FFCP PHASE1:Hg19::chr21:9829088..9829099,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr21:9829088..9829099,+|id=chr21:9829088..9829099,+|ontology_enrichment_celltype=CL:0000039!2.03e-21!7;CL:0000586!2.03e-21!7|ontology_enrichment_celltype_v019=CL:0000039;2.96e-45;7!CL:0000586;2.96e-45;7!CL:0000333;1.03e-16;5|ontology_enrichment_celltype_v019_2=CL:0000039,2.23e-45,7;CL:0000586,2.23e-45,7|ontology_enrichment_development_v019=UBERON:0009117;7.66e-09;10!UBERON:0005564;7.66e-09;10|ontology_enrichment_disease=DOID:3095!1.14e-28!22;DOID:2994!1.14e-28!22;DOID:0050687!4.56e-23!143;DOID:14566!3.52e-19!239;DOID:162!1.43e-18!235;DOID:171!5.85e-14!10;DOID:305!1.15e-11!106;DOID:169!4.90e-11!6|ontology_enrichment_disease_v019=DOID:3095;4.35e-32;22!DOID:2994;4.35e-32;22!DOID:169;4.24e-14;6!DOID:3193;3.52e-11;2!DOID:962;3.52e-11;2!DOID:171;7.66e-09;10!DOID:1192;7.02e-08;3|ontology_enrichment_disease_v019_2=DOID:3095,4.01e-32,22;DOID:2994,4.01e-32,22;DOID:169,4.53e-14,6;DOID:3193,4.52e-11,2;DOID:962,4.52e-11,2;DOID:0050687,7.86e-11,143;DOID:171,7.96e-09,10;DOID:1192,8.29e-08,3|ontology_enrichment_uberon=UBERON:0000013!5.72e-08!5;UBERON:0002410!5.72e-08!5;UBERON:0000010!2.89e-07!8|ontology_enrichment_uberon_v019=UBERON:0000013;1.03e-16;5!UBERON:0002410;1.03e-16;5!UBERON:0003714;3.52e-11;2!UBERON:0000473;8.06e-11;8!UBERON:0000010;1.01e-09;8!UBERON:0003135;4.04e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.12e-16,5;UBERON:0002410,1.12e-16,5;UBERON:0003714,4.52e-11,2;UBERON:0000473,8.47e-11,8;UBERON:0000010,1.05e-09,8;UBERON:0003135,4.18e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.980160863924127,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,1.38338342632836,2.69272933229316,0.217294743844016,0,0,0,0,0,0,0,0,0,0.75901493089674,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,1.19472429772959,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993573058514948,0,0,0.320635281006135,0,0.39961921916426,0,0,2.4023299700675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,2.36225955635397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,1.25812753484717,0,0.509197589862076,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,4.0341013740704,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.218531143927391,0,0.917899467677836,0,1.19463369395298,1.25353769646188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr21:9829088..9829099,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr21:9829088..9829099,+ | |||
|id=chr21:9829088..9829099,+ | |||
|ontology_enrichment_celltype=CL:0000039!2.03e-21!7;CL:0000586!2.03e-21!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;2.96e-45;7!CL:0000586;2.96e-45;7!CL:0000333;1.03e-16;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.23e-45,7;CL:0000586,2.23e-45,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.66e-09;10!UBERON:0005564;7.66e-09;10 | |||
|ontology_enrichment_disease=DOID:3095!1.14e-28!22;DOID:2994!1.14e-28!22;DOID:0050687!4.56e-23!143;DOID:14566!3.52e-19!239;DOID:162!1.43e-18!235;DOID:171!5.85e-14!10;DOID:305!1.15e-11!106;DOID:169!4.90e-11!6 | |||
|ontology_enrichment_disease_v019=DOID:3095;4.35e-32;22!DOID:2994;4.35e-32;22!DOID:169;4.24e-14;6!DOID:3193;3.52e-11;2!DOID:962;3.52e-11;2!DOID:171;7.66e-09;10!DOID:1192;7.02e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.01e-32,22;DOID:2994,4.01e-32,22;DOID:169,4.53e-14,6;DOID:3193,4.52e-11,2;DOID:962,4.52e-11,2;DOID:0050687,7.86e-11,143;DOID:171,7.96e-09,10;DOID:1192,8.29e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0000013!5.72e-08!5;UBERON:0002410!5.72e-08!5;UBERON:0000010!2.89e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.03e-16;5!UBERON:0002410;1.03e-16;5!UBERON:0003714;3.52e-11;2!UBERON:0000473;8.06e-11;8!UBERON:0000010;1.01e-09;8!UBERON:0003135;4.04e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.12e-16,5;UBERON:0002410,1.12e-16,5;UBERON:0003714,4.52e-11,2;UBERON:0000473,8.47e-11,8;UBERON:0000010,1.05e-09,8;UBERON:0003135,4.18e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,0,0.980160863924127,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,1.38338342632836,2.69272933229316,0.217294743844016,0,0,0,0,0,0,0,0,0,0.75901493089674,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728341138602278,0,0,0,0,0,0,0,0,0,1.19472429772959,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993573058514948,0,0,0.320635281006135,0,0.39961921916426,0,0,2.4023299700675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0.0674035438541849,2.36225955635397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0.138348634936231,0,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,1.25812753484717,0,0.509197589862076,0,0,1.11728983594649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,4.0341013740704,0,0.523813388962845,0,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.671132590786754,0,0,0,0,0,0,0,0,0.237840181555137,0,0,0,0,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.218531143927391,0,0.917899467677836,0,1.19463369395298,1.25353769646188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr21:9829088..9829099,+ | |||
}} |
Revision as of 10:53, 12 September 2013
Short description: | p@chr21:9829088..9829099, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr21:9829088..9829099, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.23e-45 | 7 |
germ cell | 2.23e-45 | 7 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.12e-16 | 5 |
autonomic nervous system | 1.12e-16 | 5 |
neural tissue | 4.52e-11 | 2 |
testis | 8.47e-11 | 8 |
peripheral nervous system | 1.05e-09 | 8 |
male reproductive organ | 4.18e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.01e-32 | 22 |
germ cell cancer | 4.01e-32 | 22 |
neuroendocrine tumor | 4.53e-14 | 6 |
peripheral nerve sheath neoplasm | 4.52e-11 | 2 |
neurofibroma | 4.52e-11 | 2 |
cell type cancer | 7.86e-11 | 143 |
neuroectodermal tumor | 7.96e-09 | 10 |
peripheral nervous system neoplasm | 8.29e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.