FFCP PHASE1:Hg19::chr12:106994905..106994954,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5992|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9985|TSSclassifier=W|UniProt=B4DZB7,Q33E94|association_with_transcript=0bp_to_ENST00000357881,ENST00000536688,ENST00000536722,NM_001206691,uc001tls.2,uc001tlt.2,uc010swv.1_5end|coexpression_cluster_id=C1|description=CAGE_peak_6_at_RFX4_5end|id=chr12:106994905..106994954,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002149;1.57e-09;6!CL:0002255;1.57e-09;6|ontology_enrichment_celltype_v019_2=CL:0002149,1.57e-09,6;CL:0002255,1.57e-09,6|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3001;1.57e-09;6|ontology_enrichment_disease_v019_2=DOID:3001,1.57e-09,6|ontology_enrichment_uberon=UBERON:0000007!2.32e-12!2;UBERON:0000473!3.54e-12!8;UBERON:0003135!4.08e-09!11;UBERON:0003296!8.14e-07!4;UBERON:0010133!8.14e-07!4|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003133;2.11e-10;44!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0003133,3.42e-10,48;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69827928953084,11.2544934665595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p6@RFX4}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5992 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9985 | |||
|TSSclassifier=W | |||
|UniProt=B4DZB7,Q33E94 | |||
|association_with_transcript=0bp_to_ENST00000357881,ENST00000536688,ENST00000536722,NM_001206691,uc001tls.2,uc001tlt.2,uc010swv.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_RFX4_5end | |||
|id=chr12:106994905..106994954,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002149;1.57e-09;6!CL:0002255;1.57e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.57e-09,6;CL:0002255,1.57e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;1.57e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,1.57e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000007!2.32e-12!2;UBERON:0000473!3.54e-12!8;UBERON:0003135!4.08e-09!11;UBERON:0003296!8.14e-07!4;UBERON:0010133!8.14e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003133;2.11e-10;44!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0003133,3.42e-10,48;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22;UBERON:0005156,1.88e-08,59;UBERON:0000990,1.88e-08,59 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.92937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42304773014896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69827928953084,11.2544934665595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@RFX4 | |||
}} |
Revision as of 20:39, 10 September 2013
Short description: | p6@RFX4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_RFX4_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000357881, ENST00000536688, ENST00000536722, NM_001206691, uc001tls.2, uc001tlt.2, uc010swv.1_5end |
EntrezGene: | RFX4 |
HGNC: | 9985 |
UniProt: | B4DZB7Q33E94 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.57e-09 | 6 |
stromal cell of endometrium | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
reproductive organ | 3.42e-10 | 48 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |
reproductive structure | 1.88e-08 | 59 |
reproductive system | 1.88e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.57e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.