FFCP PHASE1:Hg19::chr3:125820348..125820390,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=54946|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=31046|TSSclassifier=S|UniProt=B7Z4Y2|association_with_transcript=0bp_to_NM_001164475_5end|description=CAGE_peak_5_at_SLC41A3_5end|id=chr3:125820348..125820390,-|ontology_enrichment_celltype=CL:0000667!2.57e-09!6;CL:0000058!2.57e-09!6;CL:0000138!2.57e-09!6;CL:0000153!5.60e-08!9;CL:0000447!5.60e-08!9;CL:0005020!6.68e-08!6;CL:0002138!6.68e-08!6;CL:0005022!6.68e-08!6;CL:0002139!4.78e-07!24|ontology_enrichment_celltype_v019=CL:0000138;1.41e-25;6!CL:0000153;5.40e-17;9!CL:0000447;5.40e-17;9!CL:0000327;4.22e-10;15!CL:0000499;2.07e-07;28|ontology_enrichment_celltype_v019_2=CL:0000058,1.16e-25,6;CL:0000138,1.16e-25,6;CL:0000153,4.74e-17,9;CL:0000447,4.74e-17,9;CL:0000327,3.91e-10,15;CL:0000499,1.99e-07,28|ontology_enrichment_development_v019=UBERON:0006965;4.14e-13;2!UBERON:0010115;1.40e-07;1!UBERON:0004874;1.40e-07;1!UBERON:0006298;4.60e-07;1!UBERON:0008801;4.60e-07;1!UBERON:0006242;4.60e-07;1!UBERON:0005062;5.04e-07;4!UBERON:0007284;5.04e-07;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!9.42e-45!115;UBERON:0001049!3.92e-11!57;UBERON:0005068!3.92e-11!57;UBERON:0006241!3.92e-11!57;UBERON:0007135!3.92e-11!57;UBERON:0004111!4.09e-11!241;UBERON:0000477!1.03e-10!286;UBERON:0005743!4.47e-10!86;UBERON:0001017!7.29e-10!82;UBERON:0003075!1.03e-09!86;UBERON:0007284!1.03e-09!86;UBERON:0002346!5.79e-09!90;UBERON:0000955!9.34e-09!69;UBERON:0006238!9.34e-09!69;UBERON:0000153!1.02e-08!129;UBERON:0007811!1.02e-08!129;UBERON:0002616!1.76e-08!59;UBERON:0000073!1.91e-08!94;UBERON:0001016!1.91e-08!94;UBERON:0000033!2.00e-07!123;UBERON:0001893!6.72e-07!34;UBERON:0003080!7.76e-07!42;UBERON:0000025!8.98e-07!194|ontology_enrichment_uberon_v019=UBERON:0000341;1.84e-12;2!UBERON:0001829;1.84e-12;2!UBERON:0003978;4.24e-09;3!UBERON:0000946;4.24e-09;3!UBERON:0002363;1.40e-07;1!UBERON:0000989;1.40e-07;1!UBERON:0008811;1.40e-07;1!UBERON:0002135;1.63e-07;1!UBERON:0002146;2.22e-07;1!UBERON:0005623;2.22e-07;1!UBERON:0001831;4.60e-07;1!UBERON:0001736;4.60e-07;1!UBERON:0000996;4.60e-07;1!UBERON:0001567;4.60e-07;1|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.22e-12,2;UBERON:0001829,1.84e-12,2;UBERON:0003978,4.25e-09,3;UBERON:0009751,4.25e-09,3;UBERON:0000946,4.25e-09,3;UBERON:0002523,4.25e-09,3;UBERON:0005983,4.25e-09,3;UBERON:0002165,4.25e-09,3;UBERON:0002062,4.25e-09,3;UBERON:0007280,4.25e-09,3;UBERON:0000989,1.36e-07,1;UBERON:0008811,1.36e-07,1;UBERON:0006258,1.36e-07,1;UBERON:0005876,1.36e-07,1;UBERON:0004874,1.36e-07,1;UBERON:0002363,1.44e-07,1;UBERON:0007645,1.44e-07,1;UBERON:0007647,1.44e-07,1;UBERON:0010115,1.44e-07,1;UBERON:0002135,1.74e-07,1;UBERON:0002146,2.09e-07,1;UBERON:0005623,2.09e-07,1;UBERON:0007023,2.25e-07,114;UBERON:0001736,3.02e-07,1;UBERON:0006298,3.02e-07,1;UBERON:0000996,4