FFCP PHASE1:Hg19::chr6:11291949..11291963,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000080!1.19e-14!6;CL:0000946!1.61e-10!1;CL:0000786!1.61e-10!1;CL:0000980!1.61e-10!1 | |ontology_enrichment_celltype=CL:0000080!1.19e-14!6;CL:0000946!1.61e-10!1;CL:0000786!1.61e-10!1;CL:0000980!1.61e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.30e-07;24 | |ontology_enrichment_celltype_v019=CL:0000945;2.30e-07;24 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.20e-07,24;CL:0000826,2.20e-07,24 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:0060060!2.79e-11!1;DOID:0060061!2.79e-11!1;DOID:8691!2.79e-11!1;DOID:0060058!3.13e-09!10 | |ontology_enrichment_disease=DOID:0060060!2.79e-11!1;DOID:0060061!2.79e-11!1;DOID:8691!2.79e-11!1;DOID:0060058!3.13e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.18e-19;1!DOID:0060061;1.18e-19;1!DOID:8691;1.18e-19;1!DOID:0060058;3.69e-08;10 | |ontology_enrichment_disease_v019=DOID:0060060;1.18e-19;1!DOID:0060061;1.18e-19;1!DOID:8691;1.18e-19;1!DOID:0060058;3.69e-08;10 | ||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.08e-19,1;DOID:0060061,1.08e-19,1;DOID:8691,1.08e-19,1;DOID:0060058,3.63e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0002171!3.08e-11!1;UBERON:0006518!3.08e-11!1;UBERON:0008949!3.08e-11!1;UBERON:0000101!3.08e-11!1;UBERON:0002167!3.08e-11!1;UBERON:0002372!1.46e-10!1;UBERON:0001961!1.46e-10!1;UBERON:0001744!1.46e-10!1;UBERON:0001735!1.46e-10!1;UBERON:0002363!1.77e-10!1;UBERON:0007647!1.77e-10!1;UBERON:0010115!1.77e-10!1;UBERON:0002331!5.18e-09!10;UBERON:0000358!5.18e-09!10;UBERON:0000307!5.18e-09!10;UBERON:0000091!5.18e-09!10;UBERON:0000087!5.18e-09!10;UBERON:0007806!5.18e-09!10;UBERON:0008780!5.18e-09!10;UBERON:0005728!5.18e-09!10 | |ontology_enrichment_uberon=UBERON:0002171!3.08e-11!1;UBERON:0006518!3.08e-11!1;UBERON:0008949!3.08e-11!1;UBERON:0000101!3.08e-11!1;UBERON:0002167!3.08e-11!1;UBERON:0002372!1.46e-10!1;UBERON:0001961!1.46e-10!1;UBERON:0001744!1.46e-10!1;UBERON:0001735!1.46e-10!1;UBERON:0002363!1.77e-10!1;UBERON:0007647!1.77e-10!1;UBERON:0010115!1.77e-10!1;UBERON:0002331!5.18e-09!10;UBERON:0000358!5.18e-09!10;UBERON:0000307!5.18e-09!10;UBERON:0000091!5.18e-09!10;UBERON:0000087!5.18e-09!10;UBERON:0007806!5.18e-09!10;UBERON:0008780!5.18e-09!10;UBERON:0005728!5.18e-09!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.18e-19;1!UBERON:0006518;1.18e-19;1!UBERON:0008949;1.18e-19;1!UBERON:0000101;1.18e-19;1!UBERON:0002167;1.18e-19;1!UBERON:0002048;4.39e-08;22!UBERON:0000117;4.39e-08;22!UBERON:0000171;4.39e-08;22!UBERON:0000170;4.39e-08;22!UBERON:0002106;3.35e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0002171;1.18e-19;1!UBERON:0006518;1.18e-19;1!UBERON:0008949;1.18e-19;1!UBERON:0000101;1.18e-19;1!UBERON:0002167;1.18e-19;1!UBERON:0002048;4.39e-08;22!UBERON:0000117;4.39e-08;22!UBERON:0000171;4.39e-08;22!UBERON:0000170;4.39e-08;22!UBERON:0002106;3.35e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.30e-19,1;UBERON:0006518,1.30e-19,1;UBERON:0008949,1.30e-19,1;UBERON:0000101,1.30e-19,1;UBERON:0002167,1.30e-19,1;UBERON:0002048,4.55e-08,22;UBERON:0000117,4.55e-08,22;UBERON:0000171,4.55e-08,22;UBERON:0000170,4.55e-08,22;UBERON:0005597,4.55e-08,22;UBERON:0000118,4.55e-08,22;UBERON:0002106,3.35e-07,3;UBERON:0004854,3.35e-07,3;UBERON:0009034,3.35e-07,3;UBERON:0002095,3.35e-07,3;UBERON:0004782,3.35e-07,3;UBERON:0003281,3.35e-07,3;UBERON:0009664,3.35e-07,3;UBERON:0002296,3.35e-07,3;UBERON:0005602,3.35e-07,3;UBERON:0001179,3.35e-07,3;UBERON:0006293,3.35e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,3.69452652524756,4.48651453487972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0.626531697032732,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9502377594773,3.45849471219265,7.04206394090232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19954625077748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79894080664872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.74425688164961,3.69452652524756,4.48651453487972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.61958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12164046590889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0.626531697032732,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9502377594773,3.45849471219265,7.04206394090232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.19954625077748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79894080664872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:11291949..11291963,+ | |short_description=p@chr6:11291949..11291963,+ | ||
}} | }} |
Revision as of 00:10, 21 November 2012
Short description: | p@chr6:11291949..11291963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:11291949..11291963, + |
Coexpression cluster: | C308_lung_Hepatocyte_liver_thyroid_heart_left_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.20e-07 | 24 |
pro-B cell | 2.20e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.30e-19 | 1 |
right lung lobe | 1.30e-19 | 1 |
lower lobe of lung | 1.30e-19 | 1 |
lobe of lung | 1.30e-19 | 1 |
right lung | 1.30e-19 | 1 |
lung | 4.55e-08 | 22 |
respiratory tube | 4.55e-08 | 22 |
respiration organ | 4.55e-08 | 22 |
pair of lungs | 4.55e-08 | 22 |
lung primordium | 4.55e-08 | 22 |
lung bud | 4.55e-08 | 22 |
spleen | 3.35e-07 | 3 |
gastrointestinal system mesentery | 3.35e-07 | 3 |
stomach region | 3.35e-07 | 3 |
mesentery | 3.35e-07 | 3 |
gastrointestinal system serosa | 3.35e-07 | 3 |
mesentery of stomach | 3.35e-07 | 3 |
gut mesentery | 3.35e-07 | 3 |
dorsal mesentery | 3.35e-07 | 3 |
dorsal mesogastrium | 3.35e-07 | 3 |
peritoneal cavity | 3.35e-07 | 3 |
spleen primordium | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.08e-19 | 1 |
cutaneous T cell lymphoma | 1.08e-19 | 1 |
mycosis fungoides | 1.08e-19 | 1 |
lymphoma | 3.63e-08 | 10 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.