FFCP PHASE1:Hg19::chr2:189876664..189876675,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=|TSSclassifier=S|UniProt=Q9H394|association_with_transcript=35bp_to_AF130082_5end|coexpression_cluster_id=C292|description=CAGE_peak_10_at_AF130082_5end|id=chr2:189876664..189876675,+|ontology_enrichment_celltype=CL:0000055!2.03e-16!180;CL:0000680!1.63e-11!57;CL:0000056!1.63e-11!57;CL:0000355!1.63e-11!57;CL:0000187!3.78e-11!54;CL:0000183!2.48e-10!59;CL:0000057!3.03e-10!75;CL:0000393!4.42e-09!60;CL:0000211!4.42e-09!60;CL:0000048!2.17e-07!430;CL:0000723!6.90e-07!436;CL:0000192!8.29e-07!42;CL:0000514!8.29e-07!42|ontology_enrichment_celltype_v019=CL:0000632;1.32e-10;3!CL:0002579;3.68e-10;3!CL:0002195;1.83e-07;2!CL:0002571;1.83e-07;2!CL:0002617;4.76e-07;2|ontology_enrichment_celltype_v019_2=CL:0000632,9.72e-11,3;CL:0002579,5.33e-10,3;CL:0000136,2.83e-09,15;CL:0002195,1.96e-07,2;CL:0002571,1.96e-07,2;CL:0002617,3.84e-07,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!5.39e-08!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001134!2.91e-12!61;UBERON:0002036!2.91e-12!61;UBERON:0003082!2.91e-12!61;UBERON:0002385!2.96e-12!63;UBERON:0001015!2.96e-12!63;UBERON:0000383!2.96e-12!63;UBERON:0000914!4.79e-11!83;UBERON:0002329!4.79e-11!83;UBERON:0003077!4.79e-11!83;UBERON:0003059!4.79e-11!83;UBERON:0007282!4.79e-11!83;UBERON:0009618!4.79e-11!83;UBERON:0007285!4.79e-11!83;UBERON:0004290!1.52e-10!70;UBERON:0005256!2.42e-10!143;UBERON:0002100!6.32e-09!216;UBERON:0000486!1.16e-08!82;UBERON:0003688!4.10e-07!6;UBERON:0002358!4.10e-07!6;UBERON:0003684!4.10e-07!6;UBERON:0001178!4.10e-07!6;UBERON:0000478!9.35e-07!24|ontology_enrichment_uberon_v019=UBERON:0003688;6.91e-13;6!UBERON:0002358;6.91e-13;6!UBERON:0003684;6.91e-13;6!UBERON:0001178;6.91e-13;6!UBERON:0004457;1.74e-08;9!UBERON:0000042;1.74e-08;9!UBERON:0000922;5.47e-08;49|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.24e-12,6;UBERON:0002358,1.24e-12,6;UBERON:0003684,1.24e-12,6;UBERON:0001178,1.24e-12,6|phase1_expression=1.99846217197612,1.07050261945492,1.55049844505568,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0,0,0,0.655324116390517,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,1.34140171940727,0.255725123687061,1.44575660953827,0.50133791063589,0.289693037921647,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.662045904066094,1.72101972449288,0,0.560677600142307,0,0,0,0,0,2.11900398702904,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0,1.18800285728205,0.494533858557114,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0,0.300476117813194,0,0.538168907066586,0.640672166455702,1.27159140695737,0,0.103052529238439,0.515281080091258,0.558350568994769,0.337552664482532,0.194874010322397,0,0.736399189138395,0.484938170456436,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80980402060889,0,2.535908257668,1.06375246633948,0,0.257207374262142,0,0,1.28680194292333,7.05408087008876,0.823240336780769,0.325736184293735,3.19852753868291,0,0.602878754119172,0,0.599837947092342,0,0,0,1.19812427745791,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,3.11956292296211,1.42743191037729,0.788512075169673,1.05427273493442,0.902838299183157,0,1.03473071292505,0,0.368738337083406,0.260650843404249,1.17480694477644,0,0,0,0,0,1.66435439510497,0.30239029332968,0.496215615637554,0.767309866440312,1.68396056659844,3.45975702990393,1.02341449813341,1.44768529029247,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.68888668898764,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.462145851343933,0,0.137836572484531,0.751941714077915,0.580066775656914,0.170453254832202,0.890320356467374,0,0,0,0,0,2.51849877464512,0,0.616067160352178,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.953150969619124,0,5.13526785640705,0.318203247925937,0,1.61885211824983,0.823611089208164,0.353437207037059,0.808729926293264,0,0.842516912477962,0.48763373908959,0.731140468893853,0,0.682499557039929,1.1312434556297,1.13008116620243,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0.982490410131212,0.35667105148125,0,0.422215270595328,0.329294892959902,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