FFCP PHASE1:Hg19::chr10:113987378..113987454,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000136!5.29e-18!15;CL:0000181!1.93e-08!12;CL:0000417!1.93e-08!12;CL:0000668!1.93e-08!12;CL:0000414!1.93e-08!12;CL:0000412!1.93e-08!12;CL:0000182!1.93e-08!12;CL:0002334!1.98e-07!12 | |ontology_enrichment_celltype=CL:0000136!5.29e-18!15;CL:0000181!1.93e-08!12;CL:0000417!1.93e-08!12;CL:0000668!1.93e-08!12;CL:0000414!1.93e-08!12;CL:0000412!1.93e-08!12;CL:0000182!1.93e-08!12;CL:0002334!1.98e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;3.24e-28;13!CL:0000182;3.56e-14;12!CL:0002580;6.26e-09;3!CL:0002521;1.24e-08;3!CL:0002615;1.32e-08;3!CL:0002623;1.72e-08;3!CL:0002334;1.97e-07;12 | |ontology_enrichment_celltype_v019=CL:0000136;3.24e-28;13!CL:0000182;3.56e-14;12!CL:0002580;6.26e-09;3!CL:0002521;1.24e-08;3!CL:0002615;1.32e-08;3!CL:0002623;1.72e-08;3!CL:0002334;1.97e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.20e-24,15;CL:0000182,4.26e-14,12;CL:0002580,6.80e-09,3;CL:0002521,1.09e-08,3;CL:0002615,1.35e-08,3;CL:0002623,1.98e-08,3;CL:0002334,1.94e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.16e-15;11!UBERON:0009497;1.85e-12;13!UBERON:0003104;5.77e-08;31 | |ontology_enrichment_development_v019=UBERON:0004161;5.16e-15;11!UBERON:0009497;1.85e-12;13!UBERON:0003104;5.77e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;1.56e-07;14 | |ontology_enrichment_disease_v019=DOID:2394;1.56e-07;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,2.31e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0001013!2.11e-10!14;UBERON:0002365!8.83e-10!31;UBERON:0002330!8.83e-10!31;UBERON:0009854!1.79e-08!23;UBERON:0002107!2.00e-08!19;UBERON:0006925!2.00e-08!19;UBERON:0008836!2.00e-08!19;UBERON:0009497!2.98e-08!25;UBERON:0000015!2.98e-08!25;UBERON:0002423!2.98e-08!25;UBERON:0006235!2.98e-08!25;UBERON:0004161!2.98e-08!25;UBERON:0000475!3.37e-08!365;UBERON:0003688!4.50e-08!6;UBERON:0002358!4.50e-08!6;UBERON:0003684!4.50e-08!6;UBERON:0001178!4.50e-08!6;UBERON:0009856!5.23e-08!26;UBERON:0008835!9.01e-08!22;UBERON:0003894!9.01e-08!22;UBERON:0007499!2.41e-07!25 | |ontology_enrichment_uberon=UBERON:0001013!2.11e-10!14;UBERON:0002365!8.83e-10!31;UBERON:0002330!8.83e-10!31;UBERON:0009854!1.79e-08!23;UBERON:0002107!2.00e-08!19;UBERON:0006925!2.00e-08!19;UBERON:0008836!2.00e-08!19;UBERON:0009497!2.98e-08!25;UBERON:0000015!2.98e-08!25;UBERON:0002423!2.98e-08!25;UBERON:0006235!2.98e-08!25;UBERON:0004161!2.98e-08!25;UBERON:0000475!3.37e-08!365;UBERON:0003688!4.50e-08!6;UBERON:0002358!4.50e-08!6;UBERON:0003684!4.50e-08!6;UBERON:0001178!4.50e-08!6;UBERON:0009856!5.23e-08!26;UBERON:0008835!9.01e-08!22;UBERON:0003894!9.01e-08!22;UBERON:0007499!2.41e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;9.14e-16;19!UBERON:0006925;9.14e-16;19!UBERON:0002365;1.08e-15;31!UBERON:0002330;1.08e-15;31!UBERON:0002423;2.44e-11;25!UBERON:0003688;4.55e-11;6!UBERON:0002358;4.55e-11;6!UBERON:0003684;4.55e-11;6!UBERON:0001178;4.55e-11;6!UBERON:0000310;1.63e-09;10!UBERON:0002190;1.24e-08;3!UBERON:0001443;1.43e-08;11!UBERON:0002368;2.58e-07;33