FFCP PHASE1:Hg19::chr2:36764553..36764573,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C2699|description=CAGE_peak_at_chr2:36764553..36764573,+|id=chr2:36764553..36764573,+|ontology_enrichment_celltype=CL:0000222!5.36e-15!119;CL:0000057!3.40e-12!75;CL:0000220!4.13e-12!246;CL:0002321!6.39e-12!248;CL:0000055!1.22e-11!180;CL:0000213!5.79e-11!57;CL:0000215!5.79e-11!57;CL:0002620!3.23e-08!23;CL:0000077!1.51e-07!19|ontology_enrichment_celltype_v019=CL:0000077;5.95e-10;19!CL:0000213;2.35e-08;58!CL:0000215;2.35e-08;58!CL:0002620;3.90e-08;23!CL:0002595;9.55e-07;5|ontology_enrichment_celltype_v019_2=CL:0000057,7.04e-14,76;CL:0000213,1.76e-13,58;CL:0000215,1.76e-13,58;CL:0000222,6.49e-13,121;CL:0000077,1.32e-09,19;CL:0002620,2.94e-08,23;CL:0000115,3.99e-07,36|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!6.18e-12!69;UBERON:0002049!1.38e-11!79;UBERON:0007798!1.38e-11!79;UBERON:0003914!5.52e-11!118;UBERON:0004872!6.72e-11!84;UBERON:0000477!1.34e-10!286;UBERON:0001981!3.16e-10!60;UBERON:0007500!3.16e-10!60;UBERON:0004537!3.16e-10!60;UBERON:0006965!3.16e-10!60;UBERON:0000468!4.60e-10!659;UBERON:0000481!4.77e-09!347;UBERON:0004111!6.49e-09!241;UBERON:0000467!7.26e-09!625;UBERON:0000475!7.49e-09!365;UBERON:0000480!1.02e-08!626;UBERON:0005256!1.56e-08!143;UBERON:0001637!1.93e-08!42;UBERON:0003509!1.93e-08!42;UBERON:0004572!1.93e-08!42;UBERON:0000119!2.36e-08!312;UBERON:0003104!3.12e-08!238;UBERON:0009142!3.12e-08!238;UBERON:0000483!3.14e-08!309;UBERON:0004535!3.68e-08!110;UBERON:0001009!4.12e-08!113;UBERON:0000490!6.35e-08!138;UBERON:0003102!1.77e-07!95;UBERON:0002100!2.93e-07!216;UBERON:0004573!3.37e-07!33;UBERON:0004571!3.37e-07!33|ontology_enrichment_uberon_v019=UBERON:0001637;4.28e-08;42!UBERON:0003509;4.28e-08;42!UBERON:0004572;4.28e-08;42!UBERON:0003513;3.44e-07;7!UBERON:0004573;4.93e-07;33!UBERON:0004571;4.93e-07;33!UBERON:0003834;9.55e-07;5!UBERON:0001533;9.55e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.06e-11,68;UBERON:0002049,9.73e-11,78;UBERON:0007798,9.73e-11,78;UBERON:0001637,2.18e-09,42;UBERON:0003509,2.18e-09,42;UBERON:0004572,2.18e-09,42;UBERON:0007500,4.03e-09,59;UBERON:0001981,4.03e-09,59;UBERON:0004537,4.03e-09,59;UBERON:0006965,4.03e-09,59;UBERON:0002097,2.26e-08,41;UBERON:0002199,3.97e-08,46;UBERON:0002416,3.97e-08,46;UBERON:0004872,8.02e-08,83;UBERON:0004535,1.26e-07,109;UBERON:0004573,3.00e-07,33;UBERON:0004571,3.00e-07,33;UBERON:0001009,3.12e-07,112;UBERON:0003513,3.93e-07,7|phase1_expression=0.726713517082227,2.99740733447376,0.704772020479856,0,0.446961094427288,3.48935409640147,0,0,0,0.245733936501509,0.697801167972428,0,0.263766978228454,0.37129905888014,0,0.672325146451775,1.80808358407193,2.19093027116212,2.43966399395253,0.246242116153576,0.204000691244253,0,0,0.273748850145768,0.502170558379211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,0.361439152384566,1.00267582127178,1.73815822752988,0,0,0.283604451492204,1.33037638477538,0.351339142772504,0.130979075497713,0,0.370784442784429,0,0,0.132957960518865,0,0,0,0,0,0.694281003215189,0.56530794192401,1.67799774483962,3.30141650328081,1.25396979922086,1.03366703667732,0.35576626268671,2.67776490211736,0.805658634218294,0,2.4406205754817,1.10298924103761,5.67099363517232,0.982297011124877,0.44905874525234,0.337834441449967,0,0,0.732806975721629,0,0,0.436094052142534,0.496971951695318,0.759783069987479,0.132409180813219,3.72887606973458,1.06400514659507,1.12135520028461,1.06748995729705,1.2333377420858,0.311211035399766,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0.352303495931295,0,0.140450806702248,0.408308342509787,0.245668634623536,0.206651562351531,0,0.989067717114227,0.910161361938026,0,0,0,0.277064115484183,0.438977620880838,2.45190236639216,0.45071417671979,1.81491493056034,3.40840307808838,1.2813443329114,1.27159140695737,2.40072876867522,0.721367704669072,2.83404594050192,1.30281799432113,0.337552664482532,1.55899208257918,2.01947019395292,0.920498986422993,0.80823028409406,7.4552014428489,1.71278566986988,2.03472710772585,0,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,3.21620469096443,0,0.928735856063958,2.16563844500876,1.0647612003586,0.842923450390509,0.964044119533928,0.992645754591546,0.435758888184812,0.474541238222193,0,0.784885860501384,0.38474715694639,2.95262181849859,0,0,0,0,0,0,0,0.614942192715568,0.514703430895577,0.98775256867763,0,0.603173834469785,0.648119116109707,0.651616610620649,0,0,0.463721619900307,0,1.44366447761074,0.462985512576611,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C2699 | |||