.593929361665277,0.921482106297696,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.569710279235006,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,3.05515072466813,0,0,0,0,5.61804353109152,0,0,0,0,0,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,6.48539790376326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,2.3854323049959,0,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,0,0,0.251567901752575,0.889811221596536,0,0.604923695052956,0.466311601748341,0.147855149989634,0.159296767163702,0.449803112163605,0.621051827505038,1.24411862352257,0,0.521745061811734,2.85489457094715,1.90402606084398,0.406870733204662,0.363697318405119,0.214821114084977,0.464033759878494,0.398095888698616,0,2.40376993627955,1.6837474438296,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,14.6105395281519,0,0,0.142953088353313,0,0.348724276104376,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95888658802919,15.5427517778925,0,0,0.237840181555137,0,0,0,0.154348316215889,1.09279780251979,0,0,0,0,0,4.6492130034174,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,2.23197010900051,0.462175628631418,2.59575937274273,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,4.52322419781107,0,0.124149428591716,0,0,3.63810940124795,0.217716747896961,1.02669990325584,0,0,4.65724499164419,0,0,0,0,9.38563769613817,0.366724332548599,6.10344267473608,0,0,0|short_description=p10@AF130082}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt=Q9H394 | |||
|association_with_transcript=35bp_to_AF130082_5end | |||
|coexpression_cluster_id=C292 | |||
|description=CAGE_peak_10_at_AF130082_5end | |||
|id=chr2:189876664..189876675,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.03e-16!180;CL:0000680!1.63e-11!57;CL:0000056!1.63e-11!57;CL:0000355!1.63e-11!57;CL:0000187!3.78e-11!54;CL:0000183!2.48e-10!59;CL:0000057!3.03e-10!75;CL:0000393!4.42e-09!60;CL:0000211!4.42e-09!60;CL:0000048!2.17e-07!430;CL:0000723!6.90e-07!436;CL:0000192!8.29e-07!42;CL:0000514!8.29e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000632;1.32e-10;3!CL:0002579;3.68e-10;3!CL:0002195;1.83e-07;2!CL:0002571;1.83e-07;2!CL:0002617;4.76e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,9.72e-11,3;CL:0002579,5.33e-10,3;CL:0000136,2.83e-09,15;CL:0002195,1.96e-07,2;CL:0002571,1.96e-07,2;CL:0002617,3.84e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!5.39e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!2.91e-12!61;UBERON:0002036!2.91e-12!61;UBERON:0003082!2.91e-12!61;UBERON:0002385!2.96e-12!63;UBERON:0001015!2.96e-12!63;UBERON:0000383!2.96e-12!63;UBERON:0000914!4.79e-11!83;UBERON:0002329!4.79e-11!83;UBERON:0003077!4.79e-11!83;UBERON:0003059!4.79e-11!83;UBERON:0007282!4.79e-11!83;UBERON:0009618!4.79e-11!83;UBERON:0007285!4.79e-11!83;UBERON:0004290!1.52e-10!70;UBERON:0005256!2.42e-10!143;UBERON:0002100!6.32e-09!216;UBERON:0000486!1.16e-08!82;UBERON:0003688!4.10e-07!6;UBERON:0002358!4.10e-07!6;UBERON:0003684!4.10e-07!6;UBERON:0001178!4.10e-07!6;UBERON:0000478!9.35e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;6.91e-13;6!UBERON:0002358;6.91e-13;6!UBERON:0003684;6.91e-13;6!UBERON:0001178;6.91e-13;6!UBERON:0004457;1.74e-08;9!UBERON:0000042;1.74e-08;9!UBERON:0000922;5.47e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.24e-12,6;UBERON:0002358,1.24e-12,6;UBERON:0003684,1.24e-12,6;UBERON:0001178,1.24e-12,6 | |||
|phase1_expression=1.99846217197612,1.07050261945492,1.55049844505568,1.0007329835313,0.446961094427288,1.74467704820074,0,0,0,0,0,0.655324116390517,0.263766978228454,0.37129905888014,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,1.34140171940727,0.255725123687061,1.44575660953827,0.50133791063589,0.289693037921647,0,1.94653948121054,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0.662045904066094,1.72101972449288,0,0.560677600142307,0,0,0,0,0,2.11900398702904,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0.204154171254893,0.122834317311768,0,1.18800285728205,0.494533858557114,0,0.718618141816238,0.168336113954066,0,0,0.438977620880838,0,0.300476117813194,0,0.538168907066586,0.640672166455702,1.27159140695737,0,0.103052529238439