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UBERON:0003714

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Name:neural tissue
Namespace:FANTOM
Definition:"Portion of tissue which consists of neurons, neuroglia and vasculature. Examples: Neural tissue of brain, neural tissue of peripheral ganglion, neural tissue of nerve[FMA]." [FMA:9642]
Xrefs:
links:

AAO:0000325
AEO:0000123
EHDAA2:0003123
FMA:9642
GAID:609
MESH:A.08.561
ncithesaurus:Nervous_Tissue
OpenCyc:Mx4rVmfYCsQ_QdeM_bFAeS8NRQ

SCTID:91728009
Synonyms: "nerve tissue" EXACT [FMA:9642]
"nervous tissue" EXACT [FMA:9642]
"portion of neural tissue" EXACT [FMA:9642]
Comments:FMA definition includes vasculature

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000479(tissue)
disjoint_from:UBERON:0004755(skeletal tissue)
part_of:UBERON:0001016(nervous system)



Children

is a:UBERON:0000045 (ganglion),UBERON:0001810 (nerve plexus)
disjoint from:UBERON:0001013 (adipose tissue),UBERON:0002385 (muscle tissue)
derives from:FF:0102912 (neuroepithelioma cell line sample)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003714 (neural tissue), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
1.75e-130FFCP PHASE1:Hg19::chr2:212586166..212586168,-#_f779dacc1bc39f297c035798afc856a8p@chr2:212586166..212586168, -
1.75e-130FFCP PHASE2:Hg19::chr2:212586166..212586168,-#_f779dacc1bc39f297c035798afc856a8p@chr2:212586166..212586168, -
1.55e-98FFCP PHASE2:Hg19::chr12:57628762..57628773,-#_33bae9ebb65e06dd32204f9d07c666edp@chr12:57628762..57628773, -
1.55e-98FFCP PHASE1:Hg19::chr1:21339635..21339636,-#_33bae9ebb65e06dd32204f9d07c666edp@chr1:21339635..21339636, -
1.55e-98FFCP PHASE2:Hg19::chr1:21339635..21339636,-#_33bae9ebb65e06dd32204f9d07c666edp@chr1:21339635..21339636, -
1.55e-98FFCP PHASE1:Hg19::chr12:57628762..57628773,-#_33bae9ebb65e06dd32204f9d07c666edp@chr12:57628762..57628773, -
5.22e-79FFCP PHASE2:Hg19::chr8:6081804..6081807,-#_dee53416bc5436e6f221e2232f8b2f4ep@chr8:6081804..6081807, -
5.22e-79FFCP PHASE1:Hg19::chr8:6081804..6081807,-#_dee53416bc5436e6f221e2232f8b2f4ep@chr8:6081804..6081807, -
2.03e-66FFCP PHASE2:Hg19::chr8:27057116..27057118,+#_c6b72cfb226974d668817d576171e1fdp@chr8:27057116..27057118, +
2.03e-66FFCP PHASE1:Hg19::chr8:27057116..27057118,+#_c6b72cfb226974d668817d576171e1fdp@chr8:27057116..27057118, +
2.84e-66FFCP PHASE2:Hg19::chr11:16629621..16629629,-#_d1c0458216e37842ef4be6df0ef9a4cdp30@SOX6
2.84e-66FFCP PHASE1:Hg19::chr11:16629621..16629629,-#_d1c0458216e37842ef4be6df0ef9a4cdp30@SOX6
7.73e-66FFCP PHASE2:Hg19::chr2:29703653..29703657,-#_0e13d118c9c2d633aa8057d83f337821p@chr2:29703653..29703657, -
7.73e-66FFCP PHASE1:Hg19::chr2:29703653..29703657,-#_0e13d118c9c2d633aa8057d83f337821p@chr2:29703653..29703657, -
2.0e-56FFCP PHASE1:Hg19::chr11:126010526..126010554,-#_521b9313f370a70b37dd4e806affe7c9p@chr11:126010526..126010554, -
2.0e-56FFCP PHASE2:Hg19::chr11:126010526..126010554,-#_521b9313f370a70b37dd4e806affe7c9p@chr11:126010526..126010554, -
2.74e-50FFCP PHASE2:Hg19::chr1:22696471..22696505,-#_6bc149423710c074798d272d1b1e2e53p@chr1:22696471..22696505, -
2.74e-50FFCP PHASE2:Hg19::chr18:74702556..74702558,-#_6bc149423710c074798d272d1b1e2e53p@chr18:74702556..74702558, -
2.74e-50FFCP PHASE1:Hg19::chr4:127394496..127394500,-#_6bc149423710c074798d272d1b1e2e53p@chr4:127394496..127394500, -
