FFCP PHASE1:Hg19::chr13:98927901..98927902,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:98927901..98927902,+|id=chr13:98927901..98927902,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;5.77e-07;1!CL:0002625;5.77e-07;1!CL:0000216;5.77e-07;1!CL:0000313;5.77e-07;1|ontology_enrichment_celltype_v019_2=CL:0000511,3.40e-07,1;CL:0002625,3.40e-07,1;CL:0000216,3.40e-07,1;CL:0000313,8.67e-07,1|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:2152;5.77e-07;1|ontology_enrichment_disease_v019_2=DOID:2152,8.67e-07,1|ontology_enrichment_uberon=UBERON:0001017!5.61e-16!82;UBERON:0000073!2.92e-15!94;UBERON:0001016!2.92e-15!94;UBERON:0005743!3.20e-15!86;UBERON:0001049!7.36e-14!57;UBERON:0005068!7.36e-14!57;UBERON:0006241!7.36e-14!57;UBERON:0007135!7.36e-14!57;UBERON:0000955!8.77e-14!69;UBERON:0006238!8.77e-14!69;UBERON:0002616!4.47e-12!59;UBERON:0002346!6.85e-12!90;UBERON:0003075!2.14e-11!86;UBERON:0007284!2.14e-11!86;UBERON:0002020!2.53e-11!34;UBERON:0003528!2.53e-11!34;UBERON:0002780!4.80e-11!41;UBERON:0001890!4.80e-11!41;UBERON:0006240!4.80e-11!41;UBERON:0001893!6.94e-11!34;UBERON:0002791!1.55e-10!33;UBERON:0003080!1.67e-10!42;UBERON:0001869!2.65e-10!32;UBERON:0007023!2.46e-09!115;UBERON:0000924!8.17e-09!173;UBERON:0006601!8.17e-09!173;UBERON:0000956!1.30e-08!25;UBERON:0000203!1.30e-08!25;UBERON:0004121!2.28e-08!169;UBERON:0003056!1.31e-07!61;UBERON:0002619!5.19e-07!22;UBERON:0000033!6.55e-07!123|ontology_enrichment_uberon_v019=UBERON:0004909;2.87e-12;2!UBERON:0000922;5.25e-11;49!UBERON:0005795;5.77e-07;1!UBERON:0001136;5.77e-07;1!UBERON:0001343;5.77e-07;1!UBERON:0004911;5.77e-07;1!UBERON:0004910;5.77e-07;1!UBERON:0004813;5.77e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0004909,2.57e-12,2;UBERON:0001136,3.40e-07,1;UBERON:0001343,3.40e-07,1;UBERON:0004910,3.40e-07,1;UBERON:0005154,3.40e-07,1;UBERON:0005295,3.40e-07,1;UBERON:0004813,3.40e-07,1;UBERON:0005297,3.40e-07,1;UBERON:0005294,3.40e-07,1;UBERON:0010141,3.40e-07,1;UBERON:0005891,3.40e-07,1;UBERON:0004911,8.67e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0.331397375727916,0,0,0,0,0.369363174230364,0,0,0.85870796139317,0.547497700291537,0.502170558379211,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0.32592226663359,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0.486634870302636,0,0.221729397462564,0.351339142772504,0.785874452986276,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0.71153252537342,0.66944122552934,0,0.760272105718513,0,0.367663080345869,0,0.446498641420399,0,0.112611480483322,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0.117434498643765,0,0.421352420106746,0.408308342509787,0,0.103325781175765,0,0,0,0,0.673344455816265,0.125118519871964,0,0,0,0,0,0.538168907066586,0,0.423863802319124,0,0.412210116953756,0.257640540045629,0.18611685633159,0.337552664482532,0.0974370051611986,0.757301322732344,0.184099797284599,0.161646056818812,0.710019185033229,0.201504196455281,0,0,0,0,0.121973706129595,0.132529768321485,0,0,0.252320850875628,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,3.80265104465493,0.982827216677626,3.54473944008842,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0.570762456703795,0,0,0.246217006087397,0,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,0,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0.871533458600294,0.099972991182057,0,0,0,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0.260650843404249,0,0,0,0,0,0,0,0,0,0.460385919864187,0,0.256278298511402,0,0,0,0,0,0.164254312027618,0.519254429183621,0,0.846016147141356,0.200506470303285,0.0920809889358963,0.114814