FFCP PHASE1:Hg19::chr1:27114656..27114712,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55650|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=26031|TSSclassifier=S|UniProt=Q9NUD9,B4DWP9|association_with_transcript=0bp_to_ENST00000374145,ENST00000449950,NM_001202554,uc001bna.2,uc010ofg.1_5end|description=CAGE_peak_1_at_PIGV_5end|id=chr1:27114656..27114712,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!3.93e-12!365;UBERON:0000481!1.03e-10!347;UBERON:0004119!3.01e-09!169;UBERON:0000925!3.01e-09!169;UBERON:0006595!3.01e-09!169;UBERON:0001007!5.26e-07!155;UBERON:0001555!5.26e-07!155;UBERON:0007026!5.26e-07!155;UBERON:0003104!6.17e-07!238;UBERON:0009142!6.17e-07!238|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.41e-08,160;UBERON:0000925,2.41e-08,160;UBERON:0006595,2.41e-08,160|phase1_expression=2.54349730978779,5.56661362116556,5.21531295155093,6.00439790118782,4.46961094427288,6.97870819280295,10.1319951267324,3.79031924056099,9.40268261519419,2.21160542851358,2.09340350391728,3.71350332621293,6.33040747748289,8.66364470720326,12.5931002776608,3.36162573225888,5.42425075221579,5.84248072309899,1.46379839637152,4.062994916534,5.30401797235058,5.01527554364941,1.43117993565528,1.91624195102038,2.13422487311165,2.36881557818649,2.05251473624864,1.8890587515283,1.57345710739562,0.383829398097213,1.23852898652861,8.27479102031034,7.8313538882345,5.17655614233503,2.47895041856965,2.98555388223585,1.46800219667424,1.10799081706375,1.40381113229099,0.651032612147555,3.35873211359887,4.53451132426571,3.60605794687861,1.74477886535478,2.26725566213286,2.18325655069035,0.464858073811369,2.05583944010913,0.619412741790207,0,0.256160706529101,0.236482229888585,0,0,4.06279459783025,1.12945403725563,1.36453075028923,1.12361742222542,1.53041946185451,0,1.27867425159808,0.659702600373432,0.797854630486527,0.426224750532694,0,0,0,1.00499466102697,0.521482918420201,0.434377689410233,1.21079900526674,0,0,2.32380814943136,1.91343869968539,1.67726916406701,2.80821577866238,2.55300717830561,2.08943262706204,3.42015292489498,3.38158351238453,3.28795476776341,0,3.27683166757279,2.66852776159066,2.13365111283254,2.80277190925209,4.02326707968138,1.98313461835459,1.90810750907073,0.569212969109448,1.76171156811282,0.382273228125229,0,1.68152568894461,1.84368859342554,1.57367816091066,0.393010762749165,0.411202997999018,4.01247588937627,2.93330039970231,2.36723902867367,0,4.67923918917729,2.65145316727353,2.21533894583621,1.89562704635511,3.45846563259323,2.86130564631732,3.12432018746985,2.48715016007264,1.73881851441031,1.33457906845854,2.94294910898684,0,3.05935225283429,2.29932296161153,1.37450978193052,1.26509846009751,3.50421955756506,2.60433381542567,3.8018081777935,3.312652619711,3.58362511232371,2.49861453104692,2.8413270245282,4.10563998460523,0.604820229674197,0.534880391567015,0.434473211648397,4.87613732627923,2.01210257911091,1.91793842765295,2.89151321907653,6.01605492763067,6.95263291011954,1.5905718941022,3.40644409211845,2.83604451492204,1.99556457716308,2.10803485663503,5.82856885964821,9.4716774956061,7.41568885568859,3.57002133020152,2.61194605948901,1.99436940778298,0.715471872916026,1.14398982156026,1.48583000531826,1.39133685156694,2.58070378531837,0.694281003215189,2.82653970962005,2.09749718104953,0.275118041940067,1.04497483268405,1.55050055501597,2.13459757612026,1.33888245105868,2.01414658554573,3.80136052859256,2.4406205754817,0.735326160691737,0.81014194788176,1.16089646769304,2.02076435363553