,0.515281080091258,0.558350568994769,0.337552664482532,0.194874010322397,0,0.736399189138395,0.484938170456436,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80980402060889,0,2.535908257668,1.06375246633948,0,0.257207374262142,0,0,1.28680194292333,7.05408087008876,0.823240336780769,0.325736184293735,3.19852753868291,0,0.602878754119172,0,0.599837947092342,0,0,0,1.19812427745791,0,0,0.144781306667579,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0,0,3.11956292296211,1.42743191037729,0.788512075169673,1.05427273493442,0.902838299183157,0,1.03473071292505,0,0.368738337083406,0.260650843404249,1.17480694477644,0,0,0,0,0,1.66435439510497,0.30239029332968,0.496215615637554,0.767309866440312,1.68396056659844,3.45975702990393,1.02341449813341,1.44768529029247,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.120859449591622,0,0,0.68888668898764,0.364182336013434,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0.290012154876366,0.462145851343933,0,0.137836572484531,0.751941714077915,0.580066775656914,0.170453254832202,0.890320356467374,0,0,0,0,0,2.51849877464512,0,0.616067160352178,0,0.869932992075073,0.18532421910392,0.143124886741991,0,0,0.953150969619124,0,5.13526785640705,0.318203247925937,0,1.61885211824983,0.823611089208164,0.353437207037059,0.808729926293264,0,0.842516912477962,0.48763373908959,0.731140468893853,0,0.682499557039929,1.1312434556297,1.13008116620243,0,0,0,0,0,0.405820753925408,0,0,0.143411352204052,0.982490410131212,0.35667105148125,0,0.422215270595328,0.329294892959902,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.47748896947538,0.593929361665277,0.921482106297696,0,0,0,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0.569710279235006,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,3.05515072466813,0,0,0,0,5.61804353109152,0,0,0,0,0,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407712618220842,0.418411385249333,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268733889946905,6.48539790376326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0,2.3854323049959,0,0,1.32506888912221,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.597019211547496,0.467426619694449,0,0,0.251567901752575,0.889811221596536,0,0.604923695052956,0.466311601748341,0.147855149989634,0.159296767163702,0.449803112163605,0.621051827505038,1.24411862352257,0,0.521745061811734,2.85489457094715,1.90402606084398,0.406870733204662,0.363697318405119,0.214821114084977,0.464033759878494,0.398095888698616,0,2.40376993627955,1.6837474438296,0,0.192619830407303,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954013051960256,0,0,0.705351887381368,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0,0,0,0,0,0,0.078493092850514,0,0,14.6105395281519,0,0,0.142953088353313,0,0.348724276104376,0,1.60342272946051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95888658802919,15.5427517778925,0,0,0.237840181555137,0,0,0,0.154348316215889,1.09279780251979,0,0,0,0,0,4.6492130034174,0,0,0.193373663920732,0,0,0,0,0.730336388246517,0,0,0,0,0,1.0580536810308,2.23197010900051,0.462175628631418,2.59575937274273,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,4.52322419781107,0,0.124149428591716,0,0,3.63810940124795,0.217716747896961,1.02669990325584,0,0,4.65724499164419,0,0,0,0,9.38563769613817,0.366724332548599,6.10344267473608,0,0,0 | |||
|short_description=p10@AF130082 | |||
}} |
Revision as of 15:39, 12 September 2013
Short description: | p10@AF130082 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_AF130082_5end |
Coexpression cluster: | C292_Mesenchymal_skin_umbilical_Adipocyte_mesenchymal_Chondrocyte_skeletal |
Association with transcript: | 35bp_to_AF130082_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 9.72e-11 | 3 |
omentum preadipocyte | 5.33e-10 | 3 |
fat cell | 2.83e-09 | 15 |
hepatic stem cell | 1.96e-07 | 2 |
hepatic mesenchymal stem cell | 1.96e-07 | 2 |
adipocyte of breast | 3.84e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.24e-12 | 6 |
peritoneum | 1.24e-12 | 6 |
abdominal cavity | 1.24e-12 | 6 |
visceral peritoneum | 1.24e-12 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.