FFCP PHASE1:Mm9::chr10:62801771..62801790,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=93759|HGNC=|MCL_coexpression_id=2571|UniProt=Q923E4,Q3UNI1,A7MCT8,Q3USJ2,Q53Z05|association_with_transcript=0bp_to_ENSMUST00000020257,ENSMUST00000105442,NM_001159589,NM_019812,uc007fke.2,uc007fkf.2_5end|description=CAGE_peak_1_at_Sirt1_5end|id=chr10:62801771..62801790,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005911!6.81e-08!69;UBERON:0004177!3.58e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0000153,3.96e-08,43;UBERON:0005911,6.81e-08,69;UBERON:0001048,8.05e-08,134;UBERON:0004177,3.58e-07,29;UBERON:0005057,3.58e-07,29;UBERON:0007811,3.91e-07,36|phase1_expression=19.2178616525753,78.1704913112169,59.1499011206397,107.979723436538,140.250804384977,40.1231459869417,34.8082834487333,19.497621839678,105.450752891598,98.3071010552373,10.7867319982068,8.21653237651965,21.9136934311943,22.9915658361963,19.3203661853084,27.7391116324062,32.1798463938947,25.3947043113381,21.3898516424952,26.3121584114779,14.7975324862861,10.6241317784947,11.7539905112521,10.239515058778,15.5998311125676,40.7704694521664,26.7072437618626,27.7957890164797,14.251756459228,22.9347418081537,10.8647950221099,18.4158895303293,8.61090702618398,15.8481681015439,17.908800424579,10.140313366868,26.3378469578456,23.4377713212668,20.3147189576188,25.6526634547161,21.1763335691165,20.4913645487534,20.8769451803396,15.6112054289716,15.3079166141467,16.3356609423897,3.9119567217402,2.18025156380447,2.19686182734472,2.52758868796568,2.79972843250725,2.87505128729943,66.4419119988636,64.5572306390096,64.5300094353531,7.20326420900652,10.0286703978565,9.28209766099396,5.86717736492834,8.46385566835253,3.1691570175309,3.38844532069132,3.55717918444456,1.3498495759221,1.97773272513395,3.5524005747305,2.99600110518405,3.84218305321555,10.0578923939223,8.23536223823313,7.78202357000113,4.28476476605705,5.52171352379034,9.30930074033651,9.39285615978716,3.67687514644008,6.60695285996332,4.59674417106676,7.68032666281217,7.51751840062105,9.69769022185542,5.73004707612436,5.58365998002762,7.31591393041184,8.25110537994775,10.9012576625257,7.83044244395066,8.76077395378913,15.1452386666368,20.4798927889389,57.3931687629322,12.9063581547208,15.6393406752783,10.2543606411185,5.84798775702902,16.1289679355041,11.6568868709354,11.930122580464,8.05336614268893,10.9535268098205,17.182897212755,16.6824420638613,20.3844191765317,78.2173373468664,8.65964164044856,8.86759529162845,10.6160133453104,14.8439043634778,19.9382170408322,13.8051189330287,8.15381035800839,9.13396434936424,7.61031140944993,7.83757730873637,12.5819916635204,13.948991637594,15.8204779349999,17.6411215442292,38.9228642857945,11.8089800461609,16.7839554029899,13.5765070877862,24.2309289583559,19.3235326027621,15.7085030110091,15.8383374229327,20.0091257924887,20.9965955847693,22.7455706460786,7.18995069143149,5.94750783664214,9.1727677042391,5.38855392596057,5.11430914660661,8.10373373782284,6.97637431191358,13.850153483643,13.43595282589,9.85618757891331,18.7293251738962,16.6554166992261,17.2426578325105,16.0255295526761,14.4676625122286,16.7369787912267,16.9110110776002,19.3025552593041,16.815719098036,20.6945273215529,27.0421694639982,18.2989169130507,14.2477226077924,14.7365042089567,16.3678518265418,14.1989674121481,16.5198441459349,15.4486901208912,24.1907032687832,24.1538974486254,11.8061690345236,13.8370375388847,9.36322719597277,12.3107262504309,11.8058539048442,9.56456099901745,8.60375595576509,11.267482858784,14.0118410840603,11.6837493438571,9.19337798842933,16.0516242900794,13.4503988431306,13.3925570327541,13.8232611323183,5.67782861123144,10.5991750750663,17.8426142811251,14.5447811664949,14.9301775374664,15.0953836709285,12.371276286921,10.6892268050372,11.5636582799333,12.5548913234289,10.9141684155