FFCP PHASE1:Hg19::chr12:32259684..32259692,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=636|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1049|TSSclassifier=S|UniProt=|association_with_transcript=-76bp_to_ENST00000551848_5end|description=CAGE_peak_8_at_BICD1_5end|id=chr12:32259684..32259692,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;4.65e-24;7!CL:0000586;4.65e-24;7|ontology_enrichment_celltype_v019_2=CL:0000039,4.84e-24,7;CL:0000586,4.84e-24,7|ontology_enrichment_development_v019=UBERON:0009117;4.59e-17;10!UBERON:0005564;4.59e-17;10|ontology_enrichment_disease=DOID:0050686!2.30e-07!137|ontology_enrichment_disease_v019=DOID:3095;4.28e-08;22!DOID:2994;4.28e-08;22|ontology_enrichment_disease_v019_2=DOID:3095,4.34e-08,22;DOID:2994,4.34e-08,22|ontology_enrichment_uberon=UBERON:0000073!3.76e-08!94;UBERON:0001016!3.76e-08!94;UBERON:0005743!2.00e-07!86;UBERON:0001017!3.42e-07!82|ontology_enrichment_uberon_v019=UBERON:0000473;3.79e-21;8!UBERON:0003135;1.41e-15;11!UBERON:0000922;4.61e-09;49!UBERON:0000991;1.87e-08;21!UBERON:0003101;4.28e-08;22!UBERON:0000079;4.28e-08;22!UBERON:0002114;2.71e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.92e-21,8;UBERON:0003135,1.45e-15,11;UBERON:0000991,1.90e-08,21;UBERON:0009196,1.90e-08,21;UBERON:0009117,1.90e-08,21;UBERON:0005564,1.90e-08,21;UBERON:0004176,4.34e-08,22;UBERON:0003101,4.34e-08,22;UBERON:0000079,4.34e-08,22;UBERON:0002114,2.63e-07,2|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0.889509253863555,0,0.400395987036012,0,0,0,1.1384259382189,0,0.382273228125229,0,0,0.263384084775077,0.196709770113833,0,0,0,0,0.473447805734733,0,0.668462741311041,0,0.221533894583621,0.270803863765016,0.128091319725675,0.260118695119756,0.164437904603676,0.276350017785848,0.289803085735052,0.14828656316206,0.267540828089713,1.04535523804977,0.453237370790265,0,0.34362744548263,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0.419499436209906,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0.673588117878509,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0.573673241497627,0,0.560677600142307,0,0,0,0.269421344139376,0,0,0.576175924479999,0,0,0,0,0.23486899728753,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0,0,0.30648779579902,0.300476117813194,0,0,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,0.662648841607426,0.813357600086629,0.725627385107593,0.252320850875628,1.82488679537915,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0.381988425558278,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358121926479791,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0.773288812777695,0.335032530668698,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0,0.184161977871793,0.114814448164607,0.182091168006717,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0.325378394664303,0.103041011647722,0.183138929636687,0.165018999841176,0,0.650060246036521,0,0,0,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.127612712494584,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.320472213382419,0,0,0,0,0.0711418433484141,0.318852545457645,0.199579371432817,0.191505370132367,0.846694330895531,0.324621940274555,0,0,0.156679895773023,0,0.338583555603207,0,0.201799707191048,0,0,0.307240764308458,0.671028323677248,0.834245708559542,0.19538809540204,0,0,0.540911356951966,0.66614393599564,0,0,0,0.849523652246594,0.222886768554957,0,0,0,0,0,0.422008249231538,0,0.16480387422676,0.211125408127993,0,0.552567831062295,0,0.20453736500431,0.246169610922139,0,0.269605053441981,0,0.511572370226872,0.0986434056369336,0,0,0,0.0927680981618513,1.99613798001194,0,0,0,0,0.508507300585533,0,0,0,0,0.885741385813839,0.241192877250816,0,0.221158519862449,0,0.438770794307945,0.10893846351899,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=636 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1049 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-76bp_to_ENST00000551848_5end | |||
|description=CAGE_peak_8_at_BICD1_5end | |||
|id=chr12:32259684..32259692,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.65e-24;7!CL:0000586;4.65e-24;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,4.84e-24,7;CL:0000586,4.84e-24,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.59e-17;10!UBERON:0005564;4.59e-17;10 | |||
|ontology_enrichment_disease=DOID:0050686!2.30e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.28e-08;22!DOID:2994;4.28e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.34e-08,22;DOID:2994,4.34e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!3.76e-08!94;UBERON:0001016!3.76e-08!94;UBERON:0005743!2.00e-07!86;UBERON:0001017!3.42e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.79e-21;8!UBERON:0003135;1.41e-15;11!UBERON:0000922;4.61e-09;49!UBERON:0000991;1.87e-08;21!UBERON:0003101;4.28e-08;22!UBERON:0000079;4.28e-08;22!UBERON:0002114;2.71e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,3.92e-21,8;UBERON:0003135,1.45e-15,11;UBERON:0000991,1.90e-08,21;UBERON:0009196,1.90e-08,21;UBERON:0009117,1.90e-08,21;UBERON:0005564,1.90e-08,21;UBERON:0004176,4.34e-08,22;UBERON:0003101,4.34e-08,22;UBERON:0000079,4.34e-08,22;UBERON:0002114,2.63e-07,2 | |||
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| |||
|short_description=p8@BICD1 | |||
}} |
Revision as of 22:28, 10 September 2013
Short description: | p8@BICD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_BICD1_5end |
Coexpression cluster: | NA |
Association with transcript: | -76bp_to_ENST00000551848_5end |
EntrezGene: | BICD1 |
HGNC: | 1049 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 4.84e-24 | 7 |
germ cell | 4.84e-24 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 3.92e-21 | 8 |
male reproductive organ | 1.45e-15 | 11 |
gonad | 1.90e-08 | 21 |
indifferent external genitalia | 1.90e-08 | 21 |
indifferent gonad | 1.90e-08 | 21 |
gonad primordium | 1.90e-08 | 21 |
external genitalia | 4.34e-08 | 22 |
male organism | 4.34e-08 | 22 |
male reproductive system | 4.34e-08 | 22 |
duodenum | 2.63e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.34e-08 | 22 |
germ cell cancer | 4.34e-08 | 22 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.