FFCP PHASE1:Hg19::chr3:115509871..115509888,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C4270|description=CAGE_peak_at_chr3:115509871..115509888,+|id=chr3:115509871..115509888,+|ontology_enrichment_celltype=CL:0000243!8.77e-08!15;CL:0000125!8.77e-08!15;CL:0000030!8.77e-08!15;CL:0000339!8.77e-08!15;CL:0000066!4.64e-07!254|ontology_enrichment_celltype_v019=CL:0000319;1.05e-08;1!CL:0000083;5.83e-08;4!CL:0000569;1.16e-07;4|ontology_enrichment_celltype_v019_2=CL:0000319,1.05e-08,1;CL:0000083,5.84e-08,4;CL:0000569,1.52e-07,4;CL:0000011,1.52e-07,4|ontology_enrichment_development_v019=CL:0000011;1.16e-07;4|ontology_enrichment_disease=DOID:305!3.50e-16!106;DOID:0050687!6.13e-11!143;DOID:1749!7.15e-09!14;DOID:7!1.10e-08!39;DOID:14566!1.03e-07!239;DOID:299!1.97e-07!25;DOID:162!3.76e-07!235|ontology_enrichment_disease_v019=DOID:4929;4.79e-15;2!DOID:299;9.64e-10;25!DOID:3111;9.79e-09;1!DOID:3603;9.79e-09;1!DOID:3030;1.05e-08;1!DOID:5662;1.13e-08;1!DOID:1793;5.83e-08;4|ontology_enrichment_disease_v019_2=DOID:4929,4.16e-15,2;DOID:305,5.94e-12,106;DOID:299,8.56e-10,25;DOID:3111,9.79e-09,1;DOID:3603,9.79e-09,1;DOID:3030,1.05e-08,1;DOID:5662,1.13e-08,1;DOID:0050687,4.11e-08,143;DOID:1793,5.84e-08,4|ontology_enrichment_uberon=UBERON:0003343!5.38e-07!4;UBERON:0004785!5.38e-07!4|ontology_enrichment_uberon_v019=UBERON:0002394;1.30e-16;4!UBERON:0003928;1.30e-16;4!UBERON:0000058;1.97e-11;10!UBERON:0002294;1.03e-09;7!UBERON:0001173;1.03e-09;7!UBERON:0004913;2.25e-08;1!UBERON:0003703;2.25e-08;1!UBERON:0001174;2.25e-08;1!UBERON:0004914;2.25e-08;1!UBERON:0007195;4.56e-08;1|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.93e-11,6;UBERON:0003928,2.93e-11,6;UBERON:0004913,2.02e-08,1;UBERON:0003703,2.02e-08,1;UBERON:0001174,2.02e-08,1;UBERON:0004914,2.02e-08,1;UBERON:0007195,6.24e-08,1;UBERON:0002294,1.17e-07,9;UBERON:0001173,1.17e-07,9;UBERON:0004912,1.17e-07,9;UBERON:0007499,6.81e-07,25|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,1.20036438433761,0.515262646192195,0.257640540045629,0.18611685633159,0.675105328965065,0.0974370051611986,0.504867548488229,0.0920498986422993,0,1.42003837006646,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,2.29723871668228,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.462145851343933,0,0,0,0,0.255679882248303,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.86493381685228,0,0.307160702099232,0,0,0,0.824019371133798,0,0,0,0,3.78394125257973,0,0,3.77447074818773,3.04335996948536,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54364004611717,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0.195984794828755,0.261177619741208,0,0,0.967563312890852,0.365446585430928,1.23173185579814,0,0,0,0.548167698587004,0.19871461170299,0,0,0.961905843018405,0.426905989478705,0,0.576361668616424,0,0,0.288109595976299,1.11827282008889,0,0.407712618220842,1.04602846312333,0,1.73370353940911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.202210631562555,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0.684347351537318,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.298509605773748,0,0,0.189403005275089,0.754703705257725,0,0,0,1.08806040407946,1.18284119991707,0,0,0.155262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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C4270 | |||
|description=CAGE_peak_at_chr3:115509871..115509888,+ | |||
|id=chr3:115509871..115509888,+ | |||
|ontology_enrichment_celltype=CL:0000243!8.77e-08!15;CL:0000125!8.77e-08!15;CL:0000030!8.77e-08!15;CL:0000339!8.77e-08!15;CL:0000066!4.64e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.05e-08;1!CL:0000083;5.83e-08;4!CL:0000569;1.16e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.05e-08,1;CL:0000083,5.84e-08,4;CL:0000569,1.52e-07,4;CL:0000011,1.52e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000011;1.16e-07;4 | |||
|ontology_enrichment_disease=DOID:305!3.50e-16!106;DOID:0050687!6.13e-11!143;DOID:1749!7.15e-09!14;DOID:7!1.10e-08!39;DOID:14566!1.03e-07!239;DOID:299!1.97e-07!25;DOID:162!3.76e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:4929;4.79e-15;2!DOID:299;9.64e-10;25!DOID:3111;9.79e-09;1!DOID:3603;9.79e-09;1!DOID:3030;1.05e-08;1!DOID:5662;1.13e-08;1!DOID:1793;5.83e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,4.16e-15,2;DOID:305,5.94e-12,106;DOID:299,8.56e-10,25;DOID:3111,9.79e-09,1;DOID:3603,9.79e-09,1;DOID:3030,1.05e-08,1;DOID:5662,1.13e-08,1;DOID:0050687,4.11e-08,143;DOID:1793,5.84e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0003343!5.38e-07!4;UBERON:0004785!5.38e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