FFCP PHASE1:Hg19::chr17:73839880..73839915,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:73839880..73839915,+|id=chr17:73839880..73839915,+|ontology_enrichment_celltype=CL:0000988!4.97e-32!182;CL:0002031!6.61e-32!124;CL:0000738!1.86e-31!140;CL:0000037!2.20e-31!172;CL:0000566!2.20e-31!172;CL:0002032!7.79e-30!165;CL:0000837!7.79e-30!165;CL:0002087!1.17e-27!119;CL:0000860!3.33e-19!45;CL:0000839!3.45e-19!70;CL:0000766!2.86e-18!76;CL:0000763!1.44e-16!112;CL:0000049!1.44e-16!112;CL:0002057!1.45e-16!42;CL:0000557!5.77e-16!71;CL:0002194!1.68e-13!63;CL:0000576!1.68e-13!63;CL:0000040!1.68e-13!63;CL:0000559!1.68e-13!63;CL:0000838!3.27e-13!52;CL:0002009!7.62e-13!65;CL:0000542!7.91e-13!53;CL:0000051!7.91e-13!53;CL:0002393!6.93e-09!9;CL:0002397!6.93e-09!9;CL:0000080!8.30e-07!6|ontology_enrichment_celltype_v019=CL:0000097;2.33e-15;5!CL:0000771;1.43e-10;2!CL:0000764;2.48e-10;2!CL:0000558;2.48e-10;2!CL:0000094;4.41e-10;8!CL:0000163;5.86e-09;9!CL:0000081;1.42e-07;11!CL:0000767;2.63e-07;3!CL:0000623;2.63e-07;3|ontology_enrichment_celltype_v019_2=CL:0000097,2.02e-15,5;CL:0002028,2.02e-15,5;CL:0000771,1.43e-10,2;CL:0000764,1.89e-10,2;CL:0000765,1.89e-10,2;CL:0000050,1.89e-10,2;CL:0000038,1.89e-10,2;CL:0000558,1.89e-10,2;CL:0000547,1.89e-10,2;CL:0000549,1.89e-10,2;CL:0000550,1.89e-10,2;CL:0000552,1.89e-10,2;CL:0000094,4.62e-10,8;CL:0000163,5.42e-09,9;CL:0000081,1.46e-07,11;CL:0000767,2.79e-07,3;CL:0000623,3.35e-07,3;CL:0000825,3.35e-07,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.28e-25!102;UBERON:0003061!1.28e-25!102;UBERON:0002193!4.47e-23!112;UBERON:0002371!3.89e-13!80;UBERON:0000178!3.62e-12!15;UBERON:0000179!3.62e-12!15;UBERON:0000463!3.62e-12!15;UBERON:0001474!1.34e-11!86;UBERON:0002405!9.96e-11!115;UBERON:0004765!1.29e-08!101;UBERON:0001434!1.29e-08!101;UBERON:0003081!3.11e-07!216|ontology_enrichment_uberon_v019=UBERON:0002370;2.48e-10;2!UBERON:0005058;2.48e-10;2!UBERON:0009113;2.48e-10;2|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.492603536699674,0.472264687882075,1.18009283054671,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0.32389366601898,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.845021145247767,0.425208599930087,0.419317291016752,0,0.150176892841506,0.64290234678832,0.285012743741249,0.39783335439818,0.365328307529268,0,0.546138611262131,0.889509253863555,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0.205601498999509,0.334372990781356,0,0.946895611469467,0,0.334231370655521,0.883817722424512,0.221533894583621,0.541607727530031,0.640456598628376,0.130059347559878,0.328875809207352,0,0.289803085735052,0.14828656316206,0,2.09071047609954,0.679856056185397,0.383220493601921,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0,0.511946444617674,1.24930726552346,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0.528290604079356,1.24396869324463,1.29707958075265,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0.411362273086194,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0.540911356951966,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.980312671588698,0.839107934879214,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.61781969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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:73839880..73839915,+ | |||
|id=chr17:73839880..73839915,+ | |||
|ontology_enrichment_celltype=CL:0000988!4.97e-32!182;CL:0002031!6.61e-32!124;CL:0000738!1.86e-31!140;CL:0000037!2.20e-31!172;CL:0000566!2.20e-31!172;CL:0002032!7.79e-30!165;CL:0000837!7.79e-30!165;CL:0002087!1.17e-27!119;CL:0000860!3.33e-19!45;CL:0000839!3.45e-19!70;CL:0000766!2.86e-18!76;CL:0000763!1.44e-16!112;CL:0000049!1.44e-16!112;CL:0002057!1.45e-16!42;CL:0000557!5.77e-16!71;CL:0002194!1.68e-13!63;CL:0000576!1.68e-13!63;CL:0000040!1.68e-13!63;CL:0000559!1.68e-13!63;CL:0000838!3.27e-13!52;CL:0002009!7.62e-13!65;CL:0000542!7.91e-13!53;CL:0000051!7.91e-13!53;CL:0002393!6.93e-09!9;CL:0002397!6.93e-09!9;CL:0000080!8.30e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.33e-15;5!CL:0000771;1.43e-10;2!CL:0000764;2.48e-10;2!CL:0000558;2.48e-10;2!CL:0000094