FFCP PHASE1:Hg19::chr16:223701..223712,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=-82bp_to_DQ655927_5end|coexpression_cluster_id=C14|description=CAGE_peak_3_at_DQ655927_5end|id=chr16:223701..223712,-|ontology_enrichment_celltype=CL:0000764!4.00e-16!2;CL:0000765!4.00e-16!2;CL:0000050!4.00e-16!2;CL:0000038!4.00e-16!2;CL:0000558!4.00e-16!2;CL:0000547!4.00e-16!2;CL:0000549!4.00e-16!2;CL:0000550!4.00e-16!2;CL:0000552!4.00e-16!2|ontology_enrichment_celltype_v019=CL:0000764;2.48e-33;2!CL:0000558;2.48e-33;2|ontology_enrichment_celltype_v019_2=CL:0000764,2.29e-33,2;CL:0000765,2.29e-33,2;CL:0000050,2.29e-33,2;CL:0000038,2.29e-33,2;CL:0000558,2.29e-33,2;CL:0000547,2.29e-33,2;CL:0000549,2.29e-33,2;CL:0000550,2.29e-33,2;CL:0000552,2.29e-33,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000178!3.04e-40!15;UBERON:0000179!3.04e-40!15;UBERON:0000463!3.04e-40!15;UBERON:0007023!6.73e-20!115;UBERON:0002084!7.75e-09!1;UBERON:0002082!7.75e-09!1;UBERON:0004706!7.75e-09!1;UBERON:0007029!9.74e-09!1;UBERON:0001154!1.22e-08!1;UBERON:0001153!1.22e-08!1;UBERON:0002390!1.92e-08!102;UBERON:0003061!1.92e-08!102;UBERON:0007190!2.06e-08!1;UBERON:0002193!1.66e-07!112|ontology_enrichment_uberon_v019=UBERON:0000178;1.86e-88;15!UBERON:0000179;1.86e-88;15!UBERON:0000463;1.86e-88;15!UBERON:0002390;1.06e-37;32!UBERON:0002193;6.14e-21;42|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.96e-88,15;UBERON:0000179,1.96e-88,15;UBERON:0000463,1.96e-88,15;UBERON:0007023,9.57e-17,114;UBERON:0002390,6.18e-13,98;UBERON:0003061,6.18e-13,98;UBERON:0004535,1.11e-11,109;UBERON:0002193,1.11e-11,108;UBERON:0001009,2.38e-11,112|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,5.49014447152291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.64150457541122,16.8220185571323,35.3181256047981,15.7232971802141,18.9226645619649,6.48473311192717,5.40031437238115,56.3118875168932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,19.1586473877552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@DQ655927}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-82bp_to_DQ655927_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_3_at_DQ655927_5end | |||
|id=chr16:223701..223712,- | |||
|ontology_enrichment_celltype=CL:0000764!4.00e-16!2;CL:0000765!4.00e-16!2;CL:0000050!4.00e-16!2;CL:0000038!4.00e-16!2;CL:0000558!4.00e-16!2;CL:0000547!4.00e-16!2;CL:0000549!4.00e-16!2;CL:0000550!4.00e-16!2;CL:0000552!4.00e-16!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.48e-33;2!CL:0000558;2.48e-33;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.29e-33,2;CL:0000765,2.29e-33,2;CL:0000050,2.29e-33,2;CL:0000038,2.29e-33,2;CL:0000558,2.29e-33,2;CL:0000547,2.29e-33,2;CL:0000549,2.29e-33,2;CL:0000550,2.29e-33,2;CL:0000552,2.29e-33,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.04e-40!15;UBERON:0000179!3.04e-40!15;UBERON:0000463!3.04e-40!15;UBERON:0007023!6.73e-20!115;UBERON:0002084!7.75e-09!1;UBERON:0002082!7.75e-09!1;UBERON:0004706!7.75e-09!1;UBERON:0007029!9.74e-09!1;UBERON:0001154!1.22e-08!1;UBERON:0001153!1.22e-08!1;UBERON:0002390!1.92e-08!102;UBERON:0003061!1.92e-08!102;UBERON:0007190!2.06e-08!1;UBERON:0002193!1.66e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.86e-88;15!UBERON:0000179;1.86e-88;15!UBERON:0000463;1.86e-88;15!UBERON:0002390;1.06e-37;32!UBERON:0002193;6.14e-21;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.96e-88,15;UBERON:0000179,1.96e-88,15;UBERON:0000463,1.96e-88,15;UBERON:0007023,9.57e-17,114;UBERON:0002390,6.18e-13,98;UBERON:0003061,6.18e-13,98;UBERON:0004535,1.11e-11,109;UBERON:0002193,1.11e-11,108;UBERON:0001009,2.38e-11,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31555925987561,5.49014447152291,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.64150457541122,16.8220185571323,35.3181256047981,15.7232971802141,18.9226645619649,6.48473311192717,5.40031437238115,56.3118875168932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,19.1586473877552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515663103788617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@DQ655927 | |||
}} |
Revision as of 09:41, 11 September 2013
Short description: | p3@DQ655927 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DQ655927_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -82bp_to_DQ655927_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.29e-33 | 2 |
erythroblast | 2.29e-33 | 2 |
megakaryocyte-erythroid progenitor cell | 2.29e-33 | 2 |
erythroid progenitor cell | 2.29e-33 | 2 |
reticulocyte | 2.29e-33 | 2 |
proerythroblast | 2.29e-33 | 2 |
basophilic erythroblast | 2.29e-33 | 2 |
polychromatophilic erythroblast | 2.29e-33 | 2 |
orthochromatic erythroblast | 2.29e-33 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.96e-88 | 15 |
haemolymphatic fluid | 1.96e-88 | 15 |
organism substance | 1.96e-88 | 15 |
adult organism | 9.57e-17 | 114 |
hematopoietic system | 6.18e-13 | 98 |
blood island | 6.18e-13 | 98 |
cardiovascular system | 1.11e-11 | 109 |
hemolymphoid system | 1.11e-11 | 108 |
circulatory system | 2.38e-11 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.