FFCP PHASE1:Hg19::chr11:2159622..2159637,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=N|UniProt=|association_with_transcript=-377bp_to_BC017277_5end|coexpression_cluster_id=C172|description=CAGE_peak_8_at_BC017277_5end|id=chr11:2159622..2159637,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000349;3.40e-21;19!CL:0002575;6.19e-10;2!CL:0002536;9.95e-10;2!CL:0002537;1.73e-08;5!CL:0002541;5.60e-07;3|ontology_enrichment_celltype_v019_2=CL:0000349,3.26e-21,19;CL:0002575,6.19e-10,2;CL:0002536,9.96e-10,2;CL:0002537,1.71e-08,5;CL:0002541,5.60e-07,3|ontology_enrichment_development_v019=UBERON:0004161;2.46e-09;11!UBERON:0009497;7.51e-08;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!1.52e-15!14;UBERON:0000158!1.52e-15!14;UBERON:0003124!2.22e-11!7;UBERON:0000478!9.45e-11!24;UBERON:0001987!3.83e-07!4;UBERON:0004340!3.83e-07!4;UBERON:0004119!8.16e-07!169;UBERON:0000925!8.16e-07!169;UBERON:0006595!8.16e-07!169|ontology_enrichment_uberon_v019=UBERON:0000478;1.57e-23;24!UBERON:0005631;7.93e-21;10!UBERON:0000158;7.93e-21;10!UBERON:0000305;1.58e-15;7!UBERON:0001987;4.49e-10;4!UBERON:0000922;8.15e-08;49!UBERON:0002107;2.88e-07;19!UBERON:0006925;2.88e-07;19!UBERON:0003124;5.60e-07;3!UBERON:0000920;5.60e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.88e-29,14;UBERON:0000158,2.88e-29,14;UBERON:0000478,1.49e-23,24;UBERON:0000305,1.56e-15,7;UBERON:0003124,2.16e-15,7;UBERON:0004871,1.49e-13,8;UBERON:0001987,4.16e-10,4;UBERON:0004340,4.16e-10,4;UBERON:0002107,2.59e-07,19;UBERON:0006925,2.59e-07,19;UBERON:0008836,2.59e-07,19;UBERON:0000920,5.60e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,9.17453762946723,9.75937819445278,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20768491452085,0.414644220061482,0.252320850875628,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,6.14942192715568,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0,0,0,0,0,0,0,1.41849132023278,0,0.428933980974443,10.8524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,1.45579603071565,0.892144943985809,0.473107245101804,0.234282829985426,0,0,0,0,0,0,11.1606659753762,18.1866014619754,0,0,0,0.909382714338778,4.99306318531491,16.0266855464731,0,0,0,0,0,0,4.45254199334973,0,0,0,0,0,5.19695633243976,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.307007349452259,0.827019434907183,0,0,0.170453254832202,3.38321735457602,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.470719003883896,0.43050537267123,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,12.6534576910976,5.93929361665277,27.9516238910301,0,0,0,0,0.844501632511974,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,1.1528195219403,0,0,14.0360510282045,0.732780747214898,74.0918338665902,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0.611030144933625,0,0,0,0.134802265961354,17.6567082405734,0.234264445725339,0,0,0,0,7.25944296291983,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0.0882561266915003,1.80784592624426,0,0,0,0.195551382734803,0,0,2.59752492456769,0,0,22.3073497220554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0.873385142327441,0.360299883542404,0,4.88455730304787,5.43944665315699,4.85305515750131,1.96854963029498,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,41.0771355627886,0,0,0.171086837884329,0,0,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-377bp_to_BC017277_5end | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_8_at_BC017277_5end | |||
|id=chr11:2159622..2159637,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;3.40e-21;19!CL:0002575;6.19e-10;2!CL:0002536;9.95e-10;2!CL:0002537;1.73e-08;5!CL:0002541;5.60e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.26e-21,19;CL:0002575,6.19e-10,2;CL:0002536,9.96e-10,2;CL:0002537,1.71e-08,5;CL:0002541,5.60e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.46e-09;11!UBERON:0009497;7.51e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.52e-15!14;UBERON:0000158!1.52e-15!14;UBERON:0003124!2.22e-11!7;UBERON:0000478!9.45e-11!24;UBERON:0001987!3.83e-07!4;UBERON:0004340!3.83e-07!4;UBERON:0004119!8.16e-07!169;UBERON:0000925!8.16e-07!169;UBERON:0006595!8.16e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.57e-23;24!UBERON:0005631;7.93e-21;10!UBERON:0000158;7.93e-21;10!UBERON:0000305;1.58e-15;7!UBERON:0001987;4.49e-10;4!UBERON:0000922;8.15e-08;49!UBERON:0002107;2.88e-07;19!UBERON:0006925;2.88e-07;19!UBERON:0003124;5.60e-07;3!UBERON:0000920;5.60e