FFCP PHASE1:Hg19::chr10:117184382..117184383,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C33|description=CAGE_peak_at_chr10:117184382..117184383,+|id=chr10:117184382..117184383,+|ontology_enrichment_celltype=CL:0002328!5.34e-07!3|ontology_enrichment_celltype_v019=CL:0000764;1.28e-79;2!CL:0000558;1.28e-79;2!CL:0000307;1.96e-14;3!CL:0002543;6.13e-08;6!CL:0002548;7.01e-08;6|ontology_enrichment_celltype_v019_2=CL:0000764,1.56e-79,2;CL:0000765,1.56e-79,2;CL:0000050,1.56e-79,2;CL:0000038,1.56e-79,2;CL:0000558,1.56e-79,2;CL:0000547,1.56e-79,2;CL:0000549,1.56e-79,2;CL:0000550,1.56e-79,2;CL:0000552,1.56e-79,2;CL:0000068,1.83e-14,3;CL:0000069,1.83e-14,3;CL:0000307,1.83e-14,3;CL:0000377,1.83e-14,3;CL:0002543,5.92e-08,6;CL:0002548,7.25e-08,6|ontology_enrichment_development_v019=CL:0000377;1.96e-14;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004815!5.34e-07!3;UBERON:0002031!5.34e-07!3|ontology_enrichment_uberon_v019=UBERON:0003126;6.21e-07;7!UBERON:0001005;6.21e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0.294605907474837,0,0,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0,0,0,0.679856056185397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0.22452937262617,0.337834441449967,4.5994991239765,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0.352303495931295,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,4.38519753291869,7.05875717767231,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0.561594356226918,0,0,0,0.169291777801603,0.642352300414798,0,0,0,0.307240764308458,0,0.166849141711909,0,0.556812347790485,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0.146178634172371,0,0,0,0,0.274083849293502,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0.218419276384028,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0.258355639344024,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:117184382..117184383,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_at_chr10:117184382..117184383,+ | |||
|id=chr10:117184382..117184383,+ | |||
|ontology_enrichment_celltype=CL:0002328!5.34e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.28e-79;2!CL:0000558;1.28e-79;2!CL:0000307;1.96e-14;3!CL:0002543;6.13e-08;6!CL:0002548;7.01e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.56e-79,2;CL:0000765,1.56e-79,2;CL:0000050,1.56e-79,2;CL:0000038,1.56e-79,2;CL:0000558,1.56e-79,2;CL:0000547,1.56e-79,2;CL:0000549,1.56e-79,2;CL:0000550,1.56e-79,2;CL:0000552,1.56e-79,2;CL:0000068,1.83e-14,3;CL:0000069,1.83e-14,3;CL:0000307,1.83e-14,3;CL:0000377,1.83e-14,3;CL:0002543,5.92e-08,6;CL:0002548,7.25e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000377;1.96e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004815!5.34e-07!3;UBERON:0002031!5.34e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;6.21e-07;7!UBERON:0001005;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,6.04e-07,7;UBERON:0001005,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0.730310090387373,0,0.123121058076788,0.408001382488506,0,0,0.273748850145768,0,0.0764134057479513,0.246301768349837,0.0787107813136792,0,0,0.154816123316076,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.334231370655521,0.294605907474837,0,0,0.25618263945135,0.260118695119756,0,0,0.289803085735052,0,0,0,0.679856056185397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0.367663080345869,0,0,0.22452937262617,0.337834441449967,4.5994991239765,0,0.183201743930407,0,0,0,0,0.12663051166458,0,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0,0,0,0.352303495931295,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0.30648779579902,0,0,0,0,0,0,0.103052529238439,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0.144366447761074,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0,0,0.845302752556,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,4.38519753291869,7.05875717767231,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0,0,0.379473173765715,0.349934720244983,0,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0.144269212976445,0.0711418433484141,0,0,0,0,0,0.561594356226918,0,0,0,0.169291777801603,0.642352300414798,0,0,0,0.307240764308458,0,0.166849141711909,0,0.556812347790485,0,0,0.33307196799782,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0,0,0.146178634172371,0,0,0,0,0.274083849293502,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.249960815924213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0.157265941855896,0.218419276384028,0,0,0.247871528518004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0.0939839179798536,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0.258355639344024,0.0620747142958579,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:117184382..117184383,+ | |||
}} |
Revision as of 11:54, 10 September 2013
Short description: | p@chr10:117184382..117184383, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:117184382..117184383, + |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.56e-79 | 2 |
erythroblast | 1.56e-79 | 2 |
megakaryocyte-erythroid progenitor cell | 1.56e-79 | 2 |
erythroid progenitor cell | 1.56e-79 | 2 |
reticulocyte | 1.56e-79 | 2 |
proerythroblast | 1.56e-79 | 2 |
basophilic erythroblast | 1.56e-79 | 2 |
polychromatophilic erythroblast | 1.56e-79 | 2 |
orthochromatic erythroblast | 1.56e-79 | 2 |
duct epithelial cell | 1.83e-14 | 3 |
branched duct epithelial cell | 1.83e-14 | 3 |
tracheal epithelial cell | 1.83e-14 | 3 |
tracheoblast | 1.83e-14 | 3 |
vein endothelial cell | 5.92e-08 | 6 |
cardiac fibroblast | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
trachea | 6.04e-07 | 7 |
respiratory airway | 6.04e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.