FFCP PHASE1:Hg19::chr3:145910811..145910838,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr3:145910811..145910838,-|id=chr3:145910811..145910838,-|ontology_enrichment_celltype=CL:0005020!3.54e-08!6;CL:0002138!3.54e-08!6;CL:0005022!3.54e-08!6|ontology_enrichment_celltype_v019=CL:0000511;9.49e-11;1!CL:0002625;9.49e-11;1!CL:0000222;9.49e-11;1!CL:0000216;9.49e-11;1!CL:0002138;2.37e-07;6|ontology_enrichment_celltype_v019_2=CL:0000511,5.05e-11,1;CL:0002625,5.05e-11,1;CL:0000216,5.05e-11,1;CL:0005020,2.23e-07,6;CL:0002138,2.23e-07,6;CL:0005022,2.23e-07,6|ontology_enrichment_development_v019=CL:0005022;2.37e-07;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.03e-23!115;UBERON:0000477!2.03e-12!286;UBERON:0002616!1.76e-11!59;UBERON:0004111!4.89e-11!241;UBERON:0001049!2.21e-10!57;UBERON:0005068!2.21e-10!57;UBERON:0006241!2.21e-10!57;UBERON:0007135!2.21e-10!57;UBERON:0000025!2.65e-09!194;UBERON:0001017!3.92e-09!82;UBERON:0000955!6.20e-09!69;UBERON:0006238!6.20e-09!69;UBERON:0005743!8.02e-09!86;UBERON:0003075!1.02e-08!86;UBERON:0007284!1.02e-08!86;UBERON:0002346!6.64e-08!90;UBERON:0000073!4.21e-07!94;UBERON:0001016!4.21e-07!94|ontology_enrichment_uberon_v019=UBERON:0002134;3.94e-11;1!UBERON:0005208;3.94e-11;1!UBERON:0004145;3.94e-11;1!UBERON:0005946;3.94e-11;1!UBERON:0005965;3.94e-11;1!UBERON:0002078;3.94e-11;1!UBERON:0001136;9.49e-11;1!UBERON:0001343;9.49e-11;1!UBERON:0004910;9.49e-11;1!UBERON:0004813;9.49e-11;1!UBERON:0002021;1.86e-08;5!UBERON:0002298;1.96e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.41e-11,1;UBERON:0005208,3.41e-11,1;UBERON:0005946,3.41e-11,1;UBERON:0005965,3.41e-11,1;UBERON:0002078,3.41e-11,1;UBERON:0001136,5.05e-11,1;UBERON:0001343,5.05e-11,1;UBERON:0004910,5.05e-11,1;UBERON:0005154,5.05e-11,1;UBERON:0005295,5.05e-11,1;UBERON:0004813,5.05e-11,1;UBERON:0005297,5.05e-11,1;UBERON:0005294,5.05e-11,1;UBERON:0010141,5.05e-11,1;UBERON:0005891,5.05e-11,1;UBERON:0002021,1.27e-08,5;UBERON:0002298,1.96e-07,6|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0.872338524100369,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0.35576626268671,0.66944122552934,1.20848795132744,0.760272105718513,0.488124115096339,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0.490385709340376,0.151357427644931,1.15235184896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567160915800105,0,0.213557388818567,0.211931901159562,0,0.103052529238439,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0.982827216677626,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,1.38895653772983,3.04406643575357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288239906833923,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.234282829985426,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280660094433074,0.256278298511402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,0.618246069886334,0,0.082509499920588,0,0,1.6068392984416,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,0.286249773483982,0,0.632758849437452,0.190630193923825,0,0.42793898803392,0,0,0.179872457583315,0,0,0,0,0.421258456238981,0,0.487426979262569,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0.398495976502139,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0,0,0.482385754501632,0,0.110579259931225,0.295547618953547,0.87754158861589,0,0,0.307801034015188,0.227884111694002,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.067401132980677,0,0.234264445725339,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0.225980740780532,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0.279282401272254,0.4583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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr3:145910811..145910838,- | |||