2.74e-50FFCP PHASE2:Hg19::chr18:25161980..25161984,-#_6bc149423710c074798d272d1b1e2e53p@chr18:25161980..25161984, -
2.74e-50FFCP PHASE2:Hg19::chr4:127394496..127394500,-#_6bc149423710c074798d272d1b1e2e53p@chr4:127394496..127394500, -
2.74e-50FFCP PHASE2:Hg19::chr14:105807545..105807554,+#_6bc149423710c074798d272d1b1e2e53p@chr14:105807545..105807554, +
2.74e-50FFCP PHASE2:Hg19::chr8:37824442..37824447,-#_6bc149423710c074798d272d1b1e2e53p9@ADRB3
2.74e-50FFCP PHASE1:Hg19::chr8:37824442..37824447,-#_6bc149423710c074798d272d1b1e2e53p9@ADRB3
2.74e-50FFCP PHASE1:Hg19::chr18:74702556..74702558,-#_6bc149423710c074798d272d1b1e2e53p@chr18:74702556..74702558, -
2.74e-50FFCP PHASE2:Hg19::chr5:149250331..149250335,-#_6bc149423710c074798d272d1b1e2e53p@chr5:149250331..149250335, -
2.74e-50FFCP PHASE1:Hg19::chr2:188432107..188432111,+#_6bc149423710c074798d272d1b1e2e53p@chr2:188432107..188432111, +
2.74e-50FFCP PHASE1:Hg19::chr5:149250331..149250335,-#_6bc149423710c074798d272d1b1e2e53p@chr5:149250331..149250335, -
2.74e-50FFCP PHASE2:Hg19::chr7:15056365..15056368,-#_6bc149423710c074798d272d1b1e2e53p@chr7:15056365..15056368, -
2.74e-50FFCP PHASE2:Hg19::chr8:12808791..12808798,+#_6bc149423710c074798d272d1b1e2e53p28@KIAA1456
2.74e-50FFCP PHASE2:Hg19::chr5:151258901..151258902,+#_6bc149423710c074798d272d1b1e2e53p@chr5:151258901..151258902, +
2.74e-50FFCP PHASE1:Hg19::chr7:15056365..15056368,-#_6bc149423710c074798d272d1b1e2e53p@chr7:15056365..15056368, -
2.74e-50FFCP PHASE1:Hg19::chr5:151258901..151258902,+#_6bc149423710c074798d272d1b1e2e53p@chr5:151258901..151258902, +
2.74e-50FFCP PHASE1:Hg19::chr18:25161980..25161984,-#_6bc149423710c074798d272d1b1e2e53p@chr18:25161980..25161984, -
2.74e-50FFCP PHASE1:Hg19::chr8:12808791..12808798,+#_6bc149423710c074798d272d1b1e2e53p28@KIAA1456
2.74e-50FFCP PHASE2:Hg19::chr2:188432107..188432111,+#_6bc149423710c074798d272d1b1e2e53p@chr2:188432107..188432111, +
2.74e-50FFCP PHASE1:Hg19::chr1:62928606..62928608,+#_6bc149423710c074798d272d1b1e2e53p@chr1:62928606..62928608, +
2.74e-50FFCP PHASE1:Hg19::chr2:60133192..60133194,-#_6bc149423710c074798d272d1b1e2e53p@chr2:60133192..60133194, -
2.74e-50FFCP PHASE1:Hg19::chr14:105807545..105807554,+#_6bc149423710c074798d272d1b1e2e53p@chr14:105807545..105807554, +
2.74e-50FFCP PHASE2:Hg19::chr1:62928606..62928608,+#_6bc149423710c074798d272d1b1e2e53p@chr1:62928606..62928608, +
2.74e-50FFCP PHASE1:Hg19::chr1:22696471..22696505,-#_6bc149423710c074798d272d1b1e2e53p@chr1:22696471..22696505, -
2.74e-50FFCP PHASE2:Hg19::chr2:60133192..60133194,-#_6bc149423710c074798d272d1b1e2e53p@chr2:60133192..60133194, -
4.52e-50FFCP PHASE1:Hg19::chr19:35978717..35978722,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr19:35978717..35978722, -
4.52e-50FFCP PHASE2:Hg19::chr14:68527802..68527806,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr14:68527802..68527806, +
4.52e-50FFCP PHASE2:Hg19::chr16:19586229..19586233,+#_9b72837bdb72ff9efe1143abbdbacba2p12@C16orf62
4.52e-50FFCP PHASE2:Hg19::chr16:55740953..55740956,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr16:55740953..55740956, +
4.52e-50FFCP PHASE1:Hg19::chr17:39023472..39023477,-#_9b72837bdb72ff9efe1143abbdbacba2p1@KRT12
4.52e-50FFCP PHASE2:Hg19::chr19:48479835..48479841,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr19:48479835..48479841, -