002394;1.30e-16;4!UBERON:0003928;1.30e-16;4!UBERON:0000058;1.97e-11;10!UBERON:0002294;1.03e-09;7!UBERON:0001173;1.03e-09;7!UBERON:0004913;2.25e-08;1!UBERON:0003703;2.25e-08;1!UBERON:0001174;2.25e-08;1!UBERON:0004914;2.25e-08;1!UBERON:0007195;4.56e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002394,2.93e-11,6;UBERON:0003928,2.93e-11,6;UBERON:0004913,2.02e-08,1;UBERON:0003703,2.02e-08,1;UBERON:0001174,2.02e-08,1;UBERON:0004914,2.02e-08,1;UBERON:0007195,6.24e-08,1;UBERON:0002294,1.17e-07,9;UBERON:0001173,1.17e-07,9;UBERON:0004912,1.17e-07,9;UBERON:0007499,6.81e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,1.20036438433761,0.515262646192195,0.257640540045629,0.18611685633159,0.675105328965065,0.0974370051611986,0.504867548488229,0.0920498986422993,0,1.42003837006646,0,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67737398844108,2.29723871668228,0,0.144781306667579,0.410952645100767,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0.664225598535437,0.368738337083406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0.386682873168488,0.462145851343933,0,0,0,0,0.255679882248303,0.0890320356467374,0,0,0.255225424989168,0,0,0.31481234683064,0,0,0.532306030317022,0,0.18532421910392,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,2.86493381685228,0,0.307160702099232,0,0,0,0.824019371133798,0,0,0,0,3.78394125257973,0,0,3.77447074818773,3.04335996948536,0,0,0,1.11136990144637,0,0,0,0,0,0,0.1137934482855,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54364004611717,0,0,0,0,0,0.150323419414493,0,0,0.330991955875499,0.313932918407225,0,0,0.138674673013139,0,0.195984794828755,0.261177619741208,0,0,0.967563312890852,0.365446585430928,1.23173185579814,0,0,0,0.548167698587004,0.19871461170299,0,0,0.961905843018405,0.426905989478705,0,0.576361668616424,0,0,0.288109595976299,1.11827282008889,0,0.407712618220842,1.04602846312333,0,1.73370353940911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315132729228895,0.0824158583811665,0.202210631562555,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0.422401346077626,0,0,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0.684347351537318,0.704815022316672,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705797459094515,0,0,0.298509605773748,0,0,0.189403005275089,0.754703705257725,0,0,0,1.08806040407946,1.18284119991707,0,0,0.155262956876259,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,7.12741435385786,10.3542940445727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.687034029507179,0.11796972334774,0.550285795565037,4.73655231216387,0.381382095467167,0,0,0,0.40341013740704,0,0,0.327543835020193,2.80926563812386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.68803236805932,0.0679697329768317,0,0,0.667388411352415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.946656005844523,0.426067023795788,0,0.22910686854405,1.86123831398592,0,0,4.51491074630118,0.731507549893617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0.160482733378337,0,0,0,0,0,0,0,0.371995018166751,0.462175628631418,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0,0,4.70953822838576,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,1.3874554964103,0,2.78458126530419,0,0,0,0,0,0 | |||
|short_description=p@chr3:115509871..115509888,+ | |||
}} |
Revision as of 20:56, 12 September 2013
Short description: | p@chr3:115509871..115509888, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:115509871..115509888, + |
Coexpression cluster: | C4270_mucinous_pleomorphic_signet_thyroid_bile_oral_tubular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.05e-08 | 1 |
epithelial cell of pancreas | 5.84e-08 | 4 |
cardiac mesenchymal cell | 1.52e-07 | 4 |
migratory trunk neural crest cell | 1.52e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
bile duct | 2.93e-11 | 6 |
digestive system duct | 2.93e-11 | 6 |
hepatopancreatic ampulla | 2.02e-08 | 1 |
extrahepatic bile duct | 2.02e-08 | 1 |
common bile duct | 2.02e-08 | 1 |
duodenal papilla | 2.02e-08 | 1 |
stroma of bone marrow | 6.24e-08 | 1 |
biliary system | 1.17e-07 | 9 |
biliary tree | 1.17e-07 | 9 |
biliary bud | 1.17e-07 | 9 |
epithelial sac | 6.81e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 4.16e-15 | 2 |
carcinoma | 5.94e-12 | 106 |
adenocarcinoma | 8.56e-10 | 25 |
cystadenocarcinoma | 9.79e-09 | 1 |
mucinous cystadenocarcinoma | 9.79e-09 | 1 |
mucinous adenocarcinoma | 1.05e-08 | 1 |
pleomorphic carcinoma | 1.13e-08 | 1 |
cell type cancer | 4.11e-08 | 143 |
pancreatic cancer | 5.84e-08 | 4 |
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