FFCP PHASE1:Hg19::chr15:31370137..31370148,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C58|description=CAGE_peak_at_chr15:31370137..31370148,-|id=chr15:31370137..31370148,-|ontology_enrichment_celltype=CL:0000148!3.13e-20!10;CL:0000541!3.13e-20!10;CL:0000147!3.07e-19!14;CL:0000710!8.26e-10!20;CL:0000075!1.81e-09!27;CL:0002567!1.76e-08!3;CL:0000325!3.96e-08!39;CL:0002566!3.73e-07!1|ontology_enrichment_celltype_v019=CL:0000148;1.87e-45;10!CL:0000147;1.09e-32;14!CL:0002566;2.73e-29;1!CL:0000710;4.32e-23;20!CL:0000075;2.88e-17;27!CL:0002077;1.10e-13;34!CL:0002567;1.04e-10;3!CL:0000149;1.76e-08;4|ontology_enrichment_celltype_v019_2=CL:0000148,1.98e-45,10;CL:0000541,1.98e-45,10;CL:0000147,1.14e-32,14;CL:0002566,2.37e-29,1;CL:0000710,4.44e-23,20;CL:0000075,2.94e-17,27;CL:0002077,8.03e-14,34;CL:0000333,4.89e-11,41;CL:0002567,1.20e-10,3;CL:0000149,1.70e-08,4;CL:0000133,6.51e-08,59|ontology_enrichment_development_v019=UBERON:0003056;7.07e-11;3|ontology_enrichment_disease=DOID:1909!3.35e-12!2|ontology_enrichment_disease_v019=DOID:1909;2.21e-15;2|ontology_enrichment_disease_v019_2=DOID:1909,1.78e-15,2|ontology_enrichment_uberon=UBERON:0005743!4.47e-16!86;UBERON:0001049!3.47e-15!57;UBERON:0005068!3.47e-15!57;UBERON:0006241!3.47e-15!57;UBERON:0007135!3.47e-15!57;UBERON:0003075!2.87e-14!86;UBERON:0007284!2.87e-14!86;UBERON:0000073!3.18e-14!94;UBERON:0001016!3.18e-14!94;UBERON:0002346!1.76e-13!90;UBERON:0001017!5.19e-13!82;UBERON:0002616!2.05e-12!59;UBERON:0001875!6.17e-12!2;UBERON:0006514!6.17e-12!2;UBERON:0000955!6.56e-12!69;UBERON:0006238!6.56e-12!69;UBERON:0002020!4.41e-11!34;UBERON:0003528!4.41e-11!34;UBERON:0002298!1.14e-10!8;UBERON:0003056!2.57e-10!61;UBERON:0000349!4.25e-10!5;UBERON:0002308!8.83e-10!9;UBERON:0000125!8.83e-10!9;UBERON:0002420!9.25e-10!9;UBERON:0007245!9.25e-10!9;UBERON:0010009!9.25e-10!9;UBERON:0010011!9.25e-10!9;UBERON:0000454!9.25e-10!9;UBERON:0004121!2.09e-09!169;UBERON:0001869!2.43e-09!32;UBERON:0000924!4.31e-09!173;UBERON:0006601!4.31e-09!173;UBERON:0002791!4.95e-09!33;UBERON:0002780!5.85e-09!41;UBERON:0001890!5.85e-09!41;UBERON:0006240!5.85e-09!41;UBERON:0000033!7.28e-09!123;UBERON:0001893!9.70e-09!34;UBERON:0003080!1.02e-08!42;UBERON:0003076!1.17e-08!15;UBERON:0003057!1.17e-08!15;UBERON:0000153!2.68e-08!129;UBERON:0007811!2.68e-08!129;UBERON:0000988!4.72e-08!3;UBERON:0001896!8.63e-08!3;UBERON:0005290!8.63e-08!3;UBERON:0010096!8.63e-08!3;UBERON:0009663!2.06e-07!7;UBERON:0004733!3.76e-07!12;UBERON:0002028!3.76e-07!12;UBERON:0007277!3.76e-07!12|ontology_enrichment_uberon_v019=UBERON:0000966;4.93e-07;5!UBERON:0005388;4.93e-07;5!UBERON:0001802;4.93e-07;5!UBERON:0002021;6.21e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.39e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58744735730423,0.381988425558278,1.17217447210047,0,0.822619941626588,3.60411669412701,2.85826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0.968440444553616,0,0.151649117541648,1.99825733481477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,3.14496794377288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_at_chr15:31370137..31370148,- | |||
|id=chr15:31370137..31370148,- | |||
