FFCP PHASE1:Hg19::chr19:36004543..36004557,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=93099|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25063|TSSclassifier=S|UniProt=Q6E0U4|association_with_transcript=0bp_to_ENST00000339686_5end|coexpression_cluster_id=C202|description=CAGE_peak_3_at_DMKN_5end|id=chr19:36004543..36004557,-|ontology_enrichment_celltype=CL:0002076!4.95e-09!43;CL:0000066!5.37e-07!254|ontology_enrichment_celltype_v019=CL:0002159;2.70e-08;14!CL:0000154;4.87e-08;6!CL:0002077;7.98e-08;34!CL:0000622;1.50e-07;5!CL:0002368;2.57e-07;13!CL:0002076;2.89e-07;42!CL:0000362;3.65e-07;9|ontology_enrichment_celltype_v019_2=CL:0002076,5.03e-09,42;CL:0002159,2.16e-08,14;CL:0002077,2.42e-08,34;CL:0000154,4.22e-08,6;CL:0000622,1.46e-07,5;CL:0002368,2.51e-07,13;CL:0000362,3.52e-07,9|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!5.83e-12!365;UBERON:0003102!9.74e-12!95;UBERON:0004119!4.73e-10!169;UBERON:0000925!4.73e-10!169;UBERON:0006595!4.73e-10!169;UBERON:0000468!3.78e-09!659;UBERON:0000486!1.28e-08!82;UBERON:0001004!3.19e-08!72;UBERON:0000161!4.30e-08!35;UBERON:0002100!1.79e-07!216;UBERON:0004923!4.04e-07!57|ontology_enrichment_uberon_v019=UBERON:0000486;6.52e-11;12!UBERON:0007196;9.21e-08;15!UBERON:0001558;9.21e-08;15!UBERON:0005910;1.43e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.23e-08,83;UBERON:0004119,2.34e-08,160;UBERON:0000925,2.34e-08,160;UBERON:0006595,2.34e-08,160;UBERON:0003102,9.08e-08,99;UBERON:0001004,9.37e-08,74;UBERON:0007196,9.56e-08,15;UBERON:0001558,9.56e-08,15;UBERON:0005910,1.55e-07,6|phase1_expression=6.54042165374004,29.5458722969557,6.62485699251064,0,2.23480547213644,0,2.53299878168311,6.31719873426831,1.04474251279935,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.43594857135249,4.819294700452,3.69754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.44859552370032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,7.37770945674,0.383587685530591,0,0,1.59331170856906,0,0,0.189069634328136,0,0,0.327447688744282,48.0869780546156,104.931997307994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,39.6845587449706,0.993943903390637,0.25326102332916,0.662045904066094,2.29469296599051,0.354668382198357,0,0,0,6.53543174339509,0.269421344139376,0.326923806226917,0.151357427644931,0,0,2.80944069147288,1.71141546463335,8.36912611090086,0.352303495931295,0.161872944368132,0,0,0.122834317311768,0.723280468230358,0,0.989067717114227,1.82032272387605,2.87447256726495,0,0,0.554128230968366,0,0.30648779579902,1.80285670687916,0,0,0.427114777637135,3.60284231971255,1.20036438433761,0.515262646192195,0.257640540045629,0.37223371266318,0,0.0974370051611986,0.252433774244115,0.460249493211497,0,0,0,0.508681776931463,8.69673839234836,3.54569956768085,1.72082757233402,0.609868530647977,0.132529768321485,2.5562667431294,2.48786532036889,4.03713361401005,0.36497735907583,0,0,0,7.42988684851167,23.8220228950963,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0.71181185733329,0.404493924480493,0,0.38474715694639,0,0,2.057870056657,0,0,0,0,0,1.22988438543114,0.686271241194102,47.192622725709,24.7283857166763,10.9576579928678,4.44424536760942,0,0,0,0.463721619900307,0,0,0,0,0.790204397959275,0,0,0,0,0.93733833986777,0.335964256397719,1.98485136139341,8.50805965677059,2.90633938513962,2.30029607499127,0,0,0.414656231081544,0.288239906833923,0,0.571481048629521,1.52795370223311,0,0,0,1.20137223137567,0,0.112131084345361,0.43596006883328,0.07333828582095,0.258543431515556,53.6484668777824,2.535908257668,1.32969058292435,0,0.257207374262142,0,0,5.7191197463259,1.08524321078289,0,2.93162565864362,11.727934308504,0,0.602878754119172,0,2.29937879718731,0,0,0,0,2.29723871668228,0,1.59259437334337,10.2738161275192,2.50685348535854,