FFCP PHASE1:Hg19::chr1:218519607..218519630,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7042|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11768|TSSclassifier=S|UniProt=P61812|association_with_transcript=30bp_to_ENST00000366929,ENST00000366930_5end|coexpression_cluster_id=C927|description=CAGE_peak_5_at_TGFB2_5end|id=chr1:218519607..218519630,+|ontology_enrichment_celltype=CL:0000359!8.19e-07!32|ontology_enrichment_celltype_v019=CL:0000359;4.58e-07;32|ontology_enrichment_celltype_v019_2=CL:0000359,2.88e-07,32|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!2.75e-24!286;UBERON:0000481!3.39e-21!347;UBERON:0000119!9.04e-20!312;UBERON:0004111!6.55e-19!241;UBERON:0000483!7.87e-19!309;UBERON:0000033!6.02e-18!123;UBERON:0000025!1.22e-16!194;UBERON:0000153!1.37e-16!129;UBERON:0007811!1.37e-16!129;UBERON:0000475!1.71e-16!365;UBERON:0004121!3.00e-15!169;UBERON:0000924!9.36e-15!173;UBERON:0006601!9.36e-15!173;UBERON:0003075!1.33e-14!86;UBERON:0007284!1.33e-14!86;UBERON:0005743!2.29e-14!86;UBERON:0001017!5.38e-14!82;UBERON:0002346!9.07e-14!90;UBERON:0000073!2.22e-13!94;UBERON:0001016!2.22e-13!94;UBERON:0002616!2.06e-12!59;UBERON:0000955!2.70e-12!69;UBERON:0006238!2.70e-12!69;UBERON:0001049!3.72e-11!57;UBERON:0005068!3.72e-11!57;UBERON:0006241!3.72e-11!57;UBERON:0007135!3.72e-11!57;UBERON:0000468!4.59e-11!659;UBERON:0000922!4.84e-10!612;UBERON:0000467!9.84e-10!625;UBERON:0002050!1.03e-09!605;UBERON:0005423!1.03e-09!605;UBERON:0000480!1.43e-09!626;UBERON:0003056!1.50e-09!61;UBERON:0000923!2.07e-09!604;UBERON:0005291!2.07e-09!604;UBERON:0006598!2.07e-09!604;UBERON:0002532!2.07e-09!604;UBERON:0000062!1.64e-08!511;UBERON:0002049!6.39e-08!79;UBERON:0007798!6.39e-08!79;UBERON:0000064!1.07e-07!219;UBERON:0003080!1.13e-07!42;UBERON:0002200!1.48e-07!11;UBERON:0006876!1.48e-07!11;UBERON:0002020!2.70e-07!34;UBERON:0003528!2.70e-07!34;UBERON:0002780!3.06e-07!41;UBERON:0001890!3.06e-07!41;UBERON:0006240!3.06e-07!41;UBERON:0003914!3.77e-07!118;UBERON:0001893!8.09e-07!34;UBERON:0002791!8.24e-07!33|ontology_enrichment_uberon_v019=UBERON:0006876;4.31e-11;11!UBERON:0005284;1.88e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0006876,2.00e-11,11;UBERON:0002049,1.42e-08,78;UBERON:0007798,1.42e-08,78;UBERON:0005284,1.50e-07,5;UBERON:0000119,2.74e-07,309;UBERON:0000025,2.95e-07,192;UBERON:0000483,8.93e-07,306|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0.783556884599516,0.737201809504527,1.39560233594486,0,0,0.247532705920093,0.662794751455832,2.01697543935533,0,0.730310090387373,0.487932798790507,0.61560529038394,2.24400760368678,0.313454721478088,2.0036519099174,2.05311637609326,3.89182182743889,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,1.44575660953827,0.50133791063589,0,0,0.973269740605272,1.89069634328136,3.99112915432615,7.64162635530197,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0.419499436209906,0,0.208994966536811,0.258416759169329,0,0.66944122552934,0,0,0,0,3.24056779152704,0,0,0,0,0,0.183201743930407,0,0,0,0.993943903390637,2.65924074495618,2.78059279707759,5.16305917347865,1.06400514659507,1.12135520028461,2.1349799145941,3.94668077467456,0.311211035399766,1.0776853765575,0.980771418680752,2.4217188423189,4.60940739583999,0.234321431833797,0,0,0,0,0,0,0.204154171254893,0,0.826606249406124,2.37600571456411,0.989067717114227,0,0,0.168336113954066,0.250237039743928,1.93944880838928,3.07284334616587,0.919463387397059,2.70428506031874,1.24775401476023,0.89694817844431,0.213557388818567,0,0,0,0.515281080091258,0.744467425326359,0.168776332241266,0,0,0,0.161646056818812,1.77504796258307,0.705264687593482,0,0.57978255948989,0.272746120590835,0.860413786167011,0,0,0.232387885739037,0.414644220061482,0,0,1.56449532329816,0.643240938192885,0,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0,0,0,1.40241773803446,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,2.40194934417936,0.329250856225877,0,0,0,0,1.03993478527958,1.44331342025273,1.507095264676