Personal tools

FFCP PHASE1:Mm9::chr11:68200343..68200362,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=18208|HGNC=|MCL_coexpression_id=911|UniProt=O09118|association_with_transcript=-15bp_to_ENSMUST00000021284,NM_008744,uc007jnm.1_5end|description=CAGE_peak_2_at_Ntn1_5end|id=chr11:68200343..68200362,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!2.12e-08!43;UBERON:0001045!4.54e-08!13;UBERON:0000468!1.17e-07!333;UBERON:0001264!1.49e-07!12;UBERON:0003922!1.49e-07!12;UBERON:0002114!1.49e-07!12;UBERON:0003923!1.49e-07!12;UBERON:0003924!1.49e-07!12;UBERON:0003921!1.49e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.91e-10,43;UBERON:0001264,6.00e-08,12;UBERON:0007100,1.38e-07,18;UBERON:0000948,1.38e-07,18;UBERON:0005498,1.38e-07,18;UBERON:0004140,1.38e-07,18;UBERON:0009881,1.38e-07,18;UBERON:0004141,1.38e-07,18;UBERON:0003084,1.38e-07,18;UBERON:0007005,1.38e-07,18;UBERON:0004139,1.38e-07,18;UBERON:0004291,1.38e-07,18|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0,0,4.14247797122848,0.219686182734472,0.388859798148567,3.07970127575798,18.6878333674463,0,0,0,0,0,0,4.24864567805155,8.99284664762456,2.53532561402472,0.677689064138264,0,0.449949858640699,0,0.7104801149461,4.49400165777607,6.53171119046643,0,0,0,4.85606673486466,3.3130281142742,0.979926393719632,1.15014565221884,2.75765635983006,2.20231761998777,0.766124028511126,1.22885226604995,2.76961204233407,3.65950574409639,2.6045668527838,1.3959149950069,1.12552522006336,0.763991238884051,5.59794312399969,3.84403538157578,5.59198337475902,0.530083353332288,0.226714680320357,2.02905142091174,2.58127163094416,0,0,0.649776417447669,0,0.561777680527007,1.36344258062446,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.37020655662872,0,1.48442139064825,1.21439728736295,1.52232739156071,1.38369298353635,1.95939432718409,1.41106448562846,1.38233250462643,0,1.73519228303894,0,2.10296904931632,1.32504911076236,0.969750506270444,3.72783522436244,2.92780797011547,1.8850203613211,2.29911349687732,0,0,0,0.748953197024114,1.83000241127451,0.879580464790051,0.695297280769106,0.511430914660661,1.24672826735736,0.973447578406546,3.66621709861139,1.11966273549084,3.79084137650512,2.73574412652416,0.520481771850815,1.14951052216736,1.80062129805349,0.60281927134286,1.42876648217788,0.768682321709099,1.59292931751539,0.517406741478031,0.646703978798527,1.51284864134255,0.879755620819744,0.43839146485515,0.278047249225598,1.0447564995665,2.26360350048738,0.199034266818493,0,0,0,3.52113813310353,3.28336483973535,3.6012412292203,4.26140524053378,3.54175617145327,3.85667782218446,4.88321283975857,3.48755421819505,8.05680862333469,10.2027106946358,2.62667942526552,4.29664690593035,3.65499968563331,2.19550115291051,4.2946054003319,0,0.205809224758569,0.991256348951394,0.528901133327089,0.639864751605702,1.39342003116263,2.31961430379768,2.21851877085677,2.66853652613844,1.14135375667535,3.32170343081158,1.97638745668813,3.51869292320377,2.38747766449381,0.974820435595601,1.79763881730844,1.94524244887225,1.39398891278057,1.89667900953082,2.05647322697512,0,2.8511185898344,2.13347735884388,1.75339549725796,1.7706230394792,1.03327103585722,1.255989822731,1.35736880313981,0.889357881261447,0.166845105716094,0,0,0,0,0,0.575392274901621,0.486405680325106,0,0,1.48856379067401,1.87222603868736,1.76805214562978,0.896987067609561,0.964887042726734,2.40179147216586,0.189491411770485,1.14075483509418,0.169745085775188,0,0.167506257441816,0.238043640886014,1.17080188714679,1.7339865851681,3.32197034473162,3.82691444777969,3.11340297959902,2.24490476425664,2.4590339958857,0,0,0.983528546038072,0.551873492609465,0.160550589987792,0.35163505977661,0.327869890753351,1.00988370881749,0.315508219416257,0.390438744296638,0.215423397732799,1.43381278771531,1.78238939265915,2.54768877709949,0,0.292255857911312,0.395287777946524,0.963963949265421,0.709700426041343,2.67098405500883,3.25773918707152,3.29940245945071,22.5666735177937,0.971122544619926,2.72091201268276,3.39489143560617,3.2483208216885,5.22639751504677,4.13485269069154,6.90714086007261,8.55593708123331,11.0612865277536,13.7044191147498,14.4389760547462,1.02131881726136,1.44048875225048,0.388076051348264,0.428674070063185,0.354680467284547,0.713475270408282,0.493647061806363,1.522324745573,0,1.27099242518292,0,0.65954501176592,5.32832608096488,3.5584625707612,3.34242563208782,0.656563598980245,3.78925087618806,1.11255181206306,0.170870880797853,0.619160603889667,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,1.10717