FFCP PHASE1:Mm9::chr12:105366205..105366212,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=271047|HGNC=|MCL_coexpression_id=25|UniProt=Q8BYY9,Q05A44|association_with_transcript=0bp_to_ENSMUST00000085052,NM_173024,uc007owu.1_5end|description=CAGE_peak_1_at_Serpina3b_5end|id=chr12:105366205..105366212,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000213,1.03e-09,1;CL:0002078,1.03e-09,1;CL:0000115,1.03e-09,1;CL:0002262,1.03e-09,1;CL:1000398,1.03e-09,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000014!1.98e-11!5;UBERON:0001003!1.98e-11!5;UBERON:0002097!1.98e-11!5;UBERON:0002199!1.98e-11!5;UBERON:0007029!1.98e-11!5;UBERON:0007376!1.98e-11!5;UBERON:0002416!1.98e-11!5;UBERON:0007383!1.98e-11!5|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.67e-45,5;UBERON:0001003,6.67e-45,5;UBERON:0002097,6.67e-45,5;UBERON:0002199,6.67e-45,5;UBERON:0007029,6.67e-45,5;UBERON:0007376,6.67e-45,5;UBERON:0002416,6.67e-45,5;UBERON:0007383,6.67e-45,5;UBERON:0003102,1.41e-19,22;UBERON:0001255,4.59e-10,1;UBERON:0001556,4.59e-10,1;UBERON:0002394,1.03e-09,1;UBERON:0001281,1.03e-09,1;UBERON:0000353,1.03e-09,1;UBERON:0003497,1.03e-09,1;UBERON:0003909,1.03e-09,1;UBERON:0003928,1.03e-09,1;UBERON:0003835,1.03e-09,1;UBERON:0003513,1.03e-09,1;UBERON:0001280,1.03e-09,1;UBERON:0004647,1.03e-09,1;UBERON:0002294,1.03e-09,1;UBERON:0001173,1.03e-09,1;UBERON:0004912,1.03e-09,1;UBERON:0005171,1.03e-09,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0.441683036920787,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0.972811360650212,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.488625294148,4.03661066739764,10.1928843128583,26.6200327126994,17.7272171724666,0,0,1.36696704638282,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0.598066184175915,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,3.28422309854724,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,1.98532277207564,0.463735671240843|short_description=p1@Serpina3b}} | ||
|EntrezGene=271047 | |||
|HGNC= | |||
|MCL_coexpression_id=25 | |||
|UniProt=Q8BYY9,Q05A44 | |||
|association_with_transcript=0bp_to_ENSMUST00000085052,NM_173024,uc007owu.1_5end | |||
|description=CAGE_peak_1_at_Serpina3b_5end | |||
|id=chr12:105366205..105366212,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,1.03e-09,1;CL:0002078,1.03e-09,1;CL:0000115,1.03e-09,1;CL:0002262,1.03e-09,1;CL:1000398,1.03e-09,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!1.98e-11!5;UBERON:0001003!1.98e-11!5;UBERON:0002097!1.98e-11!5;UBERON:0002199!1.98e-11!5;UBERON:0007029!1.98e-11!5;UBERON:0007376!1.98e-11!5;UBERON:0002416!1.98e-11!5;UBERON:0007383!1.98e-11!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,6.67e-45,5;UBERON:0001003,6.67e-45,5;UBERON:0002097,6.67e-45,5;UBERON:0002199,6.67e-45,5;UBERON:0007029,6.67e-45,5;UBERON:0007376,6.67e-45,5;UBERON:0002416,6.67e-45,5;UBERON:0007383,6.67e-45,5;UBERON:0003102,1.41e-19,22;UBERON:0001255,4.59e-10,1;UBERON:0001556,4.59e-10,1;UBERON:0002394,1.03e-09,1;UBERON:0001281,1.03e-09,1;UBERON:0000353,1.03e-09,1;UBERON:0003497,1.03e-09,1;UBERON:0003909,1.03e-09,1;UBERON:0003928,1.03e-09,1;UBERON:0003835,1.03e-09,1;UBERON:0003513,1.03e-09,1;UBERON:0001280,1.03e-09,1;UBERON:0004647,1.03e-09,1;UBERON:0002294,1.03e-09,1;UBERON:0001173,1.03e-09,1;UBERON:0004912,1.03e-09,1;UBERON:0005171,1.03e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607425802169478,0.699561878128147,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0.860423876981386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0.144599356919912,1.76922110389975,0,0.441683036920787,0,0,0,0,0,0.239630249011841,0,0.127070227073065,0,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241177159752417,0,0.287696137450811,0.972811360650212,0.274561413188081,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.488625294148,4.03661066739764,10.1928843128583,26.6200327126994,17.7272171724666,0,0,1.36696704638282,0,0,0.188368457004691,0.27338845544205,0.457556346413045,0,0,0.138199973804424,0.954670618015114,0,0,0,0,0,0,0,0,0,0,0,0.598066184175915,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,3.28422309854724,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0,0,0,0.187283014939765,0.0640251524048693,0,0,0,0.192909220463705,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,1.98532277207564,0.463735671240843 | |||
|short_description=p1@Serpina3b | |||
}} |
Revision as of 22:04, 12 September 2013
Short description: | p1@Serpina3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Serpina3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:25 |
Association with transcript: | 0bp_to_ENSMUST00000085052, NM_173024, uc007owu.1_5end |
EntrezGene: | Serpina3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 1.03e-09 | 1 |
meso-epithelial cell | 1.03e-09 | 1 |
endothelial cell | 1.03e-09 | 1 |
endothelial cell of sinusoid | 1.03e-09 | 1 |
endothelial cell of hepatic sinusoid | 1.03e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
zone of skin | 6.67e-45 | 5 |
skin epidermis | 6.67e-45 | 5 |
skin of body | 6.67e-45 | 5 |
integument | 6.67e-45 | 5 |
surface | 6.67e-45 | 5 |
outer epithelium | 6.67e-45 | 5 |
integumental system | 6.67e-45 | 5 |
enveloping layer of ectoderm | 6.67e-45 | 5 |
surface structure | 1.41e-19 | 22 |
urinary bladder | 4.59e-10 | 1 |
lower urinary tract | 4.59e-10 | 1 |
bile duct | 1.03e-09 | 1 |
hepatic sinusoid | 1.03e-09 | 1 |
parenchyma | 1.03e-09 | 1 |
abdomen blood vessel | 1.03e-09 | 1 |
sinusoid | 1.03e-09 | 1 |
digestive system duct | 1.03e-09 | 1 |
abdominal segment blood vessel | 1.03e-09 | 1 |
trunk blood vessel | 1.03e-09 | 1 |
liver parenchyma | 1.03e-09 | 1 |
liver lobule | 1.03e-09 | 1 |
biliary system | 1.03e-09 | 1 |
biliary tree | 1.03e-09 | 1 |
biliary bud | 1.03e-09 | 1 |
hepatic duct | 1.03e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.