4.52e-50FFCP PHASE1:Hg19::chr4:139501766..139501798,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr4:139501766..139501798, -
4.52e-50FFCP PHASE1:Hg19::chr14:37227792..37227796,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr14:37227792..37227796, -
4.52e-50FFCP PHASE2:Hg19::chr2:97626726..97626741,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr2:97626726..97626741, +
4.52e-50FFCP PHASE1:Hg19::chr3:77060783..77060789,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr3:77060783..77060789, +
4.52e-50FFCP PHASE1:Hg19::chr3:39827273..39827281,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr3:39827273..39827281, +
4.52e-50FFCP PHASE1:Hg19::chr4:188536760..188536764,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr4:188536760..188536764, -
4.52e-50FFCP PHASE1:Hg19::chr6:16317123..16317126,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr6:16317123..16317126, +
4.52e-50FFCP PHASE2:Hg19::chr12:296753..296755,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr12:296753..296755, -
4.52e-50FFCP PHASE1:Hg19::chr2:240176859..240176904,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr2:240176859..240176904, -
4.52e-50FFCP PHASE2:Hg19::chr2:171939999..171940009,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr2:171939999..171940009, -
4.52e-50FFCP PHASE2:Hg19::chr7:88535666..88535671,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr7:88535666..88535671, +
4.52e-50FFCP PHASE1:Hg19::chr19:20382476..20382481,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr19:20382476..20382481, -
4.52e-50FFCP PHASE2:Hg19::chrX:52006984..52006993,+#_9b72837bdb72ff9efe1143abbdbacba2p@chrX:52006984..52006993, +
4.52e-50FFCP PHASE2:Hg19::chr6:16317123..16317126,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr6:16317123..16317126, +
4.52e-50FFCP PHASE2:Hg19::chr2:242742205..242742253,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr2:242742205..242742253, +
4.52e-50FFCP PHASE2:Hg19::chr6:104346803..104346806,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr6:104346803..104346806, -
4.52e-50FFCP PHASE1:Hg19::chr7:88535666..88535671,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr7:88535666..88535671, +
4.52e-50FFCP PHASE1:Hg19::chrX:52006984..52006993,+#_9b72837bdb72ff9efe1143abbdbacba2p@chrX:52006984..52006993, +
4.52e-50FFCP PHASE1:Hg19::chr6:104346803..104346806,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr6:104346803..104346806, -
4.52e-50FFCP PHASE2:Hg19::chr19:35978717..35978722,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr19:35978717..35978722, -
4.52e-50FFCP PHASE2:Hg19::chr4:139501766..139501798,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr4:139501766..139501798, -
4.52e-50FFCP PHASE1:Hg19::chr3:131712314..131712315,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr3:131712314..131712315, -
4.52e-50FFCP PHASE1:Hg19::chr2:30144229..30144240,-#_9b72837bdb72ff9efe1143abbdbacba2p10@ALK
4.52e-50FFCP PHASE2:Hg19::chrX:131884370..131884375,-#_9b72837bdb72ff9efe1143abbdbacba2p@chrX:131884370..131884375, -
4.52e-50FFCP PHASE1:Hg19::chr1:169073323..169073334,+#_9b72837bdb72ff9efe1143abbdbacba2p4@ENST00000415637
4.52e-50FFCP PHASE2:Hg19::chr17:12935401..12935405,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr17:12935401..12935405, -
4.52e-50FFCP PHASE1:Hg19::chr10:62149979..62149980,-#_9b72837bdb72ff9efe1143abbdbacba2p59@ANK3