.34e-07,1;UBERON:0001831,6.97e-07,1;UBERON:0001567,6.97e-07,1;UBERON:0008801,6.97e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1686349143074,2.50668955317945,3.62116297402059,5.5670016293577,6.8128881842369,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,1.13061588384802,0,0,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0,1.22031028774085,0,0,0,0.22452937262617,0,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,2.02113026865503,0.462985512576611,3.23432058798817,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718874566474748,0,0,0,0.410952645100767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,8.96615947129814,0.276283915531148,0,0.102268682502155,0,0,0,0,0,0,0,0,0.969332746095218,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0.885741385813839,0.120596438625408,0,0.221158519862449,0.886642856860642,0.87754158861589,0,0,1.92375646259493,0.113942055847001,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0,0,0.808813595768125,0.802577647298789,0.234264445725339,0,0,0,0.789168805698781,1.20990716048664,0.306072761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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=54946 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31046 | |||
|TSSclassifier=S | |||
|UniProt=B7Z4Y2 | |||
|association_with_transcript=0bp_to_NM_001164475_5end | |||
|description=CAGE_peak_5_at_SLC41A3_5end | |||
|id=chr3:125820348..125820390,- | |||
|ontology_enrichment_celltype=CL:0000667!2.57e-09!6;CL:0000058!2.57e-09!6;CL:0000138!2.57e-09!6;CL:0000153!5.60e-08!9;CL:0000447!5.60e-08!9;CL:0005020!6.68e-08!6;CL:0002138!6.68e-08!6;CL:0005022!6.68e-08!6;CL:0002139!4.78e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000138;1.41e-25;6!CL:0000153;5.40e-17;9!CL:0000447;5.40e-17;9!CL:0000327;4.22e-10;15!CL:0000499;2.07e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.16e-25,6;CL:0000138,1.16e-25,6;CL:0000153,4.74e-17,9;CL:0000447,4.74e-17,9;CL:0000327,3.91e-10,15;CL:0000499,1.99e-07,28 | |||
|ontology_enrichment_development_v019=UBERON:0006965;4.14e-13;2!UBERON:0010115;1.40e-07;1!UBERON:0004874;1.40e-07;1!UBERON:0006298;4.60e-07;1!UBERON:0008801;4.60e-07;1!UBERON:0006242;4.60e-07;1!UBERON:0005062;5.04e-07;4!UBERON:0007284;5.04e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.42e-45!115;UBERON:0001049!3.92e-11!57;UBERON:0005068!3.92e-11!57;UBERON:0006241!3.92e-11!57;UBERON:0007135!3.92e-11!57;UBERON:0004111!4.09e-11!241;UBERON:0000477!1.03e-10!286;UBERON:0005743!4.47e-10!86;UBERON:0001017!7.29e-10!82;UBERON:0003075!1.03e-09!86;UBERON:0007284!1.03e-09!86;UBERON:0002346!5.79e-09!90;UBERON:0000955!9.34e-09!69;UBERON:0006238!9.34e-09!69;UBERON:0000153!1.02e-08!129;UBERON:0007811!1.02e-08!129;UBERON:0002616!1.76e-08!59;UBERON:0000073!1.91e-08!94;UBERON:0001016!1.91e-08!94;UBERON:0000033!2.00e-07!123;UBERON:0001893!6.72e-07!34;UBERON:0003080!7.76e-07!42;UBERON:0000025!8.98e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.84e-12;2!UBERON:0001829;1.84e-12;2!UBERON:0003978;4.24e-09;3!UBERON:0000946;4.24e-09;3!UBERON:0002363;1.40e-07;1!UBERON:0000989;1.40e-07;1!UBERON:0008811;1.40e-07;1!UBERON:0002135;1.63e-07;1!UBERON:0002146;2.22e-07;1!UBERON:0005623;2.22e-07;1!UBERON:0001831;4.60e-07;1!UBERON:0001736;4.60e-07;1!UBERON:0000996;4.60e-07;1!UBERON:0001567;4.