597753397,2.43983360552218,2.16010681643603,1.04544148007234,1.9652630737156,2.15782954215713,2.56225712748541,1.30877970992015,2.20345454596048,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.781226309063701,0.104859344425711,0.241584120826006,0.288030006257865,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,1.81384306892169,0,0,0,2.12508553435409,6.19352168988901,3.84618410961257,1.07184189539533,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.93408612825759,1.19707462020309,2.39027048055788,1.94485373654635,0.838452650511929,0.919217542250071,1.77797382241292,0.412070114477788,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,1.49826411951812,2.11283002936069,1.55075766180156,2.38146845641537,1.39061191133827,1.15745532278223,0.824171801606613,0.883193520806384,0.342869252385415,1.4198064492747,0.715308569841963,1.16277133305863,1.03520318456864,1.52306294205018,0.914639864363863,0.789209134313529,1.35804113845862,1.12228454331548,1.77952527186261,1.97008964751127,0.409231043169689,0.619747364743864,2.3148793317737,2.74791635731741,1.40358965067245,2.36358159453128,2.29545998482612,1.98532277207564,2.08681052058379|short_description=p2@Ntn1}}
|EntrezGene=18208
|HGNC=
|MCL_coexpression_id=911
|UniProt=O09118
|association_with_transcript=-15bp_to_ENSMUST00000021284,NM_008744,uc007jnm.1_5end
|description=CAGE_peak_2_at_Ntn1_5end
|id=chr11:68200343..68200362,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003103!2.12e-08!43;UBERON:0001045!4.54e-08!13;UBERON:0000468!1.17e-07!333;UBERON:0001264!1.49e-07!12;UBERON:0003922!1.49e-07!12;UBERON:0002114!1.49e-07!12;UBERON:0003923!1.49e-07!12;UBERON:0003924!1.49e-07!12;UBERON:0003921!1.49e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.91e-10,43;UBERON:0001264,6.00e-08,12;UBERON:0007100,1.38e-07,18;UBERON:0000948,1.38e-07,18;UBERON:0005498,1.38e-07,18;UBERON:0004140,1.38e-07,18;UBERON:0009881,1.38e-07,18;UBERON:0004141,1.38e-07,18;UBERON:0003084,1.38e-07,18;UBERON:0007005,1.38e-07,18;UBERON:0004139,1.38e-07,18;UBERON:0004291,1.38e-07,18
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0,0,4.14247797122848,0.219686182734472,0.388859798148567,3.07970127575798,18.6878333674463,0,0,0,0,0,0,4.24864567805155,8.99284664762456,2.53532561402472,0.677689064138264,0,0.449949858640699,0,0.7104801149461,4.49400165777607,6.53171119046643,0,0,0,4.85606673486466,3.3130281142742,0.979926393719632,1.15014565221884,2.75765635983006,2.20231761998777,0.766124028511126,1.22885226604995,2.76961204233407,3.65950574409639,2.6045668527838,1.3959149950069,1.12552522006336,0.763991238884051,5.59794312399969,3.84403538157578,5.59198337475902,0.530083353332288,0.226714680320357,2.02905142091174,2.58127163094416,0,0,0.649776417447669,0,0.561777680527007,1.36344258062446,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.37020655662872,0,1.48442139064825,1.21439728736295,1.52232739156071,1.38369298353635,1.95939432718409,1.41106448562846,1.38233250462643,0,1.73519228303894,0,2.10296904931632,1.32504911076236,0.969750506270444,3.72783522436244,2.92780797011547,1.8850203613211,2.29911349687732,0,0,0,0.748953197024114,1.83000241127451,0.879580464790051,0.695297280769106,0.511430914660661,1.24672826735736,0.973447578406546,3.66621709861139,1.11966273549084,3.79084137650512,2.73574412652416,0.520481771850815,1.14951052216736,1.80062129805349,0.60281927134286,1.42876648217788,0.768682321709099,1.59292931751539,0.517406741478031,0.646703978798527,1.51284864134255,0.879755620819744,0.43839146485515,0.278047249225598,1.0447564995665,2.26360350048738,0.199034266818493,0,0,0,3.52113813310353,3.28336483973535,3.6012412292203,4.26140524053378,3.54175617145327,3.85667782218446,4.88321283975857,3.48755421819505,8.05680862333469,10.2027106946358,2.62667942526552,4.29664690593035,3.65499968563331,2.19550115291051,4.2946054003319,0,0.205809224758569,0.991256348951394,0.528901133327089,0.639864751605702,1.39342003116263,2.31961430379768,2.21851877085677,2.66853652613844,1.14135375667535,3.32170343081158,1.97638745668813,3.51869292320377,2.38747766449381,0.974820435595601,1.79763881730844,1.94524244887225,1.39398891278057,1.89667900953082,2.05647322697512,0,2.8511185898344,2.13347735884388,1.75339549725796,1.7706230394792,1.03327103585722,1.255989822731,1.35736880313981,0.889357881261447,0.166845105716094,0,0,0,0,0,0.575392274901621,0.486405680325106,0,0,1.48856379067401,1.87222603868736,1.76805214562978,0.896987067609561,0.964887042726734,2.40179147216586,0.189491411770485,1.14075483