FFCP PHASE1:Hg19::chr1:236228513..236228516,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4811|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7821|TSSclassifier=S|UniProt=P14543|association_with_transcript=-32bp_to_NM_002508,uc001hxo.2,uc009xgd.2_5end|description=CAGE_peak_5_at_NID1_5end|id=chr1:236228513..236228516,-|ontology_enrichment_celltype=CL:0000055!1.17e-15!180;CL:0000057!2.71e-13!75;CL:0002078!1.53e-10!44;CL:0000222!2.11e-10!119;CL:0000115!4.50e-10!35;CL:0000144!1.02e-08!625;CL:0000213!2.27e-08!57;CL:0000215!2.27e-08!57;CL:0002371!3.93e-08!591;CL:0002620!1.07e-07!23;CL:0002139!1.39e-07!24;CL:0000048!4.56e-07!430|ontology_enrichment_celltype_v019=CL:0000115;1.77e-07;36!CL:0002549;3.24e-07;2|ontology_enrichment_celltype_v019_2=CL:0000115,1.60e-08,36;CL:0002549,3.71e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!3.26e-10!79;UBERON:0007798!3.26e-10!79;UBERON:0004535!1.20e-08!110;UBERON:0001009!2.02e-08!113|ontology_enrichment_uberon_v019=UBERON:0005629;3.24e-07;2!UBERON:0005358;3.24e-07;2!UBERON:0001886;3.24e-07;2!UBERON:0004086;3.24e-07;2!UBERON:0005282;3.24e-07;2!UBERON:0005281;3.24e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0005629,3.71e-07,2;UBERON:0005358,3.71e-07,2;UBERON:0001886,3.71e-07,2;UBERON:0004086,3.71e-07,2;UBERON:0005282,3.71e-07,2;UBERON:0005281,3.71e-07,2|phase1_expression=0.54503513781167,0.214100523890983,0.845726424575827,1.0007329835313,0.446961094427288,1.74467704820074,0,0.631719873426831,0.522371256399677,0,0,0.436882744260345,0,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.246242116153576,1.83600622119828,0.940364164434263,0,0.136874425072884,0.627713197974014,0.458480434487708,0.410502947249729,0.314843125254717,0,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0,0,0,1.00272223735071,0.217010870715852,0.671746422719773,0.647787332037959,0.77272670290256,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0.645484683583826,0,0.752969358170419,0.818718450173537,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0.797854630486527,0.426224750532694,0.580418477257168,0.56738522469114,0,1.00499466102697,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.850417199860174,0,0.336985893439485,0.600707571366025,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40648818027883,0.722878304769133,2.00535164254356,0.289693037921647,0,0,0.0945348171640679,0.665188192387692,0.175669571386252,0.392937226493138,0,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.347140501607594,0.56530794192401,0,0.275118041940067,0.417989933073621,1.29208379584664,1.06729878806013,2.34304428935269,2.01414658554573,0.760272105718513,0.976248230192678,0.367663080345869,2.43042584364528,0.803697554556718,1.12264686313085,0.900891843866578,1.53316637465883,0,0.549605231791222,0,0,0,0.496971951695318,0.506522046658319,0.264818361626438,3.44203944898576,0.709336764396714,0.560677600142307,0,0.74000264525148,1.8672662123986,0.942974704487816,0.653847612453835,2.27036141467397,2.30470369792,0,0.312160076830321,0,0.298897361103602,0.469737994575059,0.809364721840658,0.140450806702248,0.61246251376468,0.245668634623536,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0.500474079487857,0.554128230968366,0.877955241761676,0.919463387397059,0.901428353439581,0.794025282120147,0.717558542755448,1.92201649936711,0.847727604638247,2.70081986475962,1.13357782162283,0.257640540045629,0.558350568994769,1.35021065793013,0.876933046450788,0.504867548488229,0.552299391853796,0.323292113637624,2.84007674013291,0.705264687593482,0.67824236924195,0,0,0,0.243947412259191,0,0.232387885739037,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,1.6462960453256,1.47008711385542,1.26755034821831,0,0,0,0.245976877086227,0.857839051492628,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.577465791044295,0.462985512576