448164607,0.364182336013434,0.131124414959424,0,0.15403067420883,0,0,0.211103257785751,0,0,0.431831832204279,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.412164046590889,0.183138929636687,0.577566499444116,0,0,1.6068392984416,0,0.154048617114644,0,0.137836572484531,0.214840489736547,0,0,0.0890320356467374,0,0,1.27612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0.243713489631284,0,0.682499557039929,0.707027159768564,0,0,0,0,0,0,0,0,0,0.143411352204052,0.0982490410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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:98927901..98927902,+ | |||
|id=chr13:98927901..98927902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;5.77e-07;1!CL:0002625;5.77e-07;1!CL:0000216;5.77e-07;1!CL:0000313;5.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,3.40e-07,1;CL:0002625,3.40e-07,1;CL:0000216,3.40e-07,1;CL:0000313,8.67e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2152;5.77e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.67e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.61e-16!82;UBERON:0000073!2.92e-15!94;UBERON:0001016!2.92e-15!94;UBERON:0005743!3.20e-15!86;UBERON:0001049!7.36e-14!57;UBERON:0005068!7.36e-14!57;UBERON:0006241!7.36e-14!57;UBERON:0007135!7.36e-14!57;UBERON:0000955!8.77e-14!69;UBERON:0006238!8.77e-14!69;UBERON:0002616!4.47e-12!59;UBERON:0002346!6.85e-12!90;UBERON:0003075!2.14e-11!86;UBERON:0007284!2.14e-11!86;UBERON:0002020!2.53e-11!34;UBERON:0003528!2.53e-11!34;UBERON:0002780!4.80e-11!41;UBERON:0001890!4.80e-11!41;UBERON:0006240!4.80e-11!41;UBERON:0001893!6.94e-11!34;UBERON:0002791!1.55e-10!33;UBERON:0003080!1.67e-10!42;UBERON:0001869!2.65e-10!32;UBERON:0007023!2.46e-09!115;UBERON:0000924!8.17e-09!173;UBERON:0006601!8.17e-09!173;UBERON:0000956!1.30e-08!25;UBERON:0000203!1.30e-08!25;UBERON:0004121!2.28e-08!169;UBERON:0003056!1.31e-07!61;UBERON:0002619!5.19e-07!22;UBERON:0000033!6.55e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0004909;2.87e-12;2!UBERON:0000922;5.25e-11;49!UBERON:0005795;5.77e-07;1!UBERON:0001136;5.77e-07;1!UBERON:0001343;5.77e-07;1!UBERON:0004911;5.77e-07;1!UBERON:0004910;5.77e-07;1!UBERON:0004813;5.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004909,2.57e-12,2;UBERON:0001136,3.40e-07,1;UBERON:0001343,3.40e-07,1;UBERON:0004910,3.40e-07,1;UBERON:0005154,3.40e-07,1;UBERON:0005295,3.40e-07,1;UBERON:0004813,3.40e-07,1;UBERON:0005297,3.40e-07,1;UBERON:0005294,3.40e-07,1;UBERON:0010141,3.40e-07,1;UBERON:0005891,3.40e-07,1;UBERON:0004911,8.67e-07,1 | |||
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| |||
|short_description=p@chr13:98927901..98927902,+ | |||
}} |
Revision as of 03:04, 11 September 2013
Short description: | p@chr13:98927901..98927902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:98927901..98927902, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 3.40e-07 | 1 |
seminiferous tubule epithelial cell | 3.40e-07 | 1 |
Sertoli cell | 3.40e-07 | 1 |
serous secreting cell | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
epithelium of gonad | 2.57e-12 | 2 |
mesothelium | 3.40e-07 | 1 |
seminiferous tubule of testis | 3.40e-07 | 1 |
epithelium of male gonad | 3.40e-07 | 1 |
epithelial cord | 3.40e-07 | 1 |
sex cord | 3.40e-07 | 1 |
seminiferous tubule epithelium | 3.40e-07 | 1 |
testis sex cord | 3.40e-07 | 1 |
genital ridge | 3.40e-07 | 1 |
primitive sex cord of indifferent gonad | 3.40e-07 | 1 |
coelomic epithelium | 3.40e-07 | 1 |
epithelium of female gonad | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.67e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.