|description=CAGE_peak_at_chr2:36764553..36764573,+ | |||
|id=chr2:36764553..36764573,+ | |||
|ontology_enrichment_celltype=CL:0000222!5.36e-15!119;CL:0000057!3.40e-12!75;CL:0000220!4.13e-12!246;CL:0002321!6.39e-12!248;CL:0000055!1.22e-11!180;CL:0000213!5.79e-11!57;CL:0000215!5.79e-11!57;CL:0002620!3.23e-08!23;CL:0000077!1.51e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000077;5.95e-10;19!CL:0000213;2.35e-08;58!CL:0000215;2.35e-08;58!CL:0002620;3.90e-08;23!CL:0002595;9.55e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.04e-14,76;CL:0000213,1.76e-13,58;CL:0000215,1.76e-13,58;CL:0000222,6.49e-13,121;CL:0000077,1.32e-09,19;CL:0002620,2.94e-08,23;CL:0000115,3.99e-07,36 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.18e-12!69;UBERON:0002049!1.38e-11!79;UBERON:0007798!1.38e-11!79;UBERON:0003914!5.52e-11!118;UBERON:0004872!6.72e-11!84;UBERON:0000477!1.34e-10!286;UBERON:0001981!3.16e-10!60;UBERON:0007500!3.16e-10!60;UBERON:0004537!3.16e-10!60;UBERON:0006965!3.16e-10!60;UBERON:0000468!4.60e-10!659;UBERON:0000481!4.77e-09!347;UBERON:0004111!6.49e-09!241;UBERON:0000467!7.26e-09!625;UBERON:0000475!7.49e-09!365;UBERON:0000480!1.02e-08!626;UBERON:0005256!1.56e-08!143;UBERON:0001637!1.93e-08!42;UBERON:0003509!1.93e-08!42;UBERON:0004572!1.93e-08!42;UBERON:0000119!2.36e-08!312;UBERON:0003104!3.12e-08!238;UBERON:0009142!3.12e-08!238;UBERON:0000483!3.14e-08!309;UBERON:0004535!3.68e-08!110;UBERON:0001009!4.12e-08!113;UBERON:0000490!6.35e-08!138;UBERON:0003102!1.77e-07!95;UBERON:0002100!2.93e-07!216;UBERON:0004573!3.37e-07!33;UBERON:0004571!3.37e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.28e-08;42!UBERON:0003509;4.28e-08;42!UBERON:0004572;4.28e-08;42!UBERON:0003513;3.44e-07;7!UBERON:0004573;4.93e-07;33!UBERON:0004571;4.93e-07;33!UBERON:0003834;9.55e-07;5!UBERON:0001533;9.55e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,4.06e-11,68;UBERON:0002049,9.73e-11,78;UBERON:0007798,9.73e-11,78;UBERON:0001637,2.18e-09,42;UBERON:0003509,2.18e-09,42;UBERON:0004572,2.18e-09,42;UBERON:0007500,4.03e-09,59;UBERON:0001981,4.03e-09,59;UBERON:0004537,4.03e-09,59;UBERON:0006965,4.03e-09,59;UBERON:0002097,2.26e-08,41;UBERON:0002199,3.97e-08,46;UBERON:0002416,3.97e-08,46;UBERON:0004872,8.02e-08,83;UBERON:0004535,1.26e-07,109;UBERON:0004573,3.00e-07,33;UBERON:0004571,3.00e-07,33;UBERON:0001009,3.12e-07,112;UBERON:0003513,3.93e-07,7 | |||
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| |||
|short_description=p@chr2:36764553..36764573,+ | |||
}} |
Revision as of 18:24, 12 September 2013
Short description: | p@chr2:36764553..36764573, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:36764553..36764573, + |
Coexpression cluster: | C2699_Olfactory_Fibroblast_Endothelial_chorionic_Adipocyte_Chondrocyte_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.04e-14 | 76 |
lining cell | 1.76e-13 | 58 |
barrier cell | 1.76e-13 | 58 |
mesodermal cell | 6.49e-13 | 121 |
mesothelial cell | 1.32e-09 | 19 |
skin fibroblast | 2.94e-08 | 23 |
endothelial cell | 3.99e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
vessel | 4.06e-11 | 68 |
vasculature | 9.73e-11 | 78 |
vascular system | 9.73e-11 | 78 |
artery | 2.18e-09 | 42 |
arterial blood vessel | 2.18e-09 | 42 |
arterial system | 2.18e-09 | 42 |
epithelial tube open at both ends | 4.03e-09 | 59 |
blood vessel | 4.03e-09 | 59 |
blood vasculature | 4.03e-09 | 59 |
vascular cord | 4.03e-09 | 59 |
skin of body | 2.26e-08 | 41 |
integument | 3.97e-08 | 46 |
integumental system | 3.97e-08 | 46 |
splanchnic layer of lateral plate mesoderm | 8.02e-08 | 83 |
cardiovascular system | 1.26e-07 | 109 |
systemic artery | 3.00e-07 | 33 |
systemic arterial system | 3.00e-07 | 33 |
circulatory system | 3.12e-07 | 112 |
trunk blood vessel | 3.93e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.