509418,0.169745085775188,0,0.167506257441816,0.238043640886014,1.17080188714679,1.7339865851681,3.32197034473162,3.82691444777969,3.11340297959902,2.24490476425664,2.4590339958857,0,0,0.983528546038072,0.551873492609465,0.160550589987792,0.35163505977661,0.327869890753351,1.00988370881749,0.315508219416257,0.390438744296638,0.215423397732799,1.43381278771531,1.78238939265915,2.54768877709949,0,0.292255857911312,0.395287777946524,0.963963949265421,0.709700426041343,2.67098405500883,3.25773918707152,3.29940245945071,22.5666735177937,0.971122544619926,2.72091201268276,3.39489143560617,3.2483208216885,5.22639751504677,4.13485269069154,6.90714086007261,8.55593708123331,11.0612865277536,13.7044191147498,14.4389760547462,1.02131881726136,1.44048875225048,0.388076051348264,0.428674070063185,0.354680467284547,0.713475270408282,0.493647061806363,1.522324745573,0,1.27099242518292,0,0.65954501176592,5.32832608096488,3.5584625707612,3.34242563208782,0.656563598980245,3.78925087618806,1.11255181206306,0.170870880797853,0.619160603889667,0.185194527369712,0,0.136694227721025,0.228778173206523,0,0,0,0,1.10717597753397,2.43983360552218,2.16010681643603,1.04544148007234,1.9652630737156,2.15782954215713,2.56225712748541,1.30877970992015,2.20345454596048,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.337912250981556,0.352071715937262,0.781226309063701,0.104859344425711,0.241584120826006,0.288030006257865,0,0.608175645870493,0.308132871494482,0,0,0,0,0,0,0,0,0,0,0,1.81384306892169,0,0,0,2.12508553435409,6.19352168988901,3.84618410961257,1.07184189539533,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0.685082519770642,0.755393897389701,0,0,0,0,0.93408612825759,1.19707462020309,2.39027048055788,1.94485373654635,0.838452650511929,0.919217542250071,1.77797382241292,0.412070114477788,0.64183841918363,1.01078884705519,0.760437899670719,0.754505365544305,1.49826411951812,2.11283002936069,1.55075766180156,2.38146845641537,1.39061191133827,1.15745532278223,0.824171801606613,0.883193520806384,0.342869252385415,1.4198064492747,0.715308569841963,1.16277133305863,1.03520318456864,1.52306294205018,0.914639864363863,0.789209134313529,1.35804113845862,1.12228454331548,1.77952527186261,1.97008964751127,0.409231043169689,0.619747364743864,2.3148793317737,2.74791635731741,1.40358965067245,2.36358159453128,2.29545998482612,1.98532277207564,2.08681052058379
|short_description=p2@Ntn1
}}

Revision as of 20:30, 12 September 2013

Short description:p2@Ntn1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Ntn1_5end
Coexpression cluster:MCL_coexpression_mm9:911
Association with transcript: -15bp_to_ENSMUST00000021284, NM_008744, uc007jnm.1_5end
EntrezGene:Ntn1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Ntn1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.51
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C24.14
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C43.08
Mouse Astrocytes, donor3.CNhs12107.11633-122C418.69
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C84.49
Mouse Microglia, donor2.CNhs12634.11736-123E86.53
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F14.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.31
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.77
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.66
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E51.13
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D65.60
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F63.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.59
Mouse Schwann, donor1.CNhs12507.11728-123D90.53
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.03
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F72.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C51.21
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F51.96
adrenal gland, neonate N00.CNhs11191.1311-23C11.41
adrenal gland, neonate N25.CNhs11223.1377-27I31.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H11.74
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.10
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.93
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H72.30
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.97
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.67
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B23.79
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.52
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.59
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B52.26