!UBERON:0004457;3.09e-07;9!UBERON:0000042;3.09e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002107;9.14e-16;19!UBERON:0006925;9.14e-16;19!UBERON:0002365;1.08e-15;31!UBERON:0002330;1.08e-15;31!UBERON:0002423;2.44e-11;25!UBERON:0003688;4.55e-11;6!UBERON:0002358;4.55e-11;6!UBERON:0003684;4.55e-11;6!UBERON:0001178;4.55e-11;6!UBERON:0000310;1.63e-09;10!UBERON:0002190;1.24e-08;3!UBERON:0001443;1.43e-08;11!UBERON:0002368;2.58e-07;33!UBERON:0004457;3.09e-07;9!UBERON:0000042;3.09e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,2.43e-16,31;UBERON:0002330,2.43e-16,31;UBERON:0002107,1.05e-15,19;UBERON:0006925,1.05e-15,19;UBERON:0008836,1.05e-15,19;UBERON:0008835,3.38e-13,22;UBERON:0003894,3.38e-13,22;UBERON:0009854,1.65e-12,23;UBERON:0007499,2.69e-11,25;UBERON:0009497,2.69e-11,25;UBERON:0000015,2.69e-11,25;UBERON:0002423,2.69e-11,25;UBERON:0006235,2.69e-11,25;UBERON:0004161,2.69e-11,25;UBERON:0003688,4.57e-11,6;UBERON:0002358,4.57e-11,6;UBERON:0003684,4.57e-11,6;UBERON:0001178,4.57e-11,6;UBERON:0009856,9.22e-11,26;UBERON:0000310,1.64e-09,10;UBERON:0002417,7.79e-09,60;UBERON:0000916,7.79e-09,60;UBERON:0002190,1.09e-08,3;UBERON:0001443,1.43e-08,11;UBERON:0009569,2.14e-08,112;UBERON:0002530,8.33e-08,59;UBERON:0002368,2.38e-07,35 | |||
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| ||
|short_description=p@chr10:113987378..113987454,- | |short_description=p@chr10:113987378..113987454,- | ||
}} | }} |
Revision as of 15:42, 19 November 2012
Short description: | p@chr10:113987378..113987454, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:113987378..113987454, - |
Coexpression cluster: | C576_Hepatocyte_hepatocellular_liver_Intestinal_mature_breast_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.20e-24 | 15 |
hepatocyte | 4.26e-14 | 12 |
preadipocyte of the breast | 6.80e-09 | 3 |
subcutaneous fat cell | 1.09e-08 | 3 |
adipocyte of omentum tissue | 1.35e-08 | 3 |
acinar cell of salivary gland | 1.98e-08 | 3 |
preadipocyte | 1.94e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
exocrine gland | 2.43e-16 | 31 |
exocrine system | 2.43e-16 | 31 |
liver | 1.05e-15 | 19 |
digestive gland | 1.05e-15 | 19 |
liver bud | 1.05e-15 | 19 |
hepatic diverticulum | 3.38e-13 | 22 |
liver primordium | 3.38e-13 | 22 |
digestive tract diverticulum | 1.65e-12 | 23 |
epithelial sac | 2.69e-11 | 25 |
epithelium of foregut-midgut junction | 2.69e-11 | 25 |
anatomical boundary | 2.69e-11 | 25 |
hepatobiliary system | 2.69e-11 | 25 |
foregut-midgut junction | 2.69e-11 | 25 |
septum transversum | 2.69e-11 | 25 |
omentum | 4.57e-11 | 6 |
peritoneum | 4.57e-11 | 6 |
abdominal cavity | 4.57e-11 | 6 |
visceral peritoneum | 4.57e-11 | 6 |
sac | 9.22e-11 | 26 |
breast | 1.64e-09 | 10 |
abdominal segment of trunk | 7.79e-09 | 60 |
abdomen | 7.79e-09 | 60 |
subcutaneous adipose tissue | 1.09e-08 | 3 |
chest | 1.43e-08 | 11 |
subdivision of trunk | 2.14e-08 | 112 |
gland | 8.33e-08 | 59 |
endocrine gland | 2.38e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.31e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.