FFCP PHASE1:Hg19::chr1:184943573..184943595,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=116496|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16784|TSSclassifier=S|UniProt=Q9BZQ8|association_with_transcript=86bp_to_ENST00000367511,NM_052966,uc001gra.2,uc009wyh.1,uc009wyi.1_5end|coexpression_cluster_id=C2|description=CAGE_peak_1_at_FAM129A_5end|id=chr1:184943573..184943595,-|ontology_enrichment_celltype=CL:0000738!2.02e-09!140;CL:0002057!7.32e-08!42;CL:0000766!4.78e-07!76;CL:0002087!6.78e-07!119|ontology_enrichment_celltype_v019=CL:0000860;1.10e-08;33!CL:0002057;1.10e-08;33|ontology_enrichment_celltype_v019_2=CL:0000738,1.52e-10,136;CL:0000766,2.43e-08,72;CL:0000860,7.19e-08,42;CL:0002057,7.19e-08,42;CL:0002087,7.29e-08,115;CL:0002009,9.30e-08,61;CL:0000037,2.64e-07,168;CL:0002032,3.37e-07,161;CL:0000837,3.37e-07,161;CL:0002031,3.67e-07,120;CL:0000988,3.78e-07,177;CL:0000473,5.60e-07,48;CL:0000234,5.60e-07,48;CL:0002194,5.82e-07,59;CL:0000576,5.82e-07,59;CL:0000040,5.82e-07,59;CL:0000559,5.82e-07,59|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.95e-09!102;UBERON:0003061!9.95e-09!102;UBERON:0000178!5.19e-08!15;UBERON:0000179!5.19e-08!15;UBERON:0000463!5.19e-08!15;UBERON:0002193!2.75e-07!112|ontology_enrichment_uberon_v019=UBERON:0000178;5.09e-08;15!UBERON:0000179;5.09e-08;15!UBERON:0000463;5.09e-08;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.10e-10,98;UBERON:0003061,5.10e-10,98;UBERON:0002193,2.55e-08,108;UBERON:0000178,5.09e-08,15;UBERON:0000179,5.09e-08,15;UBERON:0000463,5.09e-08,15|phase1_expression=15.0793054794562,8.34992043174834,36.0843274485686,1.0007329835313,18.7723659659461,8.72338524100369,7.59899634504932,18.3198763293781,6.26845507679612,0.982935746006035,0.697801167972428,0.436882744260345,0.527533956456907,2.59909341216098,3.97676850873499,18.8251041006497,12.0538905604795,10.9546513558106,7.80692478064811,5.78668972960903,3.67201244239655,7.52291331547411,30.341014635892,42.567946197667,19.710194416384,11.5384242679406,16.5022184794391,15.0337592309127,28.3222279331211,52.5846275393181,15.9460607015558,5.51652734687356,3.31326510656075,28.1013047726759,1.08454080812422,3.9807385096478,10.8632162553893,39.8876694142952,83.8275790425192,50.3465220060776,6.26963327871788,8.74512898251245,4.89393578504954,15.4122133106339,9.82477453590904,19.1641408338375,38.8156491632493,29.1929200495496,34.9968199111467,42.5784740636783,32.5324097291958,34.2899233338449,64.122696617011,58.0936215225443,39.2736811123591,15.0593871634084,14.7369321031237,26.2926476800749,60.6046106894387,44.609134763577,72.2450952152917,33.3149813188583,24.1351025722175,29.8357325372886,146.555665507435,187.804509372767,244.769143855261,29.6473425002957,19.8163508999677,25.8454725199089,126.528496050374,155.78144002274,183.548184715713,8.66146673878961,9.14198489849687,5.66078342872615,17.6355950899997,22.5265339262259,23.6266612444708,2.28010194992999,3.38158351238453,2.55729815270488,14.0796995569058,8.19207916893197,4.44754626931777,3.41384178053206,4.00395987036012,9.19603903927173,7.27149360063348,6.67837628174755,4.55370375287559,6.45960908308033,4.96955196562797,13.2171328579026,52.6878049202644,7.63813845847723,24.9821408044568,54.6284960221339,59.6244347098577,57.8465274051746,11.7332015988093,11.3627473376336,5.84480185223734,55.9280493563571,116.95854526751,84.6259477309433,95.3229600452855,50.9803452508187,41.4889318716012,24.9945614997588,23.2134014940113,28.4007024020351,0.741432815810302,0.267540828089713,0,50.9892042139048,35.2562854113768,34.7063719937456,28.8442448902233,25.1666677316036,21.4857539772618,19.9594929334159,18.0690142893327,17.6621523393097,27.4847598415161,32.4384835300303,34.487375870684,63.304517372566,118.20856653631,51.123014570628,9.75227465255847,13.4140171940727,24.4217493121143,20.9634708383048,9.5254203020819,11.0083354410226,23.858578411533,23.3584737745265,11.0605736081959,7.76052891118974,5.79709585574632,10.0853888133239,6.9216104775583,9.64039551239516,38.945687238562,48.7563264437948,62.7561573649044,14.5479280826259,14.2998727695032,9.28643753323912,2.78267370313387,3.4409383804245,0.694281003215189,0.56530794192401,0.838998872419812,1.10047216776027,2.29894463190492,4.13466814670926,3.5576626268671,12.0499420595281,2.41697590265488,0,3.1728067481262,0.367663080345869,0,0.803697554556718,0.898117490504679,0.788280363383256,0,0,0.366403487860815,454.642440154418,666.98205433512,2.61656431285521,27.3334573432425,28.8717566595242,26.8790637050834,47.0412058028055,21.6347713140998,16.2596504041269,12.8098794875646,8.38669664618344,16.1829738407878,23.8437889563348,18.3077331487074,2.8757911252537,1.72852777344,25.7753575017176,6.86752169026705,9.12754914471119,4.63290909710583,16.3233953114833,18.1297697692307,7.44389275521917,10.2077085627447,10.9322542407473,30.377779665675,20.1960485737949,30.9083661598196,8.19145225744224,6.46756327634615,10.9418474070143,12.