238,7.90554982675252,10.304743560811,12.3353012665514,14.0374142725766,14.3811105384675,14.2651112917298,14.9355954940775,17.0701110857774,15.1950521770939,14.6520056375005,11.4044743593376,10.861339281387,12.4841759404767,14.6076400757034,16.9751670176542,11.9319033159445,13.4502908674763,12.4510103376603,24.5262305402658,21.4249304673391,22.7110733508702,24.5460746880089,19.2941727801933,12.9859184408524,11.7955416354832,11.5116011010275,8.23684239564244,11.5014565221884,7.81495990103857,7.17686648163489,10.6083128737787,7.53469136792031,13.5084185981743,19.5838381576601,17.2437184711141,16.4594626206446,15.1073126339917,13.8467246490216,19.095713348367,18.8054476299951,22.0501022079313,16.5516901311501,13.0664166892777,16.9022054776936,19.3358711364571,13.6421135674058,15.1881511510587,4.52373851817817,4.89515115436839,10.3270497333998,11.5893433447988,7.06422595946285,7.3843362553088,4.09837363441689,14.6433137778536,13.566853434899,16.0079885161622,10.9865932843727,13.3822526853429,15.3731085116852,12.7384438854975,12.9539424535966,12.5670018901864,16.9973744517005,8.35435422696698,17.6005705658253,7.65682095769198,19.220661203722,17.4868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| ||
|EntrezGene=93759 | |||
|HGNC= | |||
|MCL_coexpression_id=2571 | |||
|UniProt=Q923E4,Q3UNI1,A7MCT8,Q3USJ2,Q53Z05 | |||
|association_with_transcript=0bp_to_ENSMUST00000020257,ENSMUST00000105442,NM_001159589,NM_019812,uc007fke.2,uc007fkf.2_5end | |||
|description=CAGE_peak_1_at_Sirt1_5end | |||
|id=chr10:62801771..62801790,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!6.81e-08!69;UBERON:0004177!3.58e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,3.96e-08,43;UBERON:0005911,6.81e-08,69;UBERON:0001048,8.05e-08,134;UBERON:0004177,3.58e-07,29;UBERON:0005057,3.58e-07,29;UBERON:0007811,3.91e-07,36 | |||
|phase1_expression=19.2178616525753,78.1704913112169,59.1499011206397,107.979723436538,140.250804384977,40.1231459869417,34.8082834487333,19.497621839678,105.450752891598,98.3071010552373,10.7867319982068,8.21653237651965,21.9136934311943,22.9915658361963,19.3203661853084,27.7391116324062,32.1798463938947,25.3947043113381,21.3898516424952,26.3121584114779,14.7975324862861,10.6241317784947,11.7539905112521,10.239515058778,15.5998311125676,40.7704694521664,26.7072437618626,27.7957890164797,14.251756459228,22.9347418081537,10.8647950221099,18.4158895303293,8.61090702618398,15.8481681015439,17.908800424579,10.140313366868,26.3378469578456,23.4377713212668,20.3147189576188,25.6526634547161,21.1763335691165,20.4913645487534,20.8769451803396,15.6112054289716,15.3079166141467,16.3356609423897,3.9119567217402,2.18025156380447,2.19686182734472,2.52758868796568,2.79972843250725,2.87505128729943,66.4419119988636,64.5572306390096,64.5300094353531,7.20326420900652,10.0286703978565,9.28209766099396,5.86717736492834,8.46385566835253,3.1691570175309,3.38844532069132,3.55717918444456,1.3498495759221,1.97773272513395,3.5524005747305,2.99600110518405,3.84218305321555,10.0578923939223,8.23536223823313,7.78202357000113,4.28476476605705,5.52171352379034,9.30930074033651,9.39285615978716,3.67687514644008,6.60695285996332,4.59674417106676,7.68032666281217,7.51751840062105,9.69769022185542,5.73004707612436,5.58365998002762,7.31591393041184,8.25110537994775,10.9012576625257,7.83044244395066,8.76077395378913,15.1452386666368,20.4798927889389,57.3931687629322,12.9063581547208,15.6393406752783,10.2543606411185,5.84798775702902,16.1289679355041,11.6568868709354,11.930122580464,8.05336614268893,10.9535268098205,17.182897212755,16.6824420638613,20.3844191765317,78.2173373468664,8.65964164044856,8.86759529162845,10.6160133453104,14.8439043634778,19.9382170408322,13.8051189330287,8.15381035800839,9.13396434936424,7.61031140944993,7.83757730873637,12.5819916635204,13.948991