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,1.03985430765404,0,1.26161932027148,0,0,13.6444502433591,3.10419213877515,0,0.368738337083406,1.56390506042549,0.587403472388222,0,0,0,0,0.303127571446259,0,0.30239029332968,4.46594054073798,1.68808170616869,3.64858122762996,49.8461290604677,4.60536524160033,1.12597744800525,1.48418066444991,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0.846016147141356,0.200506470303285,55.985241273025,0.459257792658427,0.182091168006717,1.31124414959424,2.25599806453706,1.15523005656622,0,0,0.316654886678627,0,0,0,0,0,0,0.764628819135115,0,0.447749509444357,0,0,84.372091163292,5.24823433119529,3.25378394664303,0.412164046590889,0,0,9.76251414593493,44.2040967304834,1.6068392984416,0.386682873168488,3.23502095940753,3.37708084397485,0.413509717453592,18.4762821173431,10.8762520435671,1.27839941124151,0.0890320356467374,2.97512847649761,3.2672311452068,4.97689578728878,8.29493803015509,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.18532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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=93099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25063 | |||
|TSSclassifier=S | |||
|UniProt=Q6E0U4 | |||
|association_with_transcript=0bp_to_ENST00000339686_5end | |||
|coexpression_cluster_id=C202 | |||
|description=CAGE_peak_3_at_DMKN_5end | |||
|id=chr19:36004543..36004557,- | |||
|ontology_enrichment_celltype=CL:0002076!4.95e-09!43;CL:0000066!5.37e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002159;2.70e-08;14!CL:0000154;4.87e-08;6!CL:0002077;7.98e-08;34!CL:0000622;1.50e-07;5!CL:0002368;2.57e-07;13!CL:0002076;2.89e-07;42!CL:0000362;3.65e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.03e-09,42;CL:0002159,2.16e-08,14;CL:0002077,2.42e-08,34;CL:0000154,4.22e-08,6;CL:0000622,1.46e-07,5;CL:0002368,2.51e-07,13;CL:0000362,3.52e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.83e-12!365;UBERON:0003102!9.74e-12!95;UBERON:0004119!4.73e-10!169;UBERON:0000925!4.73e-10!169;UBERON:0006595!4.73e-10!169;UBERON:0000468!3.78e-09!659;UBERON:0000486!1.28e-08!82;UBERON:0001004!3.19e-08!72;UBERON:0000161!4.30e-08!35;UBERON:0002100!1.79e-07!216;UBERON:0004923!4.04e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;6.52e-11;12!UBERON:0007196;9.21e-08;15!UBERON:0001558;9.21e-08;15!UBERON:0005910;1.43e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,2.23e-08,83;UBERON:0004119,2.34e-08,160;UBERON:0000925,2.34e-08,160;UBERON:0006595,2.34e-08,160;UBERON:0003102,9.08e-08,99;UBERON:0001004,9.37e-08,74;UBERON:0007196,9.56e-08,15;UBERON:0001558,9.56e-08,15;UBERON:0005910,1.55e-07,6 | |||
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| |||
|short_description=p3@DMKN | |||
}} |
Revision as of 20:11, 11 September 2013
Short description: | p3@DMKN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_DMKN_5end |
Coexpression cluster: | C202_salivary_skin_penis_tongue_uterus_cervical_immature |
Association with transcript: | 0bp_to_ENST00000339686_5end |
EntrezGene: | DMKN |
HGNC: | 25063 |
UniProt: | Q6E0U4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.03e-09 | 42 |
general ecto-epithelial cell | 2.16e-08 | 14 |
ecto-epithelial cell | 2.42e-08 | 34 |
protein secreting cell | 4.22e-08 | 6 |
acinar cell | 1.46e-07 | 5 |
respiratory epithelial cell | 2.51e-07 | 13 |
epidermal cell | 3.52e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 2.23e-08 | 83 |
endoderm-derived structure | 2.34e-08 | 160 |
endoderm | 2.34e-08 | 160 |
presumptive endoderm | 2.34e-08 | 160 |
surface structure | 9.08e-08 | 99 |
respiratory system | 9.37e-08 | 74 |
tracheobronchial tree | 9.56e-08 | 15 |
lower respiratory tract | 9.56e-08 | 15 |
transitional epithelium | 1.55e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.