FFCP PHASE1:Hg19::chr13:46619549..46619573,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23091|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=20368|TSSclassifier=W|UniProt=|association_with_transcript=68bp_to_AB384536,BC156055,BC157032_5end|coexpression_cluster_id=C63|description=CAGE_peak_28_at_ZC3H13_5end|id=chr13:46619549..46619573,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000047;1.64e-09;2!CL:0000746;7.28e-07;3|ontology_enrichment_celltype_v019_2=CL:0000746,6.88e-07,3;CL:0000513,6.88e-07,3|ontology_enrichment_development_v019=UBERON:0000358;5.26e-18;1!UBERON:0005754;1.12e-17;1!UBERON:0007297;1.64e-09;2!CL:0000513;7.28e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1909;1.64e-09;2!DOID:171;1.02e-07;10|ontology_enrichment_disease_v019_2=DOID:1909,2.02e-09,2;DOID:171,1.02e-07,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000998;1.12e-17;1!UBERON:0006868;1.12e-17;1!UBERON:0006947;9.37e-07;3!UBERON:0004054;9.37e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000998,8.72e-18,1;UBERON:0006868,8.72e-18,1;UBERON:0006947,8.62e-07,3;UBERON:0004054,8.62e-07,3|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.47296445977717,0,0.645484683583826,0,0.376484679085209,0.545812300115692,0.224723484445085,0.612167784741805,0,0,0,0.398927315243264,0.426224750532694,1.45104619314292,0.56738522469114,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0.616804496998528,0,0,0,0,0,0,0.221533894583621,0,0.128091319725675,0.260118695119756,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0.802320587350522,0,2.43806866313962,0,0,0,0.50133791063589,0,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0.597794722207204,0.117434498643765,0,0.280901613404497,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0.113432183160021,0.179389635688862,0,0.423863802319124,0.300091096084402,0.103052529238439,0.257640540045629,0,0.168776332241266,0.0974370051611986,0,0,0,0,0.10075209822764,0.169560592310488,0,0,0.286804595389004,0,0.265059536642971,0,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0.118306800039844,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,0,0,0,0,0.381988425558278,0,0,0.616964956219941,0.600686115687835,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0.128343036279748,0,1.30139853857622,0,0,0,0.749007023947182,0,0,0,0,0,0.415941723061614,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0,0.213455115606889,0,0,0,0,0.153461973288062,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.178064071293475,0,0,0.127612712494584,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0.213648142254946,0,0,0,0,0.142283686696828,0,0.399158742865633,0,0,0,0,0,0.783399478865116,0,0.169291777801603,0.321176150207399,0.403599414382095,0,0.343505344755765,0,0,0,0.586164286206121,0,0,0,0.66614393599564,0,0,0,0,0.111443384277478,0,0.23874448473769,0.593929361665277,1.84296421259539,0,0,0.111308705022906,0.16480387422676,0.211125408127993,0.398495976502139,0,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,3.99227596002388,0,0.0874599999961957,0,0.341380344856499,0,0.236387681767936,0,0,0.694499979733169,0,0.241192877250816,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0.0897576444097721,0.217294743844016,0.31900115973192,0,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0.432777279484182,0,0.0884575645033392,0,0,0,0,0,0,0.234264445725339,0.364909578431332,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0,0,0,0,0.0967563312890851,0,0,0,0,0,0.137041924646751,0.19871461170299,0.189932387867636,0.586654148204409,0.0801588202515337,0,0.799238438328521,0.864542502924636,0,0.17159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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=23091 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=20368 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=68bp_to_AB384536,BC156055,BC157032_5end | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_28_at_ZC3H13_5end | |||
|id=chr13:46619549..46619573,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.64e-09;2!CL:0000746;7.28e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,6.88e-07,3;CL:0000513,6.88e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.26e-18;1!UBERON:0005754;1.12e-17;1!UBERON:0007297;1.64e-09;2!CL:0000513;7.28e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;1.64e-09;2!DOID:171;1.02e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,2.02e-09,2;DOID:171,1.02e-07,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;1.12e-17;1!UBERON:0006868;1.12e-17;1!UBERON:0006947;9.37e-07;3!UBERON:0004054;9.37e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,8.72e-18,1;UBERON:0006868,8.72e-18,1;UBERON:0006947,8.62e-07,3;UBERON:0004054,8.62e-07,3 | |||
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| |||
|short_description=p28@ZC3H13 | |||
}} |
Revision as of 02:22, 11 September 2013
Short description: | p28@ZC3H13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_28_at_ZC3H13_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | 68bp_to_AB384536, BC156055, BC157032_5end |
EntrezGene: | ZC3H13 |
HGNC: | 20368 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 6.88e-07 | 3 |
cardiac muscle myoblast | 6.88e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 8.72e-18 | 1 |
seminal fluid secreting gland | 8.72e-18 | 1 |
male genital duct | 8.62e-07 | 3 |
internal male genitalia | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 2.02e-09 | 2 |
neuroectodermal tumor | 1.02e-07 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.