611,0,0,0,0.246217006087397,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.12624243342638,0.126995788584338,1.14596527667483,1.17217447210047,0,0.308482478109971,0,0.285826432630578,1.56983518083505,2.61576041299968,0.2933531432838,0.775630294546667,3.57656445851882,0.845302752556,0.797814349754612,0,0.771622122786426,0,0,0.142977993658148,2.17048642156577,0,0.65147236858747,0.710783897485092,0,0.904318131178758,0,0.199945982364114,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0,0.542530047399471,0.415941723061614,0.535286966391485,0.157702415033935,0.234282829985426,0,0,1.03473071292505,0,0.368738337083406,0.434418072340414,1.17480694477644,1.0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4811 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7821 | |||
|TSSclassifier=S | |||
|UniProt=P14543 | |||
|association_with_transcript=-32bp_to_NM_002508,uc001hxo.2,uc009xgd.2_5end | |||
|description=CAGE_peak_5_at_NID1_5end | |||
|id=chr1:236228513..236228516,- | |||
|ontology_enrichment_celltype=CL:0000055!1.17e-15!180;CL:0000057!2.71e-13!75;CL:0002078!1.53e-10!44;CL:0000222!2.11e-10!119;CL:0000115!4.50e-10!35;CL:0000144!1.02e-08!625;CL:0000213!2.27e-08!57;CL:0000215!2.27e-08!57;CL:0002371!3.93e-08!591;CL:0002620!1.07e-07!23;CL:0002139!1.39e-07!24;CL:0000048!4.56e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.77e-07;36!CL:0002549;3.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.60e-08,36;CL:0002549,3.71e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!3.26e-10!79;UBERON:0007798!3.26e-10!79;UBERON:0004535!1.20e-08!110;UBERON:0001009!2.02e-08!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.24e-07;2!UBERON:0005358;3.24e-07;2!UBERON:0001886;3.24e-07;2!UBERON:0004086;3.24e-07;2!UBERON:0005282;3.24e-07;2!UBERON:0005281;3.24e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,3.71e-07,2;UBERON:0005358,3.71e-07,2;UBERON:0001886,3.71e-07,2;UBERON:0004086,3.71e-07,2;UBERON:0005282,3.71e-07,2;UBERON:0005281,3.71e-07,2 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.845726424575827,1.0007329835313,0.446961094427288,1.74467704820074,0,0.631719873426831,0.522371256399677,0,0,0.436882744260345,0,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.246242116153576,1.83600622119828,0.940364164434263,0,0.136874425072884,0.627713197974014,0.458480434487708,0.410502947249729,0.314843125254717,0,0.383829398097213,0.309632246632152,0,0,0.369754010166788,0,0,0,0,1.00272223735071,0.217010870715852,0.671746422719773,0.647787332037959,0.77272670290256,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0,0,0,0.47296445977717,0,0.645484683583826,0,0.752969358170419,0.818718450173537,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0.797854630486527,0.426224750532694,0.580418477257168,0.56738522469114,0,1.00499466102697,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0.211255286311942,0.850417199860174,0,0.336985893439485,0.600707571366025,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40648818027883,0.722878304769133,2.00535164254356,0.289693037921647,0,0,0.0945348171640679,0.665188192387692,0.175669571386252,0.392937226493138,0,0,0,0,0,0,0,0,1.19257444420023,0.860234595106124,0.347140501607594,0.56530794192401,0,0.275118041940067,0.417989933073621,1.29208379584664,1.06729878806013,2.34304428935269,2.01414658554573,0.760272105718513,0.976248230192678,0.367663080345869,2.43042584364528,0.803697554556718,1.12264686313085,0.900891843866578,1.53316637465883,0,0.549605231791222,0,0,0,0.496971951695318,0.506522046658319,0.264818361626438,3.44203944898576,0.709336764396714,0.560677600142307,0,0.74000264525148,1.8672662123986,0.942974704487816,0.653847612453835,2.27036141467397,2.30470369792,0,0.312160076830321,0,0.298897361103602,0.469737994575059,0.809364721840658,0.140450806702248,0.61246251376468,0.245668634623