;4.41e-10;8!CL:0000163;5.86e-09;9!CL:0000081;1.42e-07;11!CL:0000767;2.63e-07;3!CL:0000623;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.02e-15,5;CL:0002028,2.02e-15,5;CL:0000771,1.43e-10,2;CL:0000764,1.89e-10,2;CL:0000765,1.89e-10,2;CL:0000050,1.89e-10,2;CL:0000038,1.89e-10,2;CL:0000558,1.89e-10,2;CL:0000547,1.89e-10,2;CL:0000549,1.89e-10,2;CL:0000550,1.89e-10,2;CL:0000552,1.89e-10,2;CL:0000094,4.62e-10,8;CL:0000163,5.42e-09,9;CL:0000081,1.46e-07,11;CL:0000767,2.79e-07,3;CL:0000623,3.35e-07,3;CL:0000825,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.28e-25!102;UBERON:0003061!1.28e-25!102;UBERON:0002193!4.47e-23!112;UBERON:0002371!3.89e-13!80;UBERON:0000178!3.62e-12!15;UBERON:0000179!3.62e-12!15;UBERON:0000463!3.62e-12!15;UBERON:0001474!1.34e-11!86;UBERON:0002405!9.96e-11!115;UBERON:0004765!1.29e-08!101;UBERON:0001434!1.29e-08!101;UBERON:0003081!3.11e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.48e-10;2!UBERON:0005058;2.48e-10;2!UBERON:0009113;2.48e-10;2 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382067028739756,0.492603536699674,0.472264687882075,1.18009283054671,0.383829398097213,0,0,0,0,0,0.142169232487422,0,0.553995408531877,0,0,0,0.32389366601898,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0,0.309706370895104,0.28769239232215,0,0,0,0,0,0.941211697713023,0.272906150057846,0.224723484445085,0,0.320929027076094,0,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.845021145247767,0.425208599930087,0.419317291016752,0,0.150176892841506,0.64290234678832,0.285012743741249,0.39783335439818,0.365328307529268,0,0.546138611262131,0.889509253863555,0,0,0,0,0.954053754535364,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0.205601498999509,0.334372990781356,0,0.946895611469467,0,0.334231370655521,0.883817722424512,0.221533894583621,0.541607727530031,0.640456598628376,0.130059347559878,0.328875809207352,0,0.289803085735052,0.14828656316206,0,2.09071047609954,0.679856056185397,0.383220493601921,0.68725489096526,0.759059076058509,0.318565414324097,0,0,0,0.511946444617674,1.24930726552346,0.236777252044017,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,1.53316637465883,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0.474541238222193,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0.528290604079356,1.24396869324463,1.29707958075265,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,1.07813787429759,0.385029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,1.3071772551245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0.411362273086194,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0.540911356951966,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0.980312671588698,0.839107934879214,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0.296521128680622,0.617819694732514,0.208843899010911,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394308725006267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0.281951753939561,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.322944549180031,1.11734485732544,0,0,0,0,0.342233301085281,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |||
|short_description=p@chr17:73839880..73839915,+ | |||
}} |
Revision as of 15:42, 11 September 2013
Short description: | p@chr17:73839880..73839915, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:73839880..73839915, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.02e-15 | 5 |
basophil mast progenitor cell | 2.02e-15 | 5 |
eosinophil | 1.43e-10 | 2 |
erythroid lineage cell | 1.89e-10 | 2 |
erythroblast | 1.89e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 1.89e-10 | 2 |
erythroid progenitor cell | 1.89e-10 | 2 |
reticulocyte | 1.89e-10 | 2 |
proerythroblast | 1.89e-10 | 2 |
basophilic erythroblast | 1.89e-10 | 2 |
polychromatophilic erythroblast | 1.89e-10 | 2 |
orthochromatic erythroblast | 1.89e-10 | 2 |
granulocyte | 4.62e-10 | 8 |
endocrine cell | 5.42e-09 | 9 |
blood cell | 1.46e-07 | 11 |
basophil | 2.79e-07 | 3 |
natural killer cell | 3.35e-07 | 3 |
pro-NK cell | 3.35e-07 | 3 |
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