FFCP PHASE1:Hg19::chr19:19257943..19257954,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C78|description=CAGE_peak_at_chr19:19257943..19257954,-|id=chr19:19257943..19257954,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000785;2.39e-66;1!CL:0000819;2.39e-66;1!CL:0000945;3.75e-12;24|ontology_enrichment_celltype_v019_2=CL:0000819,2.39e-66,1;CL:0000785,5.04e-34,2;CL:0000955,5.04e-34,2;CL:0000818,5.04e-34,2;CL:0000954,5.04e-34,2;CL:0000816,5.04e-34,2;CL:0000817,3.27e-23,3;CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24|ontology_enrichment_development_v019=CL:0000954;5.04e-34;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060073;2.39e-66;1!DOID:8675;2.39e-66;1!DOID:0060058;2.08e-27;10|ontology_enrichment_disease_v019_2=DOID:0060073,2.39e-66,1;DOID:8675,2.39e-66,1;DOID:0060058,2.08e-27,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.697204805222715,0.426507697462265,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.687010689511529,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37191225980366,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0.19980960958213,0,0,0.514784993585894,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77557054980777,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0.861074898304078,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:19257943..19257954,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_at_chr19:19257943..19257954,- | |||
|id=chr19:19257943..19257954,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000785;2.39e-66;1!CL:0000819;2.39e-66;1!CL:0000945;3.75e-12;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000819,2.39e-66,1;CL:0000785,5.04e-34,2;CL:0000955,5.04e-34,2;CL:0000818,5.04e-34,2;CL:0000954,5.04e-34,2;CL:0000816,5.04e-34,2;CL:0000817,3.27e-23,3;CL:0000945,3.75e-12,24;CL:0000826,3.75e-12,24 | |||
|ontology_enrichment_development_v019=CL:0000954;5.04e-34;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;2.39e-66;1!DOID:8675;2.39e-66;1!DOID:0060058;2.08e-27;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,2.39e-66,1;DOID:8675,2.39e-66,1;DOID:0060058,2.08e-27,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.697204805222715,0.426507697462265,0,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0.192190067365106,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0,0,0,0,0,0,0,0.245040215981032,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0.687010689511529,0.307240764308458,0,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.37191225980366,0,0,0,0,0.30607276163049,0.063186579628488,0.150323419414493,0.103688191397247,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0,0,0,0.0967563312890851,0.0730893170861856,0,0,0,0,0,0.19871461170299,0,0,0,0.213452994739353,0.19980960958213,0,0,0.514784993585894,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0,0,0,0,0,0,0,0.164831716762333,0,0,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77557054980777,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0.194860308839388,0,0,0.327609848846413,0,0,0,0,0.861074898304078,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0.49131575253029,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0.955538938977433,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0.940634592723046,0,0,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,0,0.462175628631418,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:19257943..19257954,- | |||
}} |
Revision as of 19:35, 11 September 2013
Short description: | p@chr19:19257943..19257954, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:19257943..19257954, - |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B-1 B cell | 2.39e-66 | 1 |
mature B cell | 5.04e-34 | 2 |
pre-B-II cell | 5.04e-34 | 2 |
transitional stage B cell | 5.04e-34 | 2 |
small pre-B-II cell | 5.04e-34 | 2 |
immature B cell | 5.04e-34 | 2 |
precursor B cell | 3.27e-23 | 3 |
lymphocyte of B lineage | 3.75e-12 | 24 |
pro-B cell | 3.75e-12 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 2.39e-66 | 1 |
lymphosarcoma | 2.39e-66 | 1 |
lymphoma | 2.08e-27 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.