FFCP PHASE1:Hg19::chr18:5540365..5540373,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=23136|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=3380|TSSclassifier=W|UniProt=Q9Y2J2,F5GX05|association_with_transcript=181bp_to_ENST00000342933,ENST00000400111,ENST00000544123,uc010wzh.1_5end|coexpression_cluster_id=C137|description=CAGE_peak_22_at_EPB41L3_5end|id=chr18:5540365..5540373,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007123;1.71e-14;5!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3112;3.34e-66;1!DOID:4556;2.62e-23;3!DOID:3908;1.40e-14;5!DOID:3905;1.04e-08;9|ontology_enrichment_disease_v019_2=DOID:3112,2.39e-66,1;DOID:4556,2.62e-23,3;DOID:3908,1.40e-14,5;DOID:3905,1.04e-08,9|ontology_enrichment_uberon=UBERON:0000988!9.68e-12!3;UBERON:0007023!2.25e-10!115;UBERON:0002148!1.13e-08!2;UBERON:0009662!1.13e-08!2;UBERON:0002298!1.73e-07!8|ontology_enrichment_uberon_v019=UBERON:0002046;1.71e-14;5!UBERON:0000473;1.41e-09;8!UBERON:0003135;2.55e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.60e-14,5;UBERON:0004117,1.60e-14,5;UBERON:0007689,1.60e-14,5;UBERON:0007123,1.60e-14,5;UBERON:0003091,1.60e-14,5;UBERON:0000473,1.47e-09,8;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11;UBERON:0003135,2.63e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0.794858446811959,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.211200673038813,6.63363155531526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0.803892390468535,0,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0|short_description=p22@EPB41L3}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=23136 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3380 | |||
|TSSclassifier=W | |||
|UniProt=Q9Y2J2,F5GX05 | |||
|association_with_transcript=181bp_to_ENST00000342933,ENST00000400111,ENST00000544123,uc010wzh.1_5end | |||
|coexpression_cluster_id=C137 | |||
|description=CAGE_peak_22_at_EPB41L3_5end | |||
|id=chr18:5540365..5540373,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.71e-14;5!UBERON:0009117;6.34e-08;10!UBERON:0005564;6.34e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;3.34e-66;1!DOID:4556;2.62e-23;3!DOID:3908;1.40e-14;5!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,2.39e-66,1;DOID:4556,2.62e-23,3;DOID:3908,1.40e-14,5;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0000988!9.68e-12!3;UBERON:0007023!2.25e-10!115;UBERON:0002148!1.13e-08!2;UBERON:0009662!1.13e-08!2;UBERON:0002298!1.73e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0002046;1.71e-14;5!UBERON:0000473;1.41e-09;8!UBERON:0003135;2.55e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,1.60e-14,5;UBERON:0004117,1.60e-14,5;UBERON:0007689,1.60e-14,5;UBERON:0007123,1.60e-14,5;UBERON:0003091,1.60e-14,5;UBERON:0000473,1.47e-09,8;UBERON:0009722,2.47e-07,11;UBERON:0007690,2.47e-07,11;UBERON:0003135,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0.639337125799041,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0.31593289814244,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411125773940253,0.794858446811959,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.211200673038813,6.63363155531526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.13223260174269,0,0,0.213574825135389,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0.886068179966986,0.244052529803926,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159633859057151,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31017534008077,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0.803892390468535,0,0,0,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p22@EPB41L3 | |||
}} |
Revision as of 17:49, 11 September 2013
Short description: | p22@EPB41L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_EPB41L3_5end |
Coexpression cluster: | C137_large_ductal_melanoma_cervical_Endothelial_Smooth_chronic |
Association with transcript: | 181bp_to_ENST00000342933, ENST00000400111, ENST00000544123, uc010wzh.1_5end |
EntrezGene: | EPB41L3 |
HGNC: | 3380 |
UniProt: | Q9Y2J2F5GX05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 1.60e-14 | 5 |
pharyngeal pouch | 1.60e-14 | 5 |
thyroid diverticulum | 1.60e-14 | 5 |
pharyngeal pouch 2 | 1.60e-14 | 5 |
thyroid primordium | 1.60e-14 | 5 |
testis | 1.47e-09 | 8 |
entire pharyngeal arch endoderm | 2.47e-07 | 11 |
early pharyngeal endoderm | 2.47e-07 | 11 |
male reproductive organ | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 2.39e-66 | 1 |
lung large cell carcinoma | 2.62e-23 | 3 |
non-small cell lung carcinoma | 1.40e-14 | 5 |
lung carcinoma | 1.04e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.