4.52e-50FFCP PHASE2:Hg19::chr14:78718132..78718157,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr14:78718132..78718157, +
4.52e-50FFCP PHASE1:Hg19::chrX:131884370..131884375,-#_9b72837bdb72ff9efe1143abbdbacba2p@chrX:131884370..131884375, -
4.52e-50FFCP PHASE1:Hg19::chr11:2435409..2435443,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr11:2435409..2435443, -
4.52e-50FFCP PHASE2:Hg19::chr3:77060783..77060789,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr3:77060783..77060789, +
4.52e-50FFCP PHASE2:Hg19::chr11:20791058..20791067,+#_9b72837bdb72ff9efe1143abbdbacba2p10@NELL1
4.52e-50FFCP PHASE2:Hg19::chr4:188536760..188536764,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr4:188536760..188536764, -
4.52e-50FFCP PHASE2:Hg19::chr14:76447439..76447452,-#_9b72837bdb72ff9efe1143abbdbacba2p18@TGFB3
4.52e-50FFCP PHASE1:Hg19::chr15:69850503..69850506,+#_9b72837bdb72ff9efe1143abbdbacba2p3@ENST00000558781
4.52e-50FFCP PHASE2:Hg19::chr3:39827273..39827281,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr3:39827273..39827281, +
4.52e-50FFCP PHASE1:Hg19::chr1:86911063..86911068,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr1:86911063..86911068, +
4.52e-50FFCP PHASE1:Hg19::chr1:44991346..44991355,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr1:44991346..44991355, +
4.52e-50FFCP PHASE2:Hg19::chr14:68589926..68589929,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr14:68589926..68589929, +
4.52e-50FFCP PHASE1:Hg19::chr17:47107522..47107524,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr17:47107522..47107524, +
4.52e-50FFCP PHASE2:Hg19::chr2:30144229..30144240,-#_9b72837bdb72ff9efe1143abbdbacba2p10@ALK
4.52e-50FFCP PHASE1:Hg19::chr2:165170873..165170919,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr2:165170873..165170919, -
4.52e-50FFCP PHASE2:Hg19::chr11:57030314..57030346,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr11:57030314..57030346, +
4.52e-50FFCP PHASE2:Hg19::chr2:240176859..240176904,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr2:240176859..240176904, -
4.52e-50FFCP PHASE2:Hg19::chr15:36402459..36402465,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr15:36402459..36402465, -
4.52e-50FFCP PHASE2:Hg19::chr19:20382476..20382481,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr19:20382476..20382481, -
4.52e-50FFCP PHASE1:Hg19::chr14:85119696..85119699,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr14:85119696..85119699, +
4.52e-50FFCP PHASE1:Hg19::chr4:139590958..139590961,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr4:139590958..139590961, -
4.52e-50FFCP PHASE2:Hg19::chr1:169073323..169073334,+#_9b72837bdb72ff9efe1143abbdbacba2p4@ENST00000415637
4.52e-50FFCP PHASE1:Hg19::chr1:66713214..66713221,+#_9b72837bdb72ff9efe1143abbdbacba2p@chr1:66713214..66713221, +
4.52e-50FFCP PHASE1:Hg19::chr11:30166055..30166059,-#_9b72837bdb72ff9efe1143abbdbacba2p@chr11:30166055..30166059, -
4.52e-50FFCP PHASE1:Hg19::chr16:70563415..70563420,+#_9b72837bdb72ff9efe1143abbdbacba2p4@SNORD111B










Property "Property value" (as page type) with input value "UBPROP:0000001 "One of the four types of tissue in traditional classifications. Cells forming the brain, spinal cord and peripheral nervous system.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.