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957447,11.0062902321942,48.4568448361486,57.99072156691,30.1140815696666,3.27515248846948,0.596852325484105,1.30812099855325,34.5615011039218,1.31928620094515,12.8318417031673,12.2706911391632,7.21246549663059,25.3971340035222,406.946214111483,61.747255340626,5.30032861210352,8.6143456094855,10.9890489171684,27.3582654647385,17.1990569903132,10.3132620757723,4.99705779624645,48.0310094849219,19.7621128160787,3.37013740094507,43.0898469065445,157.802873491162,8.88705415538998,0,1.76777874496378,0.436350690340377,27.5093957068008,14.8798007266701,3.69740502905135,0,2.3971620718665,0.764859003745869,0,31.5145483902724,20.8429576107137,61.6614775878809,10.7804241895721,16.3681988151397,4.28742608249886,4.97501663675268,3.82702084689012,37.7424147964736,27.1393451868664,11.9489483196611,9.86987957304141,33.639558774184,4.9008311874187,9.90374225895274,42.4547658399075,36.9611965172104,22.9670500779743,43.0333232356058,39.9192427855216,17.4202994827485,52.1896721342029,5.7921684686082,56.32040172083,126.706108897865,33.6163971502883,19.5310165591554,59.2523529025106,36.2292828463847,20.5163835074069|short_description=p1@FAM129A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=116496 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16784 | |||
|TSSclassifier=S | |||
|UniProt=Q9BZQ8 | |||
|association_with_transcript=86bp_to_ENST00000367511,NM_052966,uc001gra.2,uc009wyh.1,uc009wyi.1_5end | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_FAM129A_5end | |||
|id=chr1:184943573..184943595,- | |||
|ontology_enrichment_celltype=CL:0000738!2.02e-09!140;CL:0002057!7.32e-08!42;CL:0000766!4.78e-07!76;CL:0002087!6.78e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.10e-08;33!CL:0002057;1.10e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.52e-10,136;CL:0000766,2.43e-08,72;CL:0000860,7.19e-08,42;CL:0002057,7.19e-08,42;CL:0002087,7.29e-08,115;CL:0002009,9.30e-08,61;CL:0000037,2.64e-07,168;CL:0002032,3.37e-07,161;CL:0000837,3.37e-07,161;CL:0002031,3.67e-07,120;CL:0000988,3.78e-07,177;CL:0000473,5.60e-07,48;CL:0000234,5.60e-07,48;CL:0002194,5.82e-07,59;CL:0000576,5.82e-07,59;CL:0000040,5.82e-07,59;CL:0000559,5.82e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.95e-09!102;UBERON:0003061!9.95e-09!102;UBERON:0000178!5.19e-08!15;UBERON:0000179!5.19e-08!15;UBERON:0000463!5.19e-08!15;UBERON:0002193!2.75e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.09e-08;15!UBERON:0000179;5.09e-08;15!UBERON:0000463;5.09e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.10e-10,98;UBERON:0003061,5.10e-10,98;UBERON:0002193,2.55e-08,108;UBERON:0000178,5.09e-08,15;UBERON:0000179,5.09e-08,15;UBERON:0000463,5.09e-08,15 | |||
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| |||
|short_description=p1@FAM129A | |||
}} |
Revision as of 02:18, 12 September 2013
Short description: | p1@FAM129A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_FAM129A_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 86bp_to_ENST00000367511, NM_052966, uc001gra.2, uc009wyh.1, uc009wyi.1_5end |
EntrezGene: | FAM129A |
HGNC: | 16784 |
UniProt: | Q9BZQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 1.52e-10 | 136 |
myeloid leukocyte | 2.43e-08 | 72 |
classical monocyte | 7.19e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.19e-08 | 42 |
nongranular leukocyte | 7.29e-08 | 115 |
macrophage dendritic cell progenitor | 9.30e-08 | 61 |
hematopoietic stem cell | 2.64e-07 | 168 |
hematopoietic oligopotent progenitor cell | 3.37e-07 | 161 |
hematopoietic multipotent progenitor cell | 3.37e-07 | 161 |
hematopoietic lineage restricted progenitor cell | 3.67e-07 | 120 |
hematopoietic cell | 3.78e-07 | 177 |
defensive cell | 5.60e-07 | 48 |
phagocyte | 5.60e-07 | 48 |
monopoietic cell | 5.82e-07 | 59 |
monocyte | 5.82e-07 | 59 |
monoblast | 5.82e-07 | 59 |
promonocyte | 5.82e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.10e-10 | 98 |
blood island | 5.10e-10 | 98 |
hemolymphoid system | 2.55e-08 | 108 |
blood | 5.09e-08 | 15 |
haemolymphatic fluid | 5.09e-08 | 15 |
organism substance | 5.09e-08 | 15 |
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