:0000542!2.36e-12!53;CL:0000051!2.36e-12!53;CL:0000453!9.49e-12!5;CL:0000236!1.47e-11!14;CL:0002057!9.76e-11!42;CL:0000860!6.34e-10!45;CL:0000623!4.01e-09!3;CL:0000825!4.01e-09!3;CL:0000946!7.26e-08!1;CL:0000786!7.26e-08!1;CL:0000980!7.26e-08!1;CL:0002009!7.42e-08!65;CL:0000557!4.63e-07!71;CL:0000763!7.06e-07!112;CL:0000049!7.06e-07!112;CL:0000990!9.84e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000236;3.31e-16;13!CL:0000945;2.78e-09;24 | |ontology_enrichment_celltype_v019=CL:0000236;3.31e-16;13!CL:0000945;2.78e-09;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.93e-15,14;CL:0000945,2.78e-09,24;CL:0000826,2.78e-09,24 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.03e-08;7 | |ontology_enrichment_development_v019=UBERON:0004872;2.03e-08;7 | ||
|ontology_enrichment_disease=DOID:0060058!4.81e-10!10 | |ontology_enrichment_disease=DOID:0060058!4.81e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:4468;4.32e-26;2 | |ontology_enrichment_disease_v019=DOID:4468;4.32e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0002106!2.23e-09!3;UBERON:0004854!2.23e-09!3;UBERON:0009034!2.23e-09!3;UBERON:0002095!2.23e-09!3;UBERON:0004782!2.23e-09!3;UBERON:0003281!2.23e-09!3;UBERON:0009664!2.23e-09!3;UBERON:0002296!2.23e-09!3;UBERON:0005602!2.23e-09!3;UBERON:0001179!2.23e-09!3;UBERON:0006293!2.23e-09!3;UBERON:0002390!7.98e-08!102;UBERON:0003061!7.98e-08!102;UBERON:0002193!6.44e-07!112 | |ontology_enrichment_uberon=UBERON:0002106!2.23e-09!3;UBERON:0004854!2.23e-09!3;UBERON:0009034!2.23e-09!3;UBERON:0002095!2.23e-09!3;UBERON:0004782!2.23e-09!3;UBERON:0003281!2.23e-09!3;UBERON:0009664!2.23e-09!3;UBERON:0002296!2.23e-09!3;UBERON:0005602!2.23e-09!3;UBERON:0001179!2.23e-09!3;UBERON:0006293!2.23e-09!3;UBERON:0002390!7.98e-08!102;UBERON:0003061!7.98e-08!102;UBERON:0002193!6.44e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;8.00e-18;3!UBERON:0004177;2.94e-11;5!UBERON:0005057;2.94e-11;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;8.00e-18;3!UBERON:0004177;2.94e-11;5!UBERON:0005057;2.94e-11;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.00e-18,3;UBERON:0004854,8.00e-18,3;UBERON:0009034,8.00e-18,3;UBERON:0002095,8.00e-18,3;UBERON:0004782,8.00e-18,3;UBERON:0003281,8.00e-18,3;UBERON:0009664,8.00e-18,3;UBERON:0002296,8.00e-18,3;UBERON:0005602,8.00e-18,3;UBERON:0001179,8.00e-18,3;UBERON:0006293,8.00e-18,3;UBERON:0004177,2.03e-08,7;UBERON:0005057,2.03e-08,7;UBERON:0000945,1.59e-07,8;UBERON:0010039,1.59e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0.689491361473237,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.800791974072025,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69254513452506,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,4.19752854884702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0.0774672005803016,0.142169232487422,0,0,0,0.434021741431704,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0,0,0,0.689491361473237,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0,0,0.800791974072025,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.69254513452506,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,4.19752854884702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:206290391..206290402,- | |short_description=p@chr1:206290391..206290402,- | ||
}} | }} |
Revision as of 17:44, 17 November 2012
Short description: | p@chr1:206290391..206290402, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:206290391..206290402, - |
Coexpression cluster: | C224_clear_serous_pleomorphic_choriocarcinoma_mesothelioma_amniotic_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.93e-15 | 14 |
lymphocyte of B lineage | 2.78e-09 | 24 |
pro-B cell | 2.78e-09 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.00e-18 | 3 |
gastrointestinal system mesentery | 8.00e-18 | 3 |
stomach region | 8.00e-18 | 3 |
mesentery | 8.00e-18 | 3 |
gastrointestinal system serosa | 8.00e-18 | 3 |
mesentery of stomach | 8.00e-18 | 3 |
gut mesentery | 8.00e-18 | 3 |
dorsal mesentery | 8.00e-18 | 3 |
dorsal mesogastrium | 8.00e-18 | 3 |
peritoneal cavity | 8.00e-18 | 3 |
spleen primordium | 8.00e-18 | 3 |
hemopoietic organ | 2.03e-08 | 7 |
immune organ | 2.03e-08 | 7 |
stomach | 1.59e-07 | 8 |
food storage organ | 1.59e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 4.32e-26 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.