FFCP PHASE1:Hg19::chr18:3447617..3447633,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7050|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11776|TSSclassifier=S|UniProt=F8VZB6,Q15583|association_with_transcript=9bp_to_NM_173207,uc002klv.2_5end|description=CAGE_peak_20_at_TGIF1_5end|id=chr18:3447617..3447633,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000039;1.81e-09;7!CL:0000586;1.81e-09;7|ontology_enrichment_celltype_v019_2=CL:0000039,7.50e-10,7;CL:0000586,7.50e-10,7|ontology_enrichment_development_v019=UBERON:0009117;7.55e-10;10!UBERON:0005564;7.55e-10;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,6.16e-07,106|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0000991;1.88e-08;21!UBERON:0000473;2.75e-08;8|ontology_enrichment_uberon_v019_2=UBERON:0000991,9.80e-09,21;UBERON:0009196,9.80e-09,21;UBERON:0009117,9.80e-09,21;UBERON:0005564,9.80e-09,21;UBERON:0000473,1.28e-08,8;UBERON:0004176,2.73e-08,22|phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,0,0,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0.975865597581014,0.492484232307152,0.408001382488506,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0.641858054152187,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.654895377488563,0,0,0,0,0.132957960518865,0,0.571994910780128,0.371457501329565,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0,0,0.516833518338658,0,0.33472061276467,0,0,0.488124115096339,0,0.81014194788176,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0.926864265692532,1.43418310374407,0,0,0,0.24666754841716,0,0.269421344139376,0,0.302714855289863,0,0.70296429550139,0.936480230490962,0,0.298897361103602,0.23486899728753,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0.45071417671979,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0.484938170456436,0,0,0,0,0,0.286804595389004,1.09776335516636,0.662648841607426,0.580969714347592,0.829288440122964,0.756962552626885,1.82488679537915,0,0.643240938192885,0,0,0,1.30137480043828,0.337169380156203,0.964044119533928,0.661763836394364,0,0.474541238222193,0.134831308160164,0,0.38474715694639,2.21446636387394,0,0.4115740113314,0,0,0,1.18157981336281,0,0.491953754172454,0.514703430895577,0.219500570817251,0,0.201057944823262,0.277765335475589,0.325808305310325,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0,0.358234090811393,0.871901815541886,0.383382679165211,0.492663237895943,0.088048434013226,1.03664057770386,1.29707958075265,0.37872730027914,1.0159663086747,1.14596527667483,2.34434894420094,0,0.514137463516618,0,0.285826432630578,0.336393253036082,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0.710783897485092,0,0.602878754119172,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0.585707074963566,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0,0.248107807818777,0.460385919864187,0,0.512556597022804,1.02341449813341,0.482561763430822,0,0.308419387605311,0.710246901252508,0.328508624055237,2.07701771673448,0.697262270759755,0.362578348774867,0,0.276242966807689,0.34444334449382,0.182091168006717,0.524497659837696,0.902399225814824,0.0770153371044148,0.784349769176855,0,0.527758144464379,0,0.340187410553031,0.431831832204279,0,0,0,0.254876273045038,0,0.223874754722178,1.31555925987561,0.784306353074702,0.769350375349168,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,0.48335359146061,0.770243085573222,0.15350367472613,0.827019434907183,0.537101224341368,0.435050081742686,0.596586391912706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03484,0.202117188958219,0,0,0.0673520530145875,0.286888821570705,1.99596213927608,0.325613074443898,0.320182037633146,0,0.0898252021065869,0,0.855690109280065,0,0,0.201273793591026,0|short_description=p20@TGIF1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7050 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |||
|TSSclassifier=S | |||
|UniProt=F8VZB6,Q15583 | |||
|association_with_transcript=9bp_to_NM_173207,uc002klv.2_5end | |||
|description=CAGE_peak_20_at_TGIF1_5end | |||
|id=chr18:3447617..3447633,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.81e-09;7!CL:0000586;1.81e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,7.50e-10,7;CL:0000586,7.50e-10,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.55e-10;10!UBERON:0005564;7.55e-10;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.16e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000991;1.88e-08;21!UBERON:0000473;2.75e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,9.80e-09,21;UBERON:0009196,9.80e-09,21;UBERON:0009117,9.80e-09,21;UBERON:0005564,9.80e-09,21;UBERON:0000473,1.28e-08,8;UBERON:0004176,2.73e-08,22 