FFCP PHASE1:Hg19::chr11:104035055..104035072,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80310|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=30620|TSSclassifier=S|UniProt=Q9GZP0|association_with_transcript=-28bp_to_NM_025208,NM_033135,uc001php.2,uc001phq.2_5end|coexpression_cluster_id=C1327|description=CAGE_peak_6_at_PDGFD_5end|id=chr11:104035055..104035072,-|ontology_enrichment_celltype=CL:0000136!6.37e-09!15;CL:0000325!6.62e-07!39|ontology_enrichment_celltype_v019=CL:0000136;5.37e-09;13!CL:0002615;4.07e-07;3!CL:0002334;8.48e-07;12|ontology_enrichment_celltype_v019_2=CL:0000136,8.18e-12,15;CL:0002615,3.77e-07,3;CL:0002334,8.57e-07,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.89e-07!115|ontology_enrichment_uberon_v019=UBERON:0004457;8.87e-14;9!UBERON:0000042;8.87e-14;9!UBERON:0003688;3.84e-12;6!UBERON:0002358;3.84e-12;6!UBERON:0003684;3.84e-12;6!UBERON:0001178;3.84e-12;6!UBERON:0004905;8.84e-08;8!UBERON:0000982;8.84e-08;8!UBERON:0004770;8.84e-08;8!UBERON:0005904;8.70e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.52e-12,6;UBERON:0002358,4.52e-12,6;UBERON:0003684,4.52e-12,6;UBERON:0001178,4.52e-12,6;UBERON:0004457,8.25e-10,12;UBERON:0000042,8.25e-10,12;UBERON:0004905,9.17e-08,8;UBERON:0000982,9.17e-08,8;UBERON:0004770,9.17e-08,8;UBERON:0005904,4.69e-07,4|phase1_expression=4.90531624030503,4.92431204949261,5.49722175974288,7.00513088471913,3.5756887554183,6.97870819280295,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0.436882744260345,0,2.47532705920093,0.994192127183747,0,0.602694528023977,0.730310090387373,0,0.123121058076788,0,0,1.71741592278634,0.547497700291537,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,1.24930726552346,0,0,0.403213486449465,0,0.144824403882799,4.87613732627923,0,1.2786256184353,0,0,0.289693037921647,0,0,0.378139268656271,0.443458794925128,0.263504357079378,0.0654895377488563,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0,0.516833518338658,2.49036383880697,0.33472061276467,0,0,0,0,0,0,0,0.450445921933289,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.397227542439656,0.860509862246441,0,0,0,0,7.46906484959439,0,0.490385709340376,0.454072282934794,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0.408308342509787,0,0.723280468230358,3.56400857184616,3.70900393917835,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,0,3.30523729594513,0.340296549480063,0,3.41691822109708,6.14602513362729,0,1.13357782162283,0.257640540045629,1.30281799432113,0.675105328965065,0.487185025805993,0,4.51044503347267,2.90962902273861,0.355009592516614,0.201504196455281,0,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.10366105501537,0.252320850875628,0,1.56449532329816,1.92972281457866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4694440679884,0,0,0,0,0,0,0.171567810298526,0,0,0,0.185176890317059,0,0,1.44331342025273,0.115930404975077,0.587043471179108,0.866198686566443,0.462985512576611,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0.253991577168676,0,0,0,0.102827492703324,0,0.857479297891735,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,3.0025378668211,1.62786481617433,0.823240336780769,0,2.13235169245527,0,5.72734816413214,1.74306691720059,3.09916272664377,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0,0,0.591092280605782,0,0.128343036279748,2.03275699377971,0,0,0.167516265334349,0.637938751653163,0,0,0,2.57652132610194,1.50051156317903,1.08506009479894,0.415941723061614,0,0,0.35142424497814,2.40756879782175,0,0,0,0.184369168541703,0,0,0,0,0,0.106727557803444,0,0,0.30239029332968,1.24053903909388,3.06923946576125,2.80660094433074,3.20347873139252,4.60536524160033,2.0911009748669,2.96836132889982,0.154209693802656,0,0.0821271560138091,0,0,0.120859449591622,0.40101294060657,0,0.459257792658427,0.182091168006717,1.96686622439136,0.451199612907412,0.15403067420883,0,0,0,0,0,0.215915916102139,0,0.270946437543853,0,0,0.831076008928724,0.223874754722178,0,0,0,0.656029291399411,0.976135183992909,0.721287081534056,0.457847324091717,0.82509499920588,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0,0.712256285173899,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0.143124886741991,0,0,2.47819252100972,0.255897791311334,0.855877976067841,0,0,1.61885211824983,3.0199073270966,0.353437207037059,0,0,0,0,0,0,0.682499557039929,1.1312434556297,0,1.10273068709225,0,0,0,0,0,0,0,0.286822704408103,0,0,0.354761064070598,0,4.61012850143863,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,5.01268954180134,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0.614481528616916,0.671028323677248,1.00109485027145,0,0.55681234779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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=80310 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30620 | |||
|TSSclassifier=S | |||
|UniProt=Q9GZP0 | |||
|association_with_transcript=-28bp_to_NM_025208,NM_033135,uc001php.2,uc001phq.2_5end | |||
|coexpression_cluster_id=C1327 | |||
|description=CAGE_peak_6_at_PDGFD_5end | |||
|id=chr11:104035055..104035072,- | |||
|ontology_enrichment_celltype=CL:0000136!6.37e-09!15;CL:0000325!6.62e-07!39 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.37e-09;13!CL:0002615;4.07e-07;3!CL:0002334;8.48e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,8.18e-12,15;CL:0002615,3.77e-07,3;CL:0002334,8.57e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.89e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;8.87e-14;9!UBERON:0000042;8.87e-14;9!UBERON:0003688;3.84e-12;6!UBERON:0002358;3.84e-12;6!UBERON:0003684;3.84e-12;6!UBERON:0001178;3.84e-12;6!UBERON:0004905;8.84e-08;8!UBERON:0000982;8.84e-08;8!UBERON:0004770;8.84e-08;8!UBERON:0005904;8.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,4.52e-12,6;UBERON:0002358,4.52e-12,6;UBERON:0003684,4.52e-12,6;UBERON:0001178,4.52e-12,6;UBERON:0004457,8.25e-10,12;UBERON:0000042,8.25e-10,12;UBERON:0004905,9.17e-08,8;UBERON:0000982,9.17e-08,8;UBERON:0004770,9.17e-08,8;UBERON:0005904,4.69e-07,4 | |||
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| |||
|short_description=p6@PDGFD | |||
}} |
Revision as of 15:26, 10 September 2013
Short description: | p6@PDGFD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PDGFD_5end |
Coexpression cluster: | C1327_Adipocyte_glioblastoma_Fibroblast_Cardiac_aorta_eye_Mesothelial |
Association with transcript: | -28bp_to_NM_025208, NM_033135, uc001php.2, uc001phq.2_5end |
EntrezGene: | PDGFD |
HGNC: | 30620 |
UniProt: | Q9GZP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 8.18e-12 | 15 |
adipocyte of omentum tissue | 3.77e-07 | 3 |
preadipocyte | 8.57e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 4.52e-12 | 6 |
peritoneum | 4.52e-12 | 6 |
abdominal cavity | 4.52e-12 | 6 |
visceral peritoneum | 4.52e-12 | 6 |
cavity lining | 8.25e-10 | 12 |
serous membrane | 8.25e-10 | 12 |
articulation | 9.17e-08 | 8 |
skeletal joint | 9.17e-08 | 8 |
articular system | 9.17e-08 | 8 |
duct of male reproductive system | 4.69e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.