,1.68917220724983,0,2.84779697870439,1.09921046358244,1.31780417436063,0,10.0301631992783,4.96971951695318,2.15271869829786,4.10468460520978,4.58938593198102,2.12801029319014,1.12135520028461,1.06748995729705,6.166688710429,2.48968828319813,2.69421344139376,2.7788523529288,4.23800797405808,1.72852777344,4.45210720484214,5.61888138294577,3.4228309292667,3.58676833324323,3.52303495931295,2.26622122115384,2.52811452064047,7.34955016517616,1.47401180774122,10.3325781175765,3.56400857184616,7.17074094907815,3.64064544775211,7.90479955997862,1.68336113954066,2.00189631795143,3.3247693858102,3.5118209670467,3.67785354958824,4.8076178850111,0.907457465280168,0.89694817844431,5.97960688691989,3.39091041855299,5.40163972951924,2.67936576019941,1.8034837803194,3.35010341396862,3.71307930930786,2.24105111870757,2.77677151668526,6.25939310767636,7.27407255684654,5.68015348026583,3.12331504505685,1.52604533079439,3.47869535693934,3.27295344709002,2.29443676311203,1.58565817968474,1.32529768321485,2.20768491452085,2.90250954043037,2.27088765788066,5.47466038613745,4.69348596989448,1.92972281457866,5.52539685409922,10.6804623447355,22.3782639317572,3.66751080123516,2.69735504124963,3.85617647813571,2.75734931830985,3.7039505495709,3.32178866755535,3.37078270400411,4.31687223275761,2.69323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3404541,5.8769229092095,0.946629373159108,4.21547239183671,1.74540276136151,4.2322147241232,2.60396512716726,6.47045880083986,2.59575937274273,1.51399709802095,4.69841959443891,2.66066852124018,1.1218771271618,0.534434810531121,1.56221329209236,0.50141507858475,8.48721420044281,9.37874455546625,0.829169439458779,5.68881477240424,3.41174371041569,2.61870874610114,2.58355639344024,4.40730471500591,1.90624166387043,9.8016623748374,6.87198442457946,3.04803447055746,1.71116650542641,2.6940821205835,4.08816570738255,2.99394320891412,1.95367844666339,4.8027305644972,5.7921684686082,4.7607357116491,4.69281884806909,3.42276043712026,1.62758471326295,1.33151354837103,2.61655931668334,2.24397944612263|short_description=p1@PIGV}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=55650 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26031 | |||
|TSSclassifier=S | |||
|UniProt=Q9NUD9,B4DWP9 | |||
|association_with_transcript=0bp_to_ENST00000374145,ENST00000449950,NM_001202554,uc001bna.2,uc010ofg.1_5end | |||
|description=CAGE_peak_1_at_PIGV_5end | |||
|id=chr1:27114656..27114712,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!3.93e-12!365;UBERON:0000481!1.03e-10!347;UBERON:0004119!3.01e-09!169;UBERON:0000925!3.01e-09!169;UBERON:0006595!3.01e-09!169;UBERON:0001007!5.26e-07!155;UBERON:0001555!5.26e-07!155;UBERON:0007026!5.26e-07!155;UBERON:0003104!6.17e-07!238;UBERON:0009142!6.17e-07!238 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,2.41e-08,160;UBERON:0000925,2.41e-08,160;UBERON:0006595,2.41e-08,160 | |||
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| |||
|short_description=p1@PIGV | |||
}} |
Revision as of 05:00, 12 September 2013
Short description: | p1@PIGV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PIGV_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000374145, ENST00000449950, NM_001202554, uc001bna.2, uc010ofg.1_5end |
EntrezGene: | PIGV |
HGNC: | 26031 |
UniProt: | Q9NUD9B4DWP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 2.41e-08 | 160 |
endoderm | 2.41e-08 | 160 |
presumptive endoderm | 2.41e-08 | 160 |
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