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.704772020479856,0,0,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0.123766352960047,0.662794751455832,0,0,0,0.975865597581014,0.492484232307152,0.408001382488506,0,0.572471974262113,0.136874425072884,0.125542639594803,0,0,0.0787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0.553995408531877,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0,0.689491361473237,0,0,0,0,0,0,0.641858054152187,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.02290049474824,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.654895377488563,0,0,0,0,0.132957960518865,0,0.571994910780128,0.371457501329565,0.596287222100115,0,0.347140501607594,0,0.419499436209906,0,0,0.516833518338658,0,0.33472061276467,0,0,0.488124115096339,0,0.81014194788176,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0.926864265692532,1.43418310374407,0,0,0,0.24666754841716,0,0.269421344139376,0,0.302714855289863,0,0.70296429550139,0.936480230490962,0,0.298897361103602,0.23486899728753,0,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0.277064115484183,0.438977620880838,0.30648779579902,0.45071417671979,0.113432183160021,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0.506328996723799,0.0974370051611986,0.252433774244115,0.0920498986422993,0.484938170456436,0,0,0,0,0,0.286804595389004,1.09776335516636,0.662648841607426,0.580969714347592,0.829288440122964,0.756962552626885,1.82488679537915,0,0.643240938192885,0,0,0,1.30137480043828,0.337169380156203,0.964044119533928,0.661763836394364,0,0.474541238222193,0.134831308160164,0,0.38474715694639,2.21446636387394,0,0.4115740113314,0,0,0,1.18157981336281,0,0.491953754172454,0.514703430895577,0.219500570817251,0,0.201057944823262,0.277765335475589,0.325808305310325,0,0,0.231860809950154,0,0.144366447761074,0.462985512576611,0,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0,0,0.16798212819886,0,0.358234090811393,0.871901815541886,0.383382679165211,0.492663237895943,0.088048434013226,1.03664057770386,1.29707958075265,0.37872730027914,1.0159663086747,1.14596527667483,2.34434894420094,0,0.514137463516618,0,0.285826432630578,0.336393253036082,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0.26593811658487,1.04007436911366,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0.823240336780769,0,0.710783897485092,0,0.602878754119172,0,0.299918973546171,0,0,0,0.479249710983165,0,0,0.144781306667579,0.410952645100767,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0.637938751653163,0,0,0,0.24538298343828,0,0.271265023699736,0.207970861530807,0.356857977594324,0,0.585707074963566,0.300946099727719,0,0,0,0.368738337083406,0.347534457872331,0.195801157462741,0.343143423810856,0,0.215714200818617,0,0,0,0,0.248107807818777,0.460385919864187,0,0.512556597022804,1.02341449813341,0.482561763430822,0,0.308419387605311,0.710246901252508,0.328508624055237,2.07701771673448,0.697262270759755,0.362578348774867,0,0.276242966807689,0.34444334449382,0.182091168006717,0.524497659837696,0.902399225814824,0.0770153371044148,0.784349769176855,0,0.527758144464379,0,0.340187410553031,0.431831832204279,0,0,0,0.254876273045038,0,0.223874754722178,1.31555925987561,0.784306353074702,0.769350375349168,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.247528499761764,0.574265537996172,0,0,0.48335359146061,0.770243085573222,0.15350367472613,0.827019434907183,0.537101224341368,0.435050081742686,0.596586391912706,0.445160178233687,0,0,0.127612712494584,0.10115778085555,0,0,0,0.924100740528266,0,0,0.18532421910392,0.572499546967965,0.372158369359667,0.949138274156178,0.190630193923825,0.511795582622668,0,0.318203247925937,0.78494864019923,0.359744915166629,1.09814811894422,0.117812402345686,0,0,0,0.975267478179181,0.243713489631284,1.05650146756755,0.272999822815972,0.424216295861138,0,0,0.66343897524122,0,0,0.655894752046633,0.202910376962704,0,0,0.860468113224309,0.0982490410131212,0,0.354761064070598,0.844430541190656,0.329294892959902,0,0,0.192444225451024,0,2.17781969722645,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0.185803175125719,0.432807638929335,0,0,0,0.957526850661834,0.211673582723883,1.29848776109822,0,0,0.156679895773023,0,0.50787533340481,0,0.201799707191048,0,0,0,0,0.166849141711909,0,0,1.23087398947712,0.811367035427949,0,0,0,0.146508179271894,0.36408156524854,0,0,0,0.890894042497916,0,0,0,0,0.988823245360557,0.6333762243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| |||
|short_description=p20@TGIF1 | |||
}} |
Revision as of 17:22, 11 September 2013
Short description: | p20@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_TGIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_NM_173207, uc002klv.2_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | F8VZB6Q15583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.50e-10 | 7 |
germ cell | 7.50e-10 | 7 |
Ontology term | p-value | n |
---|---|---|
gonad | 9.80e-09 | 21 |
indifferent external genitalia | 9.80e-09 | 21 |
indifferent gonad | 9.80e-09 | 21 |
gonad primordium | 9.80e-09 | 21 |
testis | 1.28e-08 | 8 |
external genitalia | 2.73e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.16e-07 | 106 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.