FFCP PHASE1:Hg19::chr1:40525070..40525096,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10487|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=20040|TSSclassifier=S|UniProt=Q01518|association_with_transcript=51bp_to_AB590394,BT007152,CR457409,CU680712,DQ890660,DQ893840_5end|coexpression_cluster_id=C62|description=CAGE_peak_8_at_CAP1_5end|id=chr1:40525070..40525096,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000945;2.37e-11;24|ontology_enrichment_celltype_v019_2=CL:0000945,1.72e-11,24;CL:0000826,1.72e-11,24;CL:0000738,8.29e-09,136;CL:0000785,8.98e-08,2;CL:0000955,8.98e-08,2;CL:0000818,8.98e-08,2;CL:0000954,8.98e-08,2;CL:0000816,8.98e-08,2;CL:0002087,1.85e-07,115;CL:0002031,6.04e-07,120|ontology_enrichment_development_v019=CL:0000954;9.16e-08;2!UBERON:0006965;6.05e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;1.44e-11;10|ontology_enrichment_disease_v019_2=DOID:0060058,1.20e-11,10|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001829;6.05e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.79e-07,2|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,1.20538905604795,0,0.975865597581014,0,0.408001382488506,0,0,0.136874425072884,0.251085279189606,0.764134057479513,0.492603536699674,1.02324015707783,0,0.383829398097213,0,0.919421224478927,0,0.739508020333575,27.733257807748,3.12772311472327,0.293600439334847,0,0,0,0.223915474239924,0,0,1.16318591023652,0.755751887377619,0,0.697287110717054,0.411167888021826,0.309706370895104,0,0.512321413058201,0.47296445977717,0,0.645484683583826,0,1.31769637679823,0.272906150057846,0.224723484445085,0.918251677112708,0,0.639337125799041,1.64925650093358,0.598390972864896,0,0.290209238628584,0,0.622822248995575,1.25624332628372,1.0429658368404,0.217188844705117,1.21079900526674,0.368277635987565,0.632924774881769,0.633765858935825,0.850417199860174,0.209658645508376,0.336985893439485,0.300353785683013,0.16072558669708,0.285012743741249,0.99458338599545,0,1.75996244461323,1.63841583378639,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.640456598628376,0.130059347559878,0.493313713811028,1.10540007114339,0.289803085735052,0,0.267540828089713,1.04535523804977,0.793165398882963,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,0,0.534880391567015,0,0,0,0.383587685530591,0,0.50133791063589,0.289693037921647,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.261958150995425,0,0,1.62273696827342,0.696518949197069,0.930705723632056,0.238490624305342,0,1.11437250398869,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,7.75560528296651,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0.421352420106746,0,0.122834317311768,0.206651562351531,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.625592599359821,0.277064115484183,0,0.919463387397059,0,0.226864366320042,0.179389635688862,0.427114777637135,0.423863802319124,0,0.309157587715317,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.302256294682921,0.67824236924195,0.57978255948989,0.545492241181669,0.286804595389004,0.121973706129595,0.397589304964456,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0.337169380156203,0,0.330881918197182,0.435758888184812,0,0.404493924480493,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,2.6487785964879,0.122988438543114,0.171567810298526,0.548751427043128,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0.925971025153221,0.380508304469197,0,0,0.246217006087397,1.40402559083543,0.891786973732369,0.93733833986777,0.671928512795438,0.567100388969546,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.264145302039678,0.207328115540772,0.144119953416961,0,0.126995788584338,0,0,0,0.308482478109971,0.600686115687835,0,0.224262168690721,0.43596006883328,0.07333828582095,0.258543431515556,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,1.74306691720059,0.799783929456456,0,1.50677127429638,0,0,1.14861935834114,0,0.723906533337896,0.205476322550383,0.358121926479791,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,5.9832291840805,0.828831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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10487 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20040 | |||
|TSSclassifier=S | |||
|UniProt=Q01518 | |||
|association_with_transcript=51bp_to_AB590394,BT007152,CR457409,CU680712,DQ890660,DQ893840_5end | |||
|coexpression_cluster_id=C62 | |||
|description=CAGE_peak_8_at_CAP1_5end | |||
|id=chr1:40525070..40525096,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.37e-11;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.72e-11,24;CL:0000826,1.72e-11,24;CL:0000738,8.29e-09,136;CL:0000785,8.98e-08,2;CL:0000955,8.98e-08,2;CL:0000818,8.98e-08,2;CL:0000954,8.98e-08,2;CL:0000816,8.98e-08,2;CL:0002087,1.85e-07,115;CL:0002031,6.04e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000954;9.16e-08;2!UBERON:0006965;6.05e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.44e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.20e-11,10 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;6.05e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.79e-07,2 