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.88e-29,14;UBERON:0000158,2.88e-29,14;UBERON:0000478,1.49e-23,24;UBERON:0000305,1.56e-15,7;UBERON:0003124,2.16e-15,7;UBERON:0004871,1.49e-13,8;UBERON:0001987,4.16e-10,4;UBERON:0004340,4.16e-10,4;UBERON:0002107,2.59e-07,19;UBERON:0006925,2.59e-07,19;UBERON:0008836,2.59e-07,19;UBERON:0000920,5.60e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,9.17453762946723,9.75937819445278,0,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605429710579726,1.72852777344,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.20768491452085,0.414644220061482,0.252320850875628,0,0,0,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0.590789906681404,0,6.14942192715568,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30788020649984,0,0,0,0,0,0,0,1.41849132023278,0,0.428933980974443,10.8524321078289,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0.542530047399471,1.45579603071565,0.892144943985809,0.473107245101804,0.234282829985426,0,0,0,0,0,0,11.1606659753762,18.1866014619754,0,0,0,0.909382714338778,4.99306318531491,16.0266855464731,0,0,0,0,0,0,4.45254199334973,0,0,0,0,0,5.19695633243976,0.200506470303285,0.184161977871793,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0.307007349452259,0.827019434907183,0,0,0.170453254832202,3.38321735457602,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0.359744915166629,0,0,0,0,0,0,0,0,0.818999468447914,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.470719003883896,0.43050537267123,0,0,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.284136146806413,12.6534576910976,5.93929361665277,27.9516238910301,0,0,0,0,0.844501632511974,0.19924798825107,0,0.503865495708552,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,1.1528195219403,0,0,14.0360510282045,0.732780747214898,74.0918338665902,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0,0.611030144933625,0,0,0,0.134802265961354,17.6567082405734,0.234264445725339,0,0,0,0,7.25944296291983,0.61214552326098,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0.0882561266915003,1.80784592624426,0,0,0,0.195551382734803,0,0,2.59752492456769,0,0,22.3073497220554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798716001995964,0,0,0.873385142327441,0.360299883542404,0,4.88455730304787,5.43944665315699,4.85305515750131,1.96854963029498,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.113312091520126,0,41.0771355627886,0,0,0.171086837884329,0,0,0.314408610199332,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.800055529326307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0.252071696221718,0,0,0,0,0.235939446695481,0,0,0,0,1.39241355481392,0.150420656698515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,2.83847584520444,0,0,0,0.0657727735628491,0,0,0.078493092850514,0,0.280272163313789,0,0,0,0.285906176706625,0,0,3.99874026295933,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0.121917924982269,0,0.102662806856247,12.7579587447202,0.971421986118279,0,5.17272015419557,0,0,0,0,0,1.96703604453562,0,0.245148321753905,0,0,0.297046400327086,1.2679671827502,0,0,0.0644578879735772,0,0,0,0,0.730336388246517,0,0,0.157771562193185,0.0679914901909147,0.436350690340377,3.7031878836078,0,0,1.29787968637137,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,6.18967521805725,0,0.124149428591716,0,0,3.43599221228973,0.217716747896961,33.5388635063575,0,0,5.98788641782824,0.0814032686109745,0,0,0.628776414746108,7.03922827210363,0.122241444182866,1.22068853494722,0,0,0 | |||
|short_description=p8@BC017277 | |||
}} |
Revision as of 17:12, 10 September 2013
Short description: | p8@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -377bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.26e-21 | 19 |
central nervous system pericyte | 6.19e-10 | 2 |
amniotic epithelial cell | 9.96e-10 | 2 |
amnion mesenchymal stem cell | 1.71e-08 | 5 |
chorionic membrane mesenchymal stem cell | 5.60e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.88e-29 | 14 |
membranous layer | 2.88e-29 | 14 |
extraembryonic structure | 1.49e-23 | 24 |
amnion | 1.56e-15 | 7 |
chorion | 2.16e-15 | 7 |
somatic layer of lateral plate mesoderm | 1.49e-13 | 8 |
placenta | 4.16e-10 | 4 |
allantois | 4.16e-10 | 4 |
liver | 2.59e-07 | 19 |
digestive gland | 2.59e-07 | 19 |
liver bud | 2.59e-07 | 19 |
egg chorion | 5.60e-07 | 3 |
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