536,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0.336672227908132,0.500474079487857,0.554128230968366,0.877955241761676,0.919463387397059,0.901428353439581,0.794025282120147,0.717558542755448,1.92201649936711,0.847727604638247,2.70081986475962,1.13357782162283,0.257640540045629,0.558350568994769,1.35021065793013,0.876933046450788,0.504867548488229,0.552299391853796,0.323292113637624,2.84007674013291,0.705264687593482,0.67824236924195,0,0,0,0.243947412259191,0,0.232387885739037,0,0,0,0,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,1.4763109092493,1.40241773803446,1.6462960453256,1.47008711385542,1.26755034821831,0,0,0,0.245976877086227,0.857839051492628,0.109750285408626,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0.577465791044295,0.462985512576611,0,0,0,0.246217006087397,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0,0.088048434013226,0.414656231081544,0.432359860250884,0.12624243342638,0.126995788584338,1.14596527667483,1.17217447210047,0,0.308482478109971,0,0.285826432630578,1.56983518083505,2.61576041299968,0.2933531432838,0.775630294546667,3.57656445851882,0.845302752556,0.797814349754612,0,0.771622122786426,0,0,0.142977993658148,2.17048642156577,0,0.65147236858747,0.710783897485092,0,0.904318131178758,0,0.199945982364114,0,0,0,0.479249710983165,1.14861935834114,0,0.579125226670317,0.61642896765115,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0.613457458595699,0,0.542530047399471,0.415941723061614,0.535286966391485,0.157702415033935,0.234282829985426,0,0,1.03473071292505,0,0.368738337083406,0.434418072340414,1.17480694477644,1.02943027143257,0.206768026122887,0,0.106727557803444,0,0,0,0.992431231275107,0.920771839728375,0.280660094433074,1.15325234330131,0,1.44768529029247,0,0.308419387605311,0.532685175939381,0.164254312027618,0.519254429183621,0.464841513839837,0.120859449591622,0.40101294060657,0.276242966807689,0.229628896329213,0.182091168006717,0.393373244878272,0.902399225814824,0.308061348417659,0,0,0.422206515571503,2.27466768141793,1.19065593693561,0.431831832204279,0,0.541892875087706,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.412164046590889,0.457847324091717,0.330037999682352,0.574265537996172,0.650060246036521,0,0.386682873168488,1.23238893691716,0.614014698904518,0,0.214840489736547,0.725083469571143,0.170453254832202,0.356128142586949,0,0,0,0,0,2.51849877464512,0.6970372701606,0.616067160352178,1.59691809095107,0,0.37064843820784,0.143124886741991,0.744316738719335,1.2655176988749,0.762520775695299,0.255897791311334,0.855877976067841,0.318203247925937,0,0.179872457583315,0.823611089208164,1.41374882814824,0.606547444719948,0,0.421258456238981,0,0.243713489631284,0,0.818999468447914,0.282810863907425,0,0.551365343546124,0,0,0.578775534266688,0.655894752046633,0.405820753925408,0.30982349809975,0.563391205064483,0,0.589494246078727,0,0,0.633322905892992,0.658589785919804,0.75894634753143,0.699869440489966,0,0,0,0.470719003883896,0.86101074534246,0,0,0.459446800413919,0,0,0,0.476463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| |||
|short_description=p5@NID1 | |||
}} |
Revision as of 04:25, 12 September 2013
Short description: | p5@NID1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_NID1_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_NM_002508, uc001hxo.2, uc009xgd.2_5end |
EntrezGene: | NID1 |
HGNC: | 7821 |
UniProt: | P14543 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.60e-08 | 36 |
fibroblast of choroid plexus | 3.71e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 3.71e-07 | 2 |
ventricle of nervous system | 3.71e-07 | 2 |
choroid plexus | 3.71e-07 | 2 |
brain ventricle | 3.71e-07 | 2 |
ventricular system of brain | 3.71e-07 | 2 |
ventricular system of central nervous system | 3.71e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.