FFCP PHASE1:Hg19::chr1:43988983..43989012,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C289|description=CAGE_peak_at_chr1:43988983..43989012,+|id=chr1:43988983..43989012,+|ontology_enrichment_celltype=CL:0000066!9.99e-11!254;CL:0002541!9.08e-09!3;CL:0000077!4.74e-08!19;CL:0002076!8.89e-08!43|ontology_enrichment_celltype_v019=CL:0002541;2.74e-41;3!CL:0000764;6.63e-28;2!CL:0000558;6.63e-28;2!CL:0000349;1.20e-11;19|ontology_enrichment_celltype_v019_2=CL:0002541,2.94e-41,3;CL:0000764,6.20e-28,2;CL:0000765,6.20e-28,2;CL:0000050,6.20e-28,2;CL:0000038,6.20e-28,2;CL:0000558,6.20e-28,2;CL:0000547,6.20e-28,2;CL:0000549,6.20e-28,2;CL:0000550,6.20e-28,2;CL:0000552,6.20e-28,2;CL:0000349,1.20e-11,19|ontology_enrichment_development_v019=UBERON:0003124;1.72e-14;1|ontology_enrichment_disease=DOID:0050687!1.11e-08!143;DOID:14566!9.38e-07!239|ontology_enrichment_disease_v019=DOID:3111;1.72e-14;1!DOID:3603;1.72e-14;1|ontology_enrichment_disease_v019_2=DOID:3111,3.15e-14,1;DOID:3603,3.15e-14,1|ontology_enrichment_uberon=UBERON:0000476!9.08e-09!3;UBERON:0000920!9.08e-09!3|ontology_enrichment_uberon_v019=UBERON:0003124;2.74e-41;3!UBERON:0000920;2.74e-41;3!UBERON:0005631;7.49e-22;10!UBERON:0000158;7.49e-22;10!UBERON:0000478;5.77e-14;24|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.94e-41,3;UBERON:0003124,5.27e-31,7;UBERON:0005631,6.75e-24,14;UBERON:0000158,6.75e-24,14;UBERON:0000478,5.86e-14,24;UBERON:0004923,5.85e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.839910640994298,0.567100388969546,0.53735113621709,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0,0,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,2.41185864310528,3.92153176537351,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,1.91419068741876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0,0,0,0,0,0,0,0,0.755798243562828,0.20453736500431,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79515288819544,0.54323685961004,9.25103363222567,3.20591576906518,4.26427820814908,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0.330991955875499,1.56966459203613,0,0.284609546029793,0.138674673013139,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0.244736704506468,0.895444205407437,0,0.877136198314828,0.353378291891762,0.771656153083659,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,1.05656061679314,0.39997479170986,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.462102664601353,0,0,0,0,0.20170506870352,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.154348316215889,0,0,0,0,0,0,0,0.169927114687817,0,0.386747327841463,0,0,1.05868461514708,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p@chr1:43988983..43989012,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C289 | |||
|description=CAGE_peak_at_chr1:43988983..43989012,+ | |||
|id=chr1:43988983..43989012,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.99e-11!254;CL:0002541!9.08e-09!3;CL:0000077!4.74e-08!19;CL:0002076!8.89e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0002541;2.74e-41;3!CL:0000764;6.63e-28;2!CL:0000558;6.63e-28;2!CL:0000349;1.20e-11;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.94e-41,3;CL:0000764,6.20e-28,2;CL:0000765,6.20e-28,2;CL:0000050,6.20e-28,2;CL:0000038,6.20e-28,2;CL:0000558,6.20e-28,2;CL:0000547,6.20e-28,2;CL:0000549,6.20e-28,2;CL:0000550,6.20e-28,2;CL:0000552,6.20e-28,2;CL:0000349,1.20e-11,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.72e-14;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.11e-08!143;DOID:14566!9.38e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3111;1.72e-14;1!DOID:3603;1.72e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,3.15e-14,1;DOID:3603,3.15e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!9.08e-09!3;UBERON:0000920!9.08e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;2.74e-41;3!UBERON:0000920;2.74e-41;3!UBERON:0005631;7.49e-22;10!UBERON:0000158;7.49e-22;10!UBERON:0000478;5.77e-14;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.94e-41,3;UBERON:0003124,5.27e-31,7;UBERON:0005631,6.75e-24,14;UBERON:0000158,6.75e-24,14;UBERON:0000478,5.86e-14,24;UBERON:0004923,5.85e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0.839910640994298,0.567100388969546,0.53735113621709,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.40101294060657,0,0,0,0,0,0,0,0,0.422206515571503,0,0,0,0,0,0,0,0,0,2.41185864310528,3.92153176537351,0,0.328014645699706,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,1.91419068741876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0.540031437238115,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0,0,0,0,0,0,0,0,0,0.755798243562828,0.20453736500431,0,0,0.718946809178615,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79515288819544,0.54323685961004,9.25103363222567,3.20591576906518,4.26427820814908,0,0,0,0.225595660617181,0.19606253431774,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0.330991955875499,1.56966459203613,0,0.284609546029793,0.138674673013139,0,0,0,0,0,0,0.219267951258557,0.0821154570532092,0,0,0,0.137041924646751,0,0,0,0.160317640503067,0,0,0,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767660789277781,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.57785949122191,0,0,0,0,0.244736704506468,0.895444205407437,0,0.877136198314828,0.353378291891762,0.771656153083659,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,1.05656061679314,0.39997479170986,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.462102664601353,0,0,0,0,0.20170506870352,0,0,0,0.591424344868181,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,1.33053555243958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170426809518315,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0,0.301925687133347,0.154348316215889,0,0,0,0,0,0,0,0.169927114687817,0,0.386747327841463,0,0,1.05868461514708,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0.426467963801962,0,0,0,0.224263725161227,0,0,0,0,0,0.0717222053926763,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:43988983..43989012,+ | |||
}} |
Revision as of 05:50, 12 September 2013
Short description: | p@chr1:43988983..43989012, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:43988983..43989012, + |
Coexpression cluster: | C289_chorionic_skeletal_heart_Mast_amniotic_granulosa_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.94e-41 | 3 |
erythroid lineage cell | 6.20e-28 | 2 |
erythroblast | 6.20e-28 | 2 |
megakaryocyte-erythroid progenitor cell | 6.20e-28 | 2 |
erythroid progenitor cell | 6.20e-28 | 2 |
reticulocyte | 6.20e-28 | 2 |
proerythroblast | 6.20e-28 | 2 |
basophilic erythroblast | 6.20e-28 | 2 |
polychromatophilic erythroblast | 6.20e-28 | 2 |
orthochromatic erythroblast | 6.20e-28 | 2 |
extraembryonic cell | 1.20e-11 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.94e-41 | 3 |
chorion | 5.27e-31 | 7 |
extraembryonic membrane | 6.75e-24 | 14 |
membranous layer | 6.75e-24 | 14 |
extraembryonic structure | 5.86e-14 | 24 |
organ component layer | 5.85e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 3.15e-14 | 1 |
mucinous cystadenocarcinoma | 3.15e-14 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.