,24.1861910125793,0.288732895522148,0.462985512576611,1.33177906564219,0,0.858486162094873,0,0,0,0,1.51183915378974,0.425325291727159,0.716468181622786,0.871901815541886,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,1.23344192779897,3.05172048183296,0.66004457238855,1.29271715757778,0,0,0.26593811658487,0,0,1.41849132023278,0,2.14466990487221,0,0,0,0.710783897485092,0,0.602878754119172,0,0.199945982364114,0,0.502257091432126,0,5.75099653179798,3.44585807502342,0,0.579125226670317,0,0,0,0,0,0,0.76228387266739,0,1.54657762555539,0.837581326671744,1.27587750330633,0,0,0,0.24538298343828,1.00034104211935,1.08506009479894,2.9115920614313,5.70972764150918,2.83864347061082,2.69425254483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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7042 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11768 | |||
|TSSclassifier=S | |||
|UniProt=P61812 | |||
|association_with_transcript=30bp_to_ENST00000366929,ENST00000366930_5end | |||
|coexpression_cluster_id=C927 | |||
|description=CAGE_peak_5_at_TGFB2_5end | |||
|id=chr1:218519607..218519630,+ | |||
|ontology_enrichment_celltype=CL:0000359!8.19e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.58e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.88e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000477!2.75e-24!286;UBERON:0000481!3.39e-21!347;UBERON:0000119!9.04e-20!312;UBERON:0004111!6.55e-19!241;UBERON:0000483!7.87e-19!309;UBERON:0000033!6.02e-18!123;UBERON:0000025!1.22e-16!194;UBERON:0000153!1.37e-16!129;UBERON:0007811!1.37e-16!129;UBERON:0000475!1.71e-16!365;UBERON:0004121!3.00e-15!169;UBERON:0000924!9.36e-15!173;UBERON:0006601!9.36e-15!173;UBERON:0003075!1.33e-14!86;UBERON:0007284!1.33e-14!86;UBERON:0005743!2.29e-14!86;UBERON:0001017!5.38e-14!82;UBERON:0002346!9.07e-14!90;UBERON:0000073!2.22e-13!94;UBERON:0001016!2.22e-13!94;UBERON:0002616!2.06e-12!59;UBERON:0000955!2.70e-12!69;UBERON:0006238!2.70e-12!69;UBERON:0001049!3.72e-11!57;UBERON:0005068!3.72e-11!57;UBERON:0006241!3.72e-11!57;UBERON:0007135!3.72e-11!57;UBERON:0000468!4.59e-11!659;UBERON:0000922!4.84e-10!612;UBERON:0000467!9.84e-10!625;UBERON:0002050!1.03e-09!605;UBERON:0005423!1.03e-09!605;UBERON:0000480!1.43e-09!626;UBERON:0003056!1.50e-09!61;UBERON:0000923!2.07e-09!604;UBERON:0005291!2.07e-09!604;UBERON:0006598!2.07e-09!604;UBERON:0002532!2.07e-09!604;UBERON:0000062!1.64e-08!511;UBERON:0002049!6.39e-08!79;UBERON:0007798!6.39e-08!79;UBERON:0000064!1.07e-07!219;UBERON:0003080!1.13e-07!42;UBERON:0002200!1.48e-07!11;UBERON:0006876!1.48e-07!11;UBERON:0002020!2.70e-07!34;UBERON:0003528!2.70e-07!34;UBERON:0002780!3.06e-07!41;UBERON:0001890!3.06e-07!41;UBERON:0006240!3.06e-07!41;UBERON:0003914!3.77e-07!118;UBERON:0001893!8.09e-07!34;UBERON:0002791!8.24e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0006876;4.31e-11;11!UBERON:0005284;1.88e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006876,2.00e-11,11;UBERON:0002049,1.42e-08,78;UBERON:0007798,1.42e-08,78;UBERON:0005284,1.50e-07,5;UBERON:0000119,2.74e-07,309;UBERON:0000025,2.95e-07,192;UBERON:0000483,8.93e-07,306 | |||
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| |||
|short_description=p5@TGFB2 | |||
}} |
Revision as of 03:40, 12 September 2013
Short description: | p5@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_TGFB2_5end |
Coexpression cluster: | C927_Lens_gall_Ciliary_mesodermal_Fibroblast_Meningeal_cholangiocellular |
Association with transcript: | 30bp_to_ENST00000366929, ENST00000366930_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | P61812 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.88e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
vasculature of organ | 2.00e-11 | 11 |
vasculature | 1.42e-08 | 78 |
vascular system | 1.42e-08 | 78 |
brain vasculature | 1.50e-07 | 5 |
cell layer | 2.74e-07 | 309 |
tube | 2.95e-07 | 192 |
epithelium | 8.93e-07 | 306 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.