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,1.22e-12,2;UBERON:0001829,1.84e-12,2;UBERON:0003978,4.25e-09,3;UBERON:0009751,4.25e-09,3;UBERON:0000946,4.25e-09,3;UBERON:0002523,4.25e-09,3;UBERON:0005983,4.25e-09,3;UBERON:0002165,4.25e-09,3;UBERON:0002062,4.25e-09,3;UBERON:0007280,4.25e-09,3;UBERON:0000989,1.36e-07,1;UBERON:0008811,1.36e-07,1;UBERON:0006258,1.36e-07,1;UBERON:0005876,1.36e-07,1;UBERON:0004874,1.36e-07,1;UBERON:0002363,1.44e-07,1;UBERON:0007645,1.44e-07,1;UBERON:0007647,1.44e-07,1;UBERON:0010115,1.44e-07,1;UBERON:0002135,1.74e-07,1;UBERON:0002146,2.09e-07,1;UBERON:0005623,2.09e-07,1;UBERON:0007023,2.25e-07,114;UBERON:0001736,3.02e-07,1;UBERON:0006298,3.02e-07,1;UBERON:0000996,4.34e-07,1;UBERON:0001831,6.97e-07,1;UBERON:0001567,6.97e-07,1;UBERON:0008801,6.97e-07,1 | |||
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|short_description=p5@SLC41A3 | |||
}} |
Revision as of 21:18, 12 September 2013
Short description: | p5@SLC41A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SLC41A3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001164475_5end |
EntrezGene: | SLC41A3 |
HGNC: | 31046 |
UniProt: | B7Z4Y2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.16e-25 | 6 |
chondrocyte | 1.16e-25 | 6 |
GAG secreting cell | 4.74e-17 | 9 |
carbohydrate secreting cell | 4.74e-17 | 9 |
extracellular matrix secreting cell | 3.91e-10 | 15 |
stromal cell | 1.99e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
throat | 1.22e-12 | 2 |
major salivary gland | 1.84e-12 | 2 |
valve | 4.25e-09 | 3 |
cardiac mesenchyme | 4.25e-09 | 3 |
cardial valve | 4.25e-09 | 3 |
tunica intima | 4.25e-09 | 3 |
heart layer | 4.25e-09 | 3 |
endocardium | 4.25e-09 | 3 |
endocardial cushion | 4.25e-09 | 3 |
presumptive endocardium | 4.25e-09 | 3 |
penis | 1.36e-07 | 1 |
intromittent organ | 1.36e-07 | 1 |
lateral plate mesenchyme | 1.36e-07 | 1 |
undifferentiated genital tubercle | 1.36e-07 | 1 |
somatopleure | 1.36e-07 | 1 |
dura mater | 1.44e-07 | 1 |
future meninx | 1.44e-07 | 1 |
ectomeninx | 1.44e-07 | 1 |
future dura mater | 1.44e-07 | 1 |
mitral valve | 1.74e-07 | 1 |
pulmonary valve | 2.09e-07 | 1 |
semi-lunar valve | 2.09e-07 | 1 |
adult organism | 2.25e-07 | 114 |
submandibular gland | 3.02e-07 | 1 |
submandibular gland primordium | 3.02e-07 | 1 |
vagina | 4.34e-07 | 1 |
parotid gland | 6.97e-07 | 1 |
cheek | 6.97e-07 | 1 |
parotid gland primordium | 6.97e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.