FFCP PHASE1:Hg19::chr11:122288949..122288959,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C3105|description=CAGE_peak_at_chr11:122288949..122288959,-|id=chr11:122288949..122288959,-|ontology_enrichment_celltype=CL:0002541!2.74e-30!3;CL:1000415!4.25e-21!2;CL:0002537!1.16e-18!5|ontology_enrichment_celltype_v019=CL:1000415;1.15e-15;2!CL:0002535;2.05e-15;2!CL:0002541;9.90e-11;3!CL:0002537;6.04e-07;5!CL:0000349;6.57e-07;19|ontology_enrichment_celltype_v019_2=CL:1000415,1.15e-15,2;CL:0002535,2.37e-15,2;CL:0002541,8.17e-11,3;CL:0000349,6.57e-07,19;CL:0002537,6.77e-07,5|ontology_enrichment_development_v019=UBERON:0003124;9.98e-30;1|ontology_enrichment_disease=DOID:1799!4.01e-11!1;DOID:10165!4.01e-11!1;DOID:1798!4.01e-11!1|ontology_enrichment_disease_v019=DOID:4362;6.04e-07;5|ontology_enrichment_disease_v019_2=DOID:4362,6.39e-07,5|ontology_enrichment_uberon=UBERON:0005631!1.90e-56!14;UBERON:0000158!1.90e-56!14;UBERON:0003124!1.30e-35!7;UBERON:0000478!1.66e-32!24;UBERON:0000476!2.74e-30!3;UBERON:0000920!2.74e-30!3;UBERON:0000305!3.99e-23!7;UBERON:0004871!2.82e-20!8;UBERON:0002110!2.12e-14!3;UBERON:0006242!2.12e-14!3;UBERON:0004923!4.97e-13!57;UBERON:0001987!3.64e-11!4;UBERON:0004340!3.64e-11!4|ontology_enrichment_uberon_v019=UBERON:0006955;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0005631;2.81e-12;10!UBERON:0000158;2.81e-12;10!UBERON:0000478;2.43e-11;24!UBERON:0002110;6.73e-11;3!UBERON:0003124;9.90e-11;3!UBERON:0000920;9.90e-11;3!UBERON:0001987;1.82e-08;4|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.89e-19,14;UBERON:0000158,6.89e-19,14;UBERON:0003124,2.90e-17,7;UBERON:0006955,2.37e-15,2;UBERON:0004801,2.37e-15,2;UBERON:0000478,2.43e-11,24;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0000920,8.17e-11,3;UBERON:0001987,1.82e-08,4;UBERON:0004340,1.82e-08,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,1.18785872333055,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39294730528644,0,0,0,0,0,0,0,0,0,0,0,3.32437350649165,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57236873471653,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:122288949..122288959,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C3105 | |||
|description=CAGE_peak_at_chr11:122288949..122288959,- | |||
|id=chr11:122288949..122288959,- | |||
|ontology_enrichment_celltype=CL:0002541!2.74e-30!3;CL:1000415!4.25e-21!2;CL:0002537!1.16e-18!5 | |||
|ontology_enrichment_celltype_v019=CL:1000415;1.15e-15;2!CL:0002535;2.05e-15;2!CL:0002541;9.90e-11;3!CL:0002537;6.04e-07;5!CL:0000349;6.57e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:1000415,1.15e-15,2;CL:0002535,2.37e-15,2;CL:0002541,8.17e-11,3;CL:0000349,6.57e-07,19;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;9.98e-30;1 | |||
|ontology_enrichment_disease=DOID:1799!4.01e-11!1;DOID:10165!4.01e-11!1;DOID:1798!4.01e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;6.04e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.90e-56!14;UBERON:0000158!1.90e-56!14;UBERON:0003124!1.30e-35!7;UBERON:0000478!1.66e-32!24;UBERON:0000476!2.74e-30!3;UBERON:0000920!2.74e-30!3;UBERON:0000305!3.99e-23!7;UBERON:0004871!2.82e-20!8;UBERON:0002110!2.12e-14!3;UBERON:0006242!2.12e-14!3;UBERON:0004923!4.97e-13!57;UBERON:0001987!3.64e-11!4;UBERON:0004340!3.64e-11!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;2.05e-15;2!UBERON:0004801;2.05e-15;2!UBERON:0005631;2.81e-12;10!UBERON:0000158;2.81e-12;10!UBERON:0000478;2.43e-11;24!UBERON:0002110;6.73e-11;3!UBERON:0003124;9.90e-11;3!UBERON:0000920;9.90e-11;3!UBERON:0001987;1.82e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.89e-19,14;UBERON:0000158,6.89e-19,14;UBERON:0003124,2.90e-17,7;UBERON:0006955,2.37e-15,2;UBERON:0004801,2.37e-15,2;UBERON:0000478,2.43e-11,24;UBERON:0002110,6.73e-11,3;UBERON:0006242,6.73e-11,3;UBERON:0000920,8.17e-11,3;UBERON:0001987,1.82e-08,4;UBERON:0004340,1.82e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.47748896947538,1.18785872333055,0.921482106297696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.0915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39294730528644,0,0,0,0,0,0,0,0,0,0,0,3.32437350649165,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57236873471653,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:122288949..122288959,- | |||
}} |
Revision as of 16:18, 10 September 2013
Short description: | p@chr11:122288949..122288959, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:122288949..122288959, - |
Coexpression cluster: | C3105_placenta_amniotic_chorionic_Placental_epidermoid_gall_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of gall bladder | 1.15e-15 | 2 |
epithelial cell of cervix | 2.37e-15 | 2 |
chorionic membrane mesenchymal stem cell | 8.17e-11 | 3 |
extraembryonic cell | 6.57e-07 | 19 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.89e-19 | 14 |
membranous layer | 6.89e-19 | 14 |
chorion | 2.90e-17 | 7 |
uterine epithelium | 2.37e-15 | 2 |
cervix epithelium | 2.37e-15 | 2 |
extraembryonic structure | 2.43e-11 | 24 |
gallbladder | 6.73e-11 | 3 |
gall bladder primordium | 6.73e-11 | 3 |
egg chorion | 8.17e-11 | 3 |
placenta | 1.82e-08 | 4 |
allantois | 1.82e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 6.39e-07 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.