|ontology_enrichment_celltype=CL:0000148!3.13e-20!10;CL:0000541!3.13e-20!10;CL:0000147!3.07e-19!14;CL:0000710!8.26e-10!20;CL:0000075!1.81e-09!27;CL:0002567!1.76e-08!3;CL:0000325!3.96e-08!39;CL:0002566!3.73e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.87e-45;10!CL:0000147;1.09e-32;14!CL:0002566;2.73e-29;1!CL:0000710;4.32e-23;20!CL:0000075;2.88e-17;27!CL:0002077;1.10e-13;34!CL:0002567;1.04e-10;3!CL:0000149;1.76e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.98e-45,10;CL:0000541,1.98e-45,10;CL:0000147,1.14e-32,14;CL:0002566,2.37e-29,1;CL:0000710,4.44e-23,20;CL:0000075,2.94e-17,27;CL:0002077,8.03e-14,34;CL:0000333,4.89e-11,41;CL:0002567,1.20e-10,3;CL:0000149,1.70e-08,4;CL:0000133,6.51e-08,59 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.07e-11;3 | |||
|ontology_enrichment_disease=DOID:1909!3.35e-12!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;2.21e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,1.78e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0005743!4.47e-16!86;UBERON:0001049!3.47e-15!57;UBERON:0005068!3.47e-15!57;UBERON:0006241!3.47e-15!57;UBERON:0007135!3.47e-15!57;UBERON:0003075!2.87e-14!86;UBERON:0007284!2.87e-14!86;UBERON:0000073!3.18e-14!94;UBERON:0001016!3.18e-14!94;UBERON:0002346!1.76e-13!90;UBERON:0001017!5.19e-13!82;UBERON:0002616!2.05e-12!59;UBERON:0001875!6.17e-12!2;UBERON:0006514!6.17e-12!2;UBERON:0000955!6.56e-12!69;UBERON:0006238!6.56e-12!69;UBERON:0002020!4.41e-11!34;UBERON:0003528!4.41e-11!34;UBERON:0002298!1.14e-10!8;UBERON:0003056!2.57e-10!61;UBERON:0000349!4.25e-10!5;UBERON:0002308!8.83e-10!9;UBERON:0000125!8.83e-10!9;UBERON:0002420!9.25e-10!9;UBERON:0007245!9.25e-10!9;UBERON:0010009!9.25e-10!9;UBERON:0010011!9.25e-10!9;UBERON:0000454!9.25e-10!9;UBERON:0004121!2.09e-09!169;UBERON:0001869!2.43e-09!32;UBERON:0000924!4.31e-09!173;UBERON:0006601!4.31e-09!173;UBERON:0002791!4.95e-09!33;UBERON:0002780!5.85e-09!41;UBERON:0001890!5.85e-09!41;UBERON:0006240!5.85e-09!41;UBERON:0000033!7.28e-09!123;UBERON:0001893!9.70e-09!34;UBERON:0003080!1.02e-08!42;UBERON:0003076!1.17e-08!15;UBERON:0003057!1.17e-08!15;UBERON:0000153!2.68e-08!129;UBERON:0007811!2.68e-08!129;UBERON:0000988!4.72e-08!3;UBERON:0001896!8.63e-08!3;UBERON:0005290!8.63e-08!3;UBERON:0010096!8.63e-08!3;UBERON:0009663!2.06e-07!7;UBERON:0004733!3.76e-07!12;UBERON:0002028!3.76e-07!12;UBERON:0007277!3.76e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.93e-07;5!UBERON:0005388;4.93e-07;5!UBERON:0001802;4.93e-07;5!UBERON:0002021;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,6.39e-07,5 | |||
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|short_description=p@chr15:31370137..31370148,- | |||
}} |
Revision as of 06:32, 11 September 2013
Short description: | p@chr15:31370137..31370148, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:31370137..31370148, - |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.98e-45 | 10 |
melanoblast | 1.98e-45 | 10 |
pigment cell | 1.14e-32 | 14 |
dark melanocyte | 2.37e-29 | 1 |
neurecto-epithelial cell | 4.44e-23 | 20 |
columnar/cuboidal epithelial cell | 2.94e-17 | 27 |
ecto-epithelial cell | 8.03e-14 | 34 |
migratory neural crest cell | 4.89e-11 | 41 |
light melanocyte | 1.20e-10 | 3 |
visual pigment cell | 1.70e-08 | 4 |
neurectodermal cell | 6.51e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
melanoma | 1.78e-15 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.