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.446961094427288,1.74467704820074,0,0.631719873426831,0,0.245733936501509,0,0,0.263766978228454,0.123766352960047,0,0.672325146451775,1.20538905604795,0,0.975865597581014,0,0.408001382488506,0,0,0.136874425072884,0.251085279189606,0.764134057479513,0.492603536699674,1.02324015707783,0,0.383829398097213,0,0.919421224478927,0,0.739508020333575,27.733257807748,3.12772311472327,0.293600439334847,0,0,0,0.223915474239924,0,0,1.16318591023652,0.755751887377619,0,0.697287110717054,0.411167888021826,0.309706370895104,0,0.512321413058201,0.47296445977717,0,0.645484683583826,0,1.31769637679823,0.272906150057846,0.224723484445085,0.918251677112708,0,0.639337125799041,1.64925650093358,0.598390972864896,0,0.290209238628584,0,0.622822248995575,1.25624332628372,1.0429658368404,0.217188844705117,1.21079900526674,0.368277635987565,0.632924774881769,0.633765858935825,0.850417199860174,0.209658645508376,0.336985893439485,0.300353785683013,0.16072558669708,0.285012743741249,0.99458338599545,0,1.75996244461323,1.63841583378639,0,0.426730222566507,0.400395987036012,0.574752439954483,0,0,0,0,0.382273228125229,0,0,0.263384084775077,0,0,0.411202997999018,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0.640456598628376,0.130059347559878,0.493313713811028,1.10540007114339,0.289803085735052,0,0.267540828089713,1.04535523804977,0.793165398882963,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,0,0.534880391567015,0,0,0,0.383587685530591,0,0.50133791063589,0.289693037921647,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.263504357079378,0.261958150995425,0,0,1.62273696827342,0.696518949197069,0.930705723632056,0.238490624305342,0,1.11437250398869,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0,0,0,0,0,7.75560528296651,0,0.496971951695318,0.25326102332916,0.132409180813219,0,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0,0,0,0.149448680551801,0.469737994575059,0.323745888736263,0.421352420106746,0,0.122834317311768,0.206651562351531,0,0.494533858557114,0.910161361938026,0,0.168336113954066,0.625592599359821,0.277064115484183,0,0.919463387397059,0,0.226864366320042,0.179389635688862,0.427114777637135,0.423863802319124,0,0.309157587715317,0,0,0.168776332241266,0.194874010322397,0.252433774244115,0.0920498986422993,0,0.355009592516614,0.302256294682921,0.67824236924195,0.57978255948989,0.545492241181669,0.286804595389004,0.121973706129595,0.397589304964456,0.116193942869518,0.310983165046111,0,0.36497735907583,0,0.643240938192885,1.38134921352481,0,0,0.118306800039844,0.337169380156203,0,0.330881918197182,0.435758888184812,0,0.404493924480493,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,2.6487785964879,0.122988438543114,0.171567810298526,0.548751427043128,0,0.201057944823262,0.0925884451585296,0,0,0,0,0.117408694235822,0.144366447761074,0.925971025153221,0.380508304469197,0,0,0.246217006087397,1.40402559083543,0.891786973732369,0.93733833986777,0.671928512795438,0.567100388969546,0.0895585227028483,0.290633938513962,0.766765358330422,0,0.264145302039678,0.207328115540772,0.144119953416961,0,0.126995788584338,0,0,0,0.308482478109971,0.600686115687835,0,0.224262168690721,0.43596006883328,0.07333828582095,0.258543431515556,0,0.845302752556,0.531876233169741,1.04007436911366,0,0,0.532844358032199,0.142977993658148,0,0,0.325736184293735,0,0.791951872933429,0.602878754119172,1.74306691720059,0.799783929456456,0,1.50677127429638,0,0,1.14861935834114,0,0.723906533337896,0.205476322550383,0.358121926479791,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,0,5.9832291840805,0.828831026872071,0.12269149171914,0.500170521059677,0,0.207970861530807,1.60586089917446,0.473107245101804,0.35142424497814,0,2.27407504055985,0,0.664225598535437,0.368738337083406,0.0868836144680828,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.128139149255701,0,0.482561763430822,0,0.616838775210622,0.355123450626254,0.328508624055237,0,0.464841513839837,0,1.20303882181971,0.276242966807689,0.229628896329213,0,0.262248829918848,0,0.231046011313244,0,0,0.211103257785751,0,0.340187410553031,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0.650060246036521,1.6068392984416,0,0.616194468458578,0.15350367472613,0.275673144969061,0,0.145016693914229,0.255679882248303,0.0890320356467374,0,0.384380134730212,0.127612712494584,0.2023155617111,0.464845549297286,0,0,0,0,0,0.18532421910392,1.71749864090389,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0.636406495851874,1.56989728039846,0,0.274537029736055,0.706874414074119,0,0,0.421258456238981,0,0,1.05650146756755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| |||
|short_description=p8@CAP1 | |||
}} |
Revision as of 05:41, 12 September 2013
Short description: | p8@CAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CAP1_5end |
Coexpression cluster: | C62_Burkitt_tonsil_CD19_submaxillary_spleen_salivary_lymph |
Association with transcript: | 51bp_to_AB590394, BT007152, CR457409, CU680712, DQ890660, DQ893840_5end |
EntrezGene: | CAP1 |
HGNC: | 20040 |
UniProt: | Q01518 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.72e-11 | 24 |
pro-B cell | 1.72e-11 | 24 |
leukocyte | 8.29e-09 | 136 |
mature B cell | 8.98e-08 | 2 |
pre-B-II cell | 8.98e-08 | 2 |
transitional stage B cell | 8.98e-08 | 2 |
small pre-B-II cell | 8.98e-08 | 2 |
immature B cell | 8.98e-08 | 2 |
nongranular leukocyte | 1.85e-07 | 115 |
hematopoietic lineage restricted progenitor cell | 6.04e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 4.79e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.20e-11 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.