637594,15.8204779349999,17.6411215442292,38.9228642857945,11.8089800461609,16.7839554029899,13.5765070877862,24.2309289583559,19.3235326027621,15.7085030110091,15.8383374229327,20.0091257924887,20.9965955847693,22.7455706460786,7.18995069143149,5.94750783664214,9.1727677042391,5.38855392596057,5.11430914660661,8.10373373782284,6.97637431191358,13.850153483643,13.43595282589,9.85618757891331,18.7293251738962,16.6554166992261,17.2426578325105,16.0255295526761,14.4676625122286,16.7369787912267,16.9110110776002,19.3025552593041,16.815719098036,20.6945273215529,27.0421694639982,18.2989169130507,14.2477226077924,14.7365042089567,16.3678518265418,14.1989674121481,16.5198441459349,15.4486901208912,24.1907032687832,24.1538974486254,11.8061690345236,13.8370375388847,9.36322719597277,12.3107262504309,11.8058539048442,9.56456099901745,8.60375595576509,11.267482858784,14.0118410840603,11.6837493438571,9.19337798842933,16.0516242900794,13.4503988431306,13.3925570327541,13.8232611323183,5.67782861123144,10.5991750750663,17.8426142811251,14.5447811664949,14.9301775374664,15.0953836709285,12.371276286921,10.6892268050372,11.5636582799333,12.5548913234289,10.9141684155238,7.90554982675252,10.304743560811,12.3353012665514,14.0374142725766,14.3811105384675,14.2651112917298,14.9355954940775,17.0701110857774,15.1950521770939,14.6520056375005,11.4044743593376,10.861339281387,12.4841759404767,14.6076400757034,16.9751670176542,11.9319033159445,13.4502908674763,12.4510103376603,24.5262305402658,21.4249304673391,22.7110733508702,24.5460746880089,19.2941727801933,12.9859184408524,11.7955416354832,11.5116011010275,8.23684239564244,11.5014565221884,7.81495990103857,7.17686648163489,10.6083128737787,7.53469136792031,13.5084185981743,19.5838381576601,17.2437184711141,16.4594626206446,15.1073126339917,13.8467246490216,19.095713348367,18.8054476299951,22.0501022079313,16.5516901311501,13.0664166892777,16.9022054776936,19.3358711364571,13.6421135674058,15.1881511510587,4.52373851817817,4.89515115436839,10.3270497333998,11.5893433447988,7.06422595946285,7.3843362553088,4.09837363441689,14.6433137778536,13.566853434899,16.0079885161622,10.9865932843727,13.3822526853429,15.3731085116852,12.7384438854975,12.9539424535966,12.5670018901864,16.9973744517005,8.35435422696698,17.6005705658253,7.65682095769198,19.220661203722,17.4868330350888,13.2745138339963,11.8962511715941,6.95344181018927,7.54420319023592,7.08724542913855,10.4527950300935,13.9551278310839,10.5424781548477,9.62542921638748,8.21695570633122,5.27093042874994,15.470331487228,8.17055053809091,14.9450708045987,6.07985813778946,12.2172109968008,15.4286003268778,10.3453914209201,11.8475294833527,9.13394847343798,10.560226862867,15.2519091021951,12.3495902910779,19.9512366059191,14.8547272560233,18.1541904033749,16.3540111284297,22.9797259643086,12.5336759750836,8.71498919449395,21.0171183381359,14.6534676253888,15.5563402990558,17.8950034154456,25.8352090392738,19.4461447225544,19.8874763092811,20.2929605869304,19.0715963850105,11.4560474161814,20.2455035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| |||
|short_description=p1@Sirt1 | |||
}} | |||
Revision as of 17:08, 12 September 2013
| Short description: | p1@Sirt1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Sirt1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2571 |
| Association with transcript: | 0bp_to_ENSMUST00000020257, ENSMUST00000105442, NM_001159589, NM_019812, uc007fke.2, uc007fkf.2_5end |
| EntrezGene: | Sirt1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| anterior region of body | 3.96e-08 | 43 |
| endo-epithelium | 6.81e-08 | 69 |
| primordium | 8.05e-08 | 134 |
| hemopoietic organ | 3.58e-07 | 29 |
| immune organ | 3.58e-07 | 29 |
| craniocervical region | 3.91e-07 | 36 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