|id=chr3:145910811..145910838,- | |||
|ontology_enrichment_celltype=CL:0005020!3.54e-08!6;CL:0002138!3.54e-08!6;CL:0005022!3.54e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000511;9.49e-11;1!CL:0002625;9.49e-11;1!CL:0000222;9.49e-11;1!CL:0000216;9.49e-11;1!CL:0002138;2.37e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.05e-11,1;CL:0002625,5.05e-11,1;CL:0000216,5.05e-11,1;CL:0005020,2.23e-07,6;CL:0002138,2.23e-07,6;CL:0005022,2.23e-07,6 | |||
|ontology_enrichment_development_v019=CL:0005022;2.37e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.03e-23!115;UBERON:0000477!2.03e-12!286;UBERON:0002616!1.76e-11!59;UBERON:0004111!4.89e-11!241;UBERON:0001049!2.21e-10!57;UBERON:0005068!2.21e-10!57;UBERON:0006241!2.21e-10!57;UBERON:0007135!2.21e-10!57;UBERON:0000025!2.65e-09!194;UBERON:0001017!3.92e-09!82;UBERON:0000955!6.20e-09!69;UBERON:0006238!6.20e-09!69;UBERON:0005743!8.02e-09!86;UBERON:0003075!1.02e-08!86;UBERON:0007284!1.02e-08!86;UBERON:0002346!6.64e-08!90;UBERON:0000073!4.21e-07!94;UBERON:0001016!4.21e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.94e-11;1!UBERON:0005208;3.94e-11;1!UBERON:0004145;3.94e-11;1!UBERON:0005946;3.94e-11;1!UBERON:0005965;3.94e-11;1!UBERON:0002078;3.94e-11;1!UBERON:0001136;9.49e-11;1!UBERON:0001343;9.49e-11;1!UBERON:0004910;9.49e-11;1!UBERON:0004813;9.49e-11;1!UBERON:0002021;1.86e-08;5!UBERON:0002298;1.96e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,3.41e-11,1;UBERON:0005208,3.41e-11,1;UBERON:0005946,3.41e-11,1;UBERON:0005965,3.41e-11,1;UBERON:0002078,3.41e-11,1;UBERON:0001136,5.05e-11,1;UBERON:0001343,5.05e-11,1;UBERON:0004910,5.05e-11,1;UBERON:0005154,5.05e-11,1;UBERON:0005295,5.05e-11,1;UBERON:0004813,5.05e-11,1;UBERON:0005297,5.05e-11,1;UBERON:0005294,5.05e-11,1;UBERON:0010141,5.05e-11,1;UBERON:0005891,5.05e-11,1;UBERON:0002021,1.27e-08,5;UBERON:0002298,1.96e-07,6 | |||
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|short_description=p@chr3:145910811..145910838,- | |||
}} |
Revision as of 21:56, 12 September 2013
Short description: | p@chr3:145910811..145910838, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:145910811..145910838, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.05e-11 | 1 |
seminiferous tubule epithelial cell | 5.05e-11 | 1 |
Sertoli cell | 5.05e-11 | 1 |
lymphangioblast | 2.23e-07 | 6 |
endothelial cell of lymphatic vessel | 2.23e-07 | 6 |
vascular lymphangioblast | 2.23e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 3.41e-11 | 1 |
right atrium valve | 3.41e-11 | 1 |
outflow tract of atrium | 3.41e-11 | 1 |
outflow part of right atrium | 3.41e-11 | 1 |
right cardiac atrium | 3.41e-11 | 1 |
mesothelium | 5.05e-11 | 1 |
seminiferous tubule of testis | 5.05e-11 | 1 |
epithelium of male gonad | 5.05e-11 | 1 |
epithelial cord | 5.05e-11 | 1 |
sex cord | 5.05e-11 | 1 |
seminiferous tubule epithelium | 5.05e-11 | 1 |
testis sex cord | 5.05e-11 | 1 |
genital ridge | 5.05e-11 | 1 |
primitive sex cord of indifferent gonad | 5.05e-11 | 1 |
coelomic epithelium | 5.05e-11 | 1 |
occipital lobe | 1.27e-08 | 5 |
brainstem | 1.96e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.