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F53.28
heart, embryo E13.CNhs11013.376-3I93.60
heart, embryo E14.CNhs10597.403-26D44.26
heart, embryo E15.CNhs11017.431-16C83.54
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E54.88
heart, embryo E18.CNhs11030.1283-20G33.49
heart, neonate N00.CNhs11213.639-21E38.06
heart, neonate N03.CNhs11221.1349-25I210.20
heart, neonate N10.CNhs11118.749-24G12.63
heart, neonate N16.CNhs11209.782-15G14.30
heart, neonate N20.CNhs11127.821-26I63.65
heart, neonate N25.CNhs11196.1351-25D32.20
heart, neonate N30.CNhs11202.1390-42D24.29
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.21
intestinal mucosa, adult.CNhs10506.860-29I30.99
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.39
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D13.32
intestine, neonate N01.CNhs11192.1322-23E91.98
intestine, neonate N06.CNhs11102.688-20B83.52
intestine, neonate N07.CNhs11095.720-20F22.39
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.95
intestine, neonate N30.CNhs11131.1384-42G11.39
kidney, embryo E14.CNhs10606.411-4I91.90
kidney, embryo E15.CNhs10997.434-16F82.06
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I22.85
kidney, embryo E18.CNhs11001.1288-20C72.13
kidney, neonate N00.CNhs11214.646-21G71.75
kidney, neonate N10.CNhs11206.758-6D51.77
kidney, neonate N20.CNhs11113.832-19I11.03
kidney, neonate N25.CNhs11122.1353-25F31.26
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H21.49
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A31.77
liver, neonate N25.CNhs11198.1368-26H10.90
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B12.40
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E51.73
lung, neonate N07.CNhs11111.715-19A33.32
lung, neonate N10.CNhs11219.750-23E63.83
lung, neonate N20.CNhs11109.822-18A43.11
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H22.46
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.43
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.55
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.71
ovary, embryo E18.CNhs11040.505-44H72.67
ovary, neonate N00.CNhs11217.1299-22I43.26
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E422.57
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F22.72
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G33.25
pancreas, embryo E18.CNhs10580.1535-43I75.23
pancreas, neonate N00.CNhs11105.645-26G94.13
pancreas, neonate N01.CNhs11138.1531-43D76.91
pancreas, neonate N02.CNhs11139.1539-43D88.56
pancreas, neonate N16.CNhs11136.787-43B611.06
pancreas, neonate N25.CNhs11094.1555-45E213.70
pancreas, neonate N30.CNhs11182.1548-44H514.44
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.44
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G31.27
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G45.33
skin, neonate N03.CNhs11215.662-22H33.56
skin, neonate N06.CNhs11097.693-20I53.34
skin, neonate N10.CNhs11108.762-6C40.66
small intestine, neonate N16.CNhs11114.790-21I13.79
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G82.44
stomach, embryo E16.CNhs11022.459-17D42.16
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C61.97
stomach, neonate N03.CNhs11193.1340-24B82.16
stomach, neonate N07.CNhs11210.718-18A92.56
stomach, neonate N25.CNhs11104.1355-25E41.31
stomach, neonate N30.CNhs11134.1386-42I12.20
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.78
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E42.13
uterus, adult pregnant day19.CNhs10497.590-15F56.19
uterus, adult.CNhs10509.92-27E53.85
vagina, adult.CNhs10502.89-27D51.07
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.93
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D21.94
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.92
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.50
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.97
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F92.31
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.99
whole body, neonate N10.CNhs10518.761-6B42.09





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
compound organ1.91e-1043
pancreas6.00e-0812
primary circulatory organ1.38e-0718
heart1.38e-0718
primitive heart tube1.38e-0718
primary heart field1.38e-0718
anterior lateral plate mesoderm1.38e-0718
heart tube1.38e-0718
heart primordium1.38e-0718
cardiac mesoderm1.38e-0718
cardiogenic plate1.38e-0718
heart rudiment1.38e-0